Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01105 CCCATAAAACGAAGGCCTAACTCACTCAAAACCAGAAAGCTTCAAGAGCTCAACAATGGCGGCCAAGAACAATTTCAGCCTTCTTATTCTCCTCCTCCTTGTGCAGCTGTTTTATTCAGGGCCGAACTGCAAATGAATTATTATGCAAAAAGTTGCCCAAAAGCTGAAGAAATTATAAAACAGCAAGTTACTGAGCTCTACTATGAACATGGAAACACTGCCGTTTCGTGGCTTAGAAACCTCTTCCATGATTGCGTTGTTCAGTCTTGTGATGCGTCTCTACTGTTGGAGACGACTTTGAAAGGACCGCATATCGACTTGAAAACAGGAAGAAGAGATAGCAAAATGAGCTATTCGAATCTTGTTGAAGAGCTGGTCCCAAAGCACAATGAATCTCTTGTGAATGTTCTCTCGAGGTTTAAGTCTATTGGCATTGACACGGAGGCAACGGTTGCCCTTTTAGGAGCTCATTCAGTGGGTCGAGTTCACTGTGTGAACTTAGTGGAGAGGCTGTACCCAACCGTTGACCGAACCATCGATCCTAATTACGCACAATACCTAAAAGTTCGATGCCCGACGCCGAATCCTGACCCAGAAGCAGTATTGTATTCGAGAAACGACCGTGAAACTCCAATGATTCTAGACAATATGTACTACAAAAATGTTCTTGAACACAAGGGGTTGTTGATCGTGGACCAAGAATTGGTTTCCAACCCTCTTACTCTTCCCTATGTCAAGAAATTTGCAGCCGACAATAAATATTTTCACGACCAATTTGCTAGGGGAATTCGTTTGTTGTCGGAGAATAATCCGCTCACTGCCGATCAAGGTGAGATTAGAAAAGATTGTCGCTATGTTAATTAA 864 42.94 PIKRRPNSLKTRKLQELNNGGQEQFQPSYSPPPCAAVLFRAELQMNYYAKSCPKAEEIIKQQVTELYYEHGNTAVSWLRNLFHDCVVQSCDASLLLETTLKGPHIDLKTGRRDSKMSYSNLVEELVPKHNESLVNVLSRFKSIGIDTEATVALLGAHSVGRVHCVNLVERLYPTVDRTIDPNYAQYLKVRCPTPNPDPEAVLYSRNDRETPMILDNMYYKNVLEHKGLLIVDQELVSNPLTLPYVKKFAADNKYFHDQFARGIRLLSENNPLTADQGEIRKDCRYVN 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8357747 8359611 + Cp4.1LG08g10960.1 Cpe08g01105 474071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01105 287 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 PANTHER PEROXIDASE 21 99 285 - -
Cpe08g01105 287 Gene3D - 43 99 - -
Cpe08g01105 287 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 PRINTS Haem peroxidase superfamily signature 149 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 PANTHER PEROXIDASE 25-RELATED 31 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 SUPERFAMILY Heme-dependent peroxidases 42 287 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 Gene3D - 100 287 - -
Cpe08g01105 287 PANTHER PEROXIDASE 25-RELATED 99 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 PANTHER PEROXIDASE 21 31 99 - -
Cpe08g01105 287 Gene3D Peroxidase, domain 2 127 266 - -
Cpe08g01105 287 ProSiteProfiles Plant heme peroxidase family profile. 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe08g01105 287 Pfam Peroxidase 100 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00172 Cpe08g01105 CCT
Cpe08g01105 Cpe10g00207 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01105 Cpe-Chr8:8357747 Cpe20g00365 Cpe-Chr20:2054530 4.62E-79 dispersed
Cpe10g00207 Cpe-Chr10:1192530 Cpe08g01105 Cpe-Chr8:8357747 9.36E-112 wgd
Cpe03g00172 Cpe-Chr3:851765 Cpe08g01105 Cpe-Chr8:8357747 1.04E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01105 K00430 - csv:101215428 432.95