Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01068 ATGTCTCCGGCAATGGCGGCTGAGATGGAGAATACCATTGTATCAGAAACTCAAGTGTACCAAAAGGGTGTCAAGAATTTGGCTGACAAGGGATTGAATAAGCTCCCTCTCAAATATGTTCTCCCCAATTCCGACCGCCCTGCCGATTGCATATCCGACAACCCTAATGTGATCGGCGCCGTCGAGCTTCCTGTCATCGACTTCGTCCAACTCTGTGGCCCTAACCGCCGACACGTCCTCCGTTCCCTCTCTAAATCCTGTGAAGATTATGGCTTCTTTCAGTTGATAAACCATGGAATTTCAAGCGAAGTGATATCAAGCATGAGAGAAGTTTGCTCAAAATTCTTCGAGCTTCCATATGAGGAAAGAGCCAAATACATGTCATCCGACATGCATGCGACCGTACGTTATGGTACAAGCTTCAACCAAACCAAAGACACTGTTTTCTACTGGAGGGACTTCTTGAAGCTGACTTGCAACCCTAATCTACACCAACTTCTCTCCAATTGGCCGTCTTCTCCGGCCGCCTTCAAAGACTCGGCATCGACCTACGCCGAGCACACCCGACGCCTGTTTCTGATTCTAGTCGAAGCAATTCTCGAAAGCTTGGGAGCTATGGAGAAAGAAGAAGAGGAATTATTGAAGGAATTTGAAGAAGGAAGTCAACTAATGGTTGTTAATTGTTATCCACAATGTCCTGAGCCAGAGCTAACTCTAGGAATGCCACCACACTCTGATTATGGCTTCCTCACACTTCTCCTTCAAGATCAAGTTGAAGGGCTTCAAATTCATCACCAACAAAAATGGGTCAATGTTAAACCGATGCCTAATTGCTTTGTTGTCAACATTGGCGATCATCTCGAG 864 46.06 MSPAMAAEMENTIVSETQVYQKGVKNLADKGLNKLPLKYVLPNSDRPADCISDNPNVIGAVELPVIDFVQLCGPNRRHVLRSLSKSCEDYGFFQLINHGISSEVISSMREVCSKFFELPYEERAKYMSSDMHATVRYGTSFNQTKDTVFYWRDFLKLTCNPNLHQLLSNWPSSPAAFKDSASTYAEHTRRLFLILVEAILESLGAMEKEEEELLKEFEEGSQLMVVNCYPQCPEPELTLGMPPHSDYGFLTLLLQDQVEGLQIHHQQKWVNVKPMPNCFVVNIGDHLE 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8126840 8128184 - Cp4.1LG08g10780.1 Cpe08g01068 474034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01068 288 Coils Coil 196 216 - -
Cpe08g01068 288 Gene3D - 13 288 IPR027443 -
Cpe08g01068 288 Pfam 2OG-Fe(II) oxygenase superfamily 223 287 IPR044861 -
Cpe08g01068 288 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 164 IPR026992 -
Cpe08g01068 288 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-RELATED 18 287 - -
Cpe08g01068 288 SUPERFAMILY Clavaminate synthase-like 22 288 - -
Cpe08g01068 288 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 287 - -
Cpe08g01068 288 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 220 288 IPR005123 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01068 Cpe-Chr8:8126840 Cpe14g00014 Cpe-Chr14:83195 9.51E-58 dispersed
Cpe14g00199 Cpe-Chr14:1128060 Cpe08g01068 Cpe-Chr8:8126840 2.89E-47 transposed
Cpe03g00215 Cpe-Chr3:1076648 Cpe08g01068 Cpe-Chr8:8126840 1.91E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01068 - - csv:101220578 440.269