Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01099 ATGGCGAATAACGACATCGAAGTCGGATCTCGGGGGTCCCTGCCTAGGAAGGACTATTTCGAGCCGCTTCCGGCGCCAATGATCGATATGGAGGAGTTGGCCAAATGGTCCTTTTACAGAGCCATAATCGCCGAGTTCGTTGCCACTCTTTTGTTTCTCTACGTCACCGTTTTGACGGTCATCGGTAATAAAACCCAGACCGATCCCCTCAACGGCGGTAACCTCTGCGGCGGAGTTGGCACCCTCGGAATCGCCTGGGTCTTCGGTGGTATGATCTTCGTTCTCGTTTACTGCACCGCCGGCATCTCTGGAGGACACATAAACCCGGCGGTGACATTCGGAATGTTTCTGGGGAGAAAGATATCGTTGATTCGCGCCTTGCTCTACATTATAGCTCAGTGCTTGGGGGCGTTATGCGGCTGCGCCTTAGTCAAGTCGCTACAGAGAGATCGCTACAACCACTATGGCGGTGCCGCCAACCAACTCGTCGACGGCTACAGCAAAGGCACCGGTCTCGCCGTCGAGATCGTCGGCACCTTCGTCCTTCTCTACACCGTCTTCTCCGCCACTGATCCCAAACGCAACGCCCGAGATTCCTACGTTCCTGTGCTGGCTCCACTCCCCATTGGGTTCACTGTTTTCATGGTTCATCTCGCTACAATTCCGATCACTGGCACTGGCATCAATCCAGCTCGAAGCTTCGGCGCCGCCGTGATCATCAACGATAAACAAATTTGGAAAGATCATTGGATCTTCTGGGTCGGGCCGCTGATCGGAGCAACCATTGCTACGATGTATTACCAGTATGTTCTTCGAGCCTCCGCCGTGAAAGCAATTGGATCCTTCAAAAGCACACCACCAACGCGTTACTAA 873 53.72 MANNDIEVGSRGSLPRKDYFEPLPAPMIDMEELAKWSFYRAIIAEFVATLLFLYVTVLTVIGNKTQTDPLNGGNLCGGVGTLGIAWVFGGMIFVLVYCTAGISGGHINPAVTFGMFLGRKISLIRALLYIIAQCLGALCGCALVKSLQRDRYNHYGGAANQLVDGYSKGTGLAVEIVGTFVLLYTVFSATDPKRNARDSYVPVLAPLPIGFTVFMVHLATIPITGTGINPARSFGAAVIINDKQIWKDHWIFWVGPLIGATIATMYYQYVLRASAVKAIGSFKSTPPTRY 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8324588 8328502 + Cp4.1LG08g10990.1 Cpe08g01099 474065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01099 290 Gene3D Glycerol uptake facilitator protein. 25 288 IPR023271 -
Cpe08g01099 290 CDD MIP 40 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 SUPERFAMILY Aquaporin-like 31 272 IPR023271 -
Cpe08g01099 290 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 PRINTS Major intrinsic protein family signature 88 112 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 PRINTS Major intrinsic protein family signature 125 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 PRINTS Major intrinsic protein family signature 250 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 PANTHER AQUAPORIN PIP2-4-RELATED 6 285 - -
Cpe08g01099 290 TIGRFAM MIP: MIP family channel proteins 44 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 6 285 IPR034294 -
Cpe08g01099 290 Pfam Major intrinsic protein 33 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe08g01099 290 ProSitePatterns MIP family signature. 106 114 IPR022357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g01099 Cpe19g00410 CCT
Cpe08g01099 Cpe19g00410 ECH
Cpe08g01099 Cpe10g00216 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01099 Cpe-Chr8:8324588 Cpe10g00216 Cpe-Chr10:1223766 8.78E-137 dispersed
Cpe01g02241 Cpe-Chr1:19049402 Cpe08g01099 Cpe-Chr8:8324588 8.51E-152 wgd
Cpe10g00212 Cpe-Chr10:1212635 Cpe08g01099 Cpe-Chr8:8324588 3.58E-138 wgd
Cpe13g00804 Cpe-Chr13:7202436 Cpe08g01099 Cpe-Chr8:8324588 7.91E-15 wgd
Cpe16g00536 Cpe-Chr16:6270595 Cpe08g01099 Cpe-Chr8:8324588 6.49E-154 wgd
Cpe19g00409 Cpe-Chr19:3617325 Cpe08g01099 Cpe-Chr8:8324588 5.17E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01099 K09872 - csv:101214142 509.99