Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01075 ATGGATAGAGAGTGGGGGTCCAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAGAATGAAGCTATCGATCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTACTTTATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAATAATGAGGGAAATTACTTGGCGCACACGCAGGGGAAGCGCCATCAGACTAATTTGGCGAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGGAGGCCTGGTTATCGAGTAACGAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTGCTTTTCCAAATTGAATACCCAGAAATTGAAGACCTAGCAAAGCCAAGACATCGATTTATGTCCTCTTATGAGCAGCGGGTGCAACCGTTCGATAAAAGATACCAATATCTTCTATTTGCAGCTGAACCGTATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATTGACAAATCCACACCAAAATTCTTCTCTCACTGGGATCCAGACTCGAAAATGTTCACGTTGCAGTTGTATTTTAAATCCAAACCACTAGAGGCAAACAAGCCACAAACTGTGCCTGCAGCCAATGGAACGGCGCCACTGCCGCCACCACCACAAGCTCCACCACCGCCCCCACCTCCACCACAGCAAGGGGCACCACCAAGAGTTCCTCCTCCTCCGATGCCTGGATCCTTGCCGCCTCCCCCTCCTGTAATGGCAAATGGTCCTCCTAGGCCAATGCCTCCTGGTGGAGCTCCGCCCATCCCTCCACCGCCTCCAGTTGGTAATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGACTTCCCATGCCACCTCCCCCACAGGGCTTCCCAGGCCAGGGTGTCCGTCAGCCACCCCCACCGCCACCCAATATGGGTTAG 1005 51.84 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPLEANKPQTVPAANGTAPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8177316 8180297 - Cp4.1LG08g10740.1 Cpe08g01075 474041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01075 334 MobiDBLite consensus disorder prediction 307 334 - -
Cpe08g01075 334 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Cpe08g01075 334 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Cpe08g01075 334 Pfam Zinc-finger of C2H2 type 52 76 - -
Cpe08g01075 334 MobiDBLite consensus disorder prediction 219 334 - -
Cpe08g01075 334 MobiDBLite consensus disorder prediction 227 295 - -
Cpe08g01075 334 MobiDBLite consensus disorder prediction 1 21 - -
Cpe08g01075 334 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Cpe08g01075 334 SMART CactinC_cactus_3 89 214 - -
Cpe08g01075 334 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 328 - -
Cpe08g01075 334 SUPERFAMILY beta-beta-alpha zinc fingers 48 83 IPR036236 -
Cpe08g01075 334 Gene3D Classic Zinc Finger 46 89 - -
Cpe08g01075 334 Gene3D - 93 218 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01075 K12826 - csv:101202831 433.335