Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01100 ATGGCAACTAGGGGTCAAGGTGGTATCCAACAATTGCTTGCAGCAGAGCAAGAAGCTCAACACATTGTCAATGCTGCCAGAAATGCAAAATTGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCTGCTTACCGTGCCCAAGTGGAGGCTGAGTTCCAAAGAAAACTCTCTGAGAGTAGCGGAGATTCAGGAGCTAATGTTAAGCGGCTTGAAGTCGAGACGGATGCAAAGATTGCGCACCTAAAAGAAGAGTCTGCTAGAATTTCGTACGATGTCGTGGACATGCTCCTGAAGCATGTGACAACCGTGAAAAATTGA 330 46.06 MATRGQGGIQQLLAAEQEAQHIVNAARNAKLARLKQAKEEAEKEIAAYRAQVEAEFQRKLSESSGDSGANVKRLEVETDAKIAHLKEESARISYDVVDMLLKHVTTVKN 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8328811 8331853 + Cp4.1LG08g11040.1 Cpe08g01100 474066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01100 109 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 1 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cpe08g01100 109 Coils Coil 24 58 - -
Cpe08g01100 109 Pfam Vacuolar (H+)-ATPase G subunit 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Cpe08g01100 109 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 2 109 - -
Cpe08g01100 109 Gene3D - 1 109 - -
Cpe08g01100 109 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 2 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00178 Cpe08g01100 CCT
Cpe03g00178 Cpe08g01100 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01100 Cpe-Chr8:8328811 Cpe11g00110 Cpe-Chr11:624237 9.71E-11 dispersed
Cpe03g00178 Cpe-Chr3:880470 Cpe08g01100 Cpe-Chr8:8328811 1.08E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01100 K02152 - cmos:111461062 182.57