Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01065 ATGTTCAAGTTTTGGGGATCTCAGGAGGAACAGGTACGTCCTCCTCAAGATGTTATCACACAATCATGGTATCCACCTTCTGTTAGCTCCTCTCGCCCTGGAACCCCAGGTAGCACCTCCTCCAGGCCACAATCTCCATCACACGTTTCACCGGCTGAAGCTGCTGGCATTATTTCTGCTTTGAAGGACAAAAGTGTTGATGAGTTACGAAAGCTATTGTCGGACAAGGATGCATATAATCAATTCCTCCTTTCACTCGACCAGATTAAAATTCAGAACAACCTAAGAGATGAGCTGCGCGAGGAAACTCTTCAGCTTGCAAGTGAGAACATGGAAAAGGAACCACGCATCATGGAACTTAGAAACCAGTGCAGAATAATCCGGACAACTGAACTGGCTGCTGCTGAGGAGAAGCTGAACGAGCTTGACCGAAAGAAGAAAGAGATCTTGAACCTCTGTTCTCCTGCTTCACTTATCCGAAGGCTTCAAGAGAGAATGAAGGAGACTGAAGAGGAGTCAGACAATCTGCACAGACAGCTCCTTGACAGAGAGATAGATTTGGGTTCTTTTACTCACAAATACAAGAAGCTGCGTATGGATTACCACCGGCGAGCTCTCATTCAACTTGCTGCTACCACCACCTGA 645 46.67 MFKFWGSQEEQVRPPQDVITQSWYPPSVSSSRPGTPGSTSSRPQSPSHVSPAEAAGIISALKDKSVDELRKLLSDKDAYNQFLLSLDQIKIQNNLRDELREETLQLASENMEKEPRIMELRNQCRIIRTTELAAAEEKLNELDRKKKEILNLCSPASLIRRLQERMKETEEESDNLHRQLLDREIDLGSFTHKYKKLRMDYHRRALIQLAATTT 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8107943 8114015 - Cp4.1LG08g10730.1 Cpe08g01065 474031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01065 214 Gene3D Helix hairpin bin 141 208 IPR029012 -
Cpe08g01065 214 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37A 3 213 - -
Cpe08g01065 214 MobiDBLite consensus disorder prediction 1 52 - -
Cpe08g01065 214 MobiDBLite consensus disorder prediction 13 48 - -
Cpe08g01065 214 Coils Coil 132 152 - -
Cpe08g01065 214 Coils Coil 92 112 - -
Cpe08g01065 214 ProSiteProfiles VPS37 C-terminal domain profile. 136 214 IPR009851 -
Cpe08g01065 214 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 3 213 - -
Cpe08g01065 214 Pfam Modifier of rudimentary (Mod(r)) protein 62 206 IPR009851 -
Cpe08g01065 214 SUPERFAMILY Endosomal sorting complex assembly domain 154 204 IPR037202 -
Cpe08g01065 214 Coils Coil 159 179 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00217 Cpe08g01065 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00217 Cpe-Chr3:1085775 Cpe08g01065 Cpe-Chr8:8107943 2.24E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01065 K12185 - csv:101204280 336.265