Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g01105 | CCCATAAAACGAAGGCCTAACTCACTCAAAACCAGAAAGCTTCAAGAGCTCAACAATGGCGGCCAAGAACAATTTCAGCCTTCTTATTCTCCTCCTCCTTGTGCAGCTGTTTTATTCAGGGCCGAACTGCAAATGAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTACTGAGCTCTACTATGAACATGGAAACACTGCCGTTTCGTGGCTTAGAAACCTCTTCCATGATTGCGTTGTTCAGTCTTGTGATGCGTCTCTACTGTTGGAGACGACTTTGAAAGGACCGCATATCGACTTGAAAACAGGAAGAAGAGATAGCAAAATGAGCTATTCGAATCTTGTTGAAGAGCTGGTCCCAAAGCACAATGAATCTCTTGTGAATGTTCTCTCGAGGTTTAAGTCTATTGGCATTGACACGGAGGCAACGGTTGCCCTTTTAGGAGCTCATTCAGTGGGTCGAGTTCACTGTGTGAACTTAGTGGAGAGGCTGTACCCAACCGTTGACCGAACCATCGATCCTAATTACGCACAATACCTAAAAGTTCGATGCCCGACGCCGAATCCTGACCCAGAAGCAGTATTGTATTCGAGAAACGACCGTGAAACTCCAATGATTCTAGACAATATGTACTACAAAAATGTTCTTGAACACAAGGGGTTGTTGATCGTGGACCAAGAATTGGTTTCCAACCCTCTTACTCTTCCCTATGTCAAGAAATTTGCAGCCGACAATAAATATTTTCACGACCAATTTGCTAGGGGAATTCGTTTGTTGTCGGAGAATAATCCGCTCACTGCCGATCAAGGTGAGATTAGAAAAGATTGTCGCTATGTTAATTAA | 864 | 42.94 | PIKRRPNSLKTRKLQELNNGGQEQFQPSYSPPPCAAVLFRAELQMNYYAKSCPKAEEIIKQQVTELYYEHGNTAVSWLRNLFHDCVVQSCDASLLLETTLKGPHIDLKTGRRDSKMSYSNLVEELVPKHNESLVNVLSRFKSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTVDRTIDPNYAQYLKVRCPTPNPDPEAVLYSRNDRETPMILDNMYYKNVLEHKGLLIVDQELVSNPLTLPYVKKFAADNKYFHDQFARGIRLLSENNPLTADQGEIRKDCRYVN | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8357747 | 8359611 | + | Cp4.1LG08g10960.1 | Cpe08g01105 | 474071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g01105 | 287 | PRINTS | Plant peroxidase signature | 76 | 96 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | PRINTS | Plant peroxidase signature | 52 | 71 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | PANTHER | PEROXIDASE 21 | 99 | 285 | - | - | |
Cpe08g01105 | 287 | Gene3D | - | 43 | 99 | - | - | |
Cpe08g01105 | 287 | PRINTS | Haem peroxidase superfamily signature | 74 | 88 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | PRINTS | Haem peroxidase superfamily signature | 149 | 164 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | PRINTS | Haem peroxidase superfamily signature | 207 | 222 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | PANTHER | PEROXIDASE 25-RELATED | 31 | 99 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | SUPERFAMILY | Heme-dependent peroxidases | 42 | 287 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | Gene3D | - | 100 | 287 | - | - | |
Cpe08g01105 | 287 | PANTHER | PEROXIDASE 25-RELATED | 99 | 285 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | PANTHER | PEROXIDASE 21 | 31 | 99 | - | - | |
Cpe08g01105 | 287 | Gene3D | Peroxidase, domain 2 | 127 | 266 | - | - | |
Cpe08g01105 | 287 | ProSiteProfiles | Plant heme peroxidase family profile. | 42 | 287 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe08g01105 | 287 | Pfam | Peroxidase | 100 | 251 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00172 | Cpe08g01105 | CCT | |
Cpe08g01105 | Cpe10g00207 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g01105 | Cpe-Chr8:8357747 | Cpe20g00365 | Cpe-Chr20:2054530 | 4.62E-79 | dispersed | |
Cpe10g00207 | Cpe-Chr10:1192530 | Cpe08g01105 | Cpe-Chr8:8357747 | 9.36E-112 | wgd | |
Cpe03g00172 | Cpe-Chr3:851765 | Cpe08g01105 | Cpe-Chr8:8357747 | 1.04E-153 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g01105 | K00430 | - | csv:101215428 | 432.95 |