Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01063 ATGCGGGCCCTCACTTCCTTGATCTTCGCTTTAGTATCCGTCGTTTTGTCGGCGACGGTTGTCTACTCCGGCTTCCCCGTCCAACGTCTCTCTCTGCAGAGAGCCTTCCCTTCATCTCGCTCTATCGAACTTGAAACTCTCAGAGCTCGGGACCGTCTCAGGCATGCCAGAATCTTGCAAGGTGTCGTCAGTGGCGTCGTCGACTTCTCAGTCGAAGGTTCTTCCGATCCGTTGCTCGTCGGGCTTTACTTTACCAAAGTTAAATTGGGCACTCCCCCGAAGGAATTTACGGTGCAGATCGACACTGGAAGCGATATATTGTGGGTGAACTGCAATTCCTGCAATGGCTGCCCCAGAGCAAGTGGACTTGGAATTCAACTTAATTTCTTTGATGCTTCCAACTCATCAAGTTCTTCACTGGTTTCCTGCTCCGATCCAATATGCAATTCTGCATTCCAAACAACTGCGACTCAGTGTTTATCTCAGACTAATCAATGTAGTTACACCTTTCAGTATGGTGATGGAAGTGGAACATCAGGTTATTATGTATCTGAGTCCATGTACTTTGACATGGTTATGGGGCATTCTATGATTGCTAACTCTTCAGCTACAGTTGTTTTTGGTTGCAGCACATATCAGTCAGGTGACTTGACTAAATCAGACCATGCAATAGATGGCATTTTCGGATTTGGCCCCGGGGATTTGTCTGTCATATCACAGTTATCAGCTCGAGGGATAACCCCTAAAGTATTTTCCCATTGTTTAAAAGGAGAAGGAAATGGAGGTGGTATATTGGTTCTTGGAGAGGTTCTGGAGCCCGGCATTGTGTATAGCCCACTCGTCCCCTCTCAGCCTCACTATAACTTGTATCTGCAAAGCATTGCTGTCAATGGTCAGACACTGCCAATCGATCCATCTGTGTTTGCAACATCAAATAATCGAGGAACTATTGTAGACTCCGGGACAACATTGGCTTATCTTGTGGAAGAAGCTTATACGCCATTTGTCAGCGCGATAACTGCTGCTGTTTCCCAATCTGTGACTCCTACTATTTCAAAGGGCAGCCAGTGTTATCTAGTATCCACCAGTGTAGACGAGATATTTCCCATGGTTAGCTTAAATTTTGCGGCCGGTGCATCTATGGTGTTAAGACCCGAAGAATATCTTATGCATCTTGGCTTTTATGATGGTGCTGCATTATGGTGTATTGGTTTTCAGAAAGTTCAGGAAGGAGTAACAATTTTAGGAGATAAGATATTCGTATACGATTTGGCACGCCAGCAACTCGGGTGGGCAAACTATGATTGTTCTCAAGCTGTAAATGTATCGGTCACGTCCGGGAAGAACGAGTTCGTCAATGCAGGACAGCTGAGCGTGAGCGGCTCAACCCAAGATAAGCTCCTTCAATCACTAGCTATAGAAGCATTAACTCTTTTTCTGAGTTTCATTTTGTTCATCCACTTCCTGTTTCTGTAA 1476 45.33 MRALTSLIFALVSVVLSATVVYSGFPVQRLSLQRAFPSSRSIELETLRARDRLRHARILQGVVSGVVDFSVEGSSDPLLVGLYFTKVKLGTPPKEFTVQIDTGSDILWVNCNSCNGCPRASGLGIQLNFFDASNSSSSSLVSCSDPICNSAFQTTATQCLSQTNQCSYTFQYGDGSGTSGYYVSESMYFDMVMGHSMIANSSATVVFGCSTYQSGDLTKSDHAIDGIFGFGPGDLSVISQLSARGITPKVFSHCLKGEGNGGGILVLGEVLEPGIVYSPLVPSQPHYNLYLQSIAVNGQTLPIDPSVFATSNNRGTIVDSGTTLAYLVEEAYTPFVSAITAAVSQSVTPTISKGSQCYLVSTSVDEIFPMVSLNFAAGASMVLRPEEYLMHLGFYDGAALWCIGFQKVQEGVTILGDKIFVYDLARQQLGWANYDCSQAVNVSVTSGKNEFVNAGQLSVSGSTQDKLLQSLAIEALTLFLSFILFIHFLFL 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8099955 8105047 - Cp4.1LG08g10640.1 Cpe08g01063 474029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01063 491 Gene3D Acid Proteases 67 269 IPR021109 -
Cpe08g01063 491 Gene3D Acid Proteases 270 443 IPR021109 -
Cpe08g01063 491 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
Cpe08g01063 491 CDD pepsin_A_like_plant 83 436 IPR034161 -
Cpe08g01063 491 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 454 - -
Cpe08g01063 491 PANTHER ASPARTYL PROTEASES 5 454 IPR001461 GO:0004190|GO:0006508
Cpe08g01063 491 SUPERFAMILY Acid proteases 79 440 IPR021109 -
Cpe08g01063 491 Pfam Xylanase inhibitor C-terminal 286 432 IPR032799 -
Cpe08g01063 491 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Cpe08g01063 491 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Cpe08g01063 491 ProSiteProfiles Peptidase family A1 domain profile. 83 432 IPR033121 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g01063 Cpe19g00441 CCT
Cpe03g00220 Cpe08g01063 CCT
Cpe08g01063 Cpe19g00441 ECH
Cpe03g00220 Cpe08g01063 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00440 Cpe-Chr5:2526151 Cpe08g01063 Cpe-Chr8:8099955 0 dispersed
Cpe08g01063 Cpe-Chr8:8099955 Cpe17g00990 Cpe-Chr17:7513394 1.19E-102 dispersed
Cpe16g00494 Cpe-Chr16:5997256 Cpe08g01063 Cpe-Chr8:8099955 1.31E-160 wgd
Cpe19g00441 Cpe-Chr19:3927821 Cpe08g01063 Cpe-Chr8:8099955 0 wgd
Cpe03g00220 Cpe-Chr3:1095203 Cpe08g01063 Cpe-Chr8:8099955 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01063 - - cmos:111438716 899.812