Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01125 ATGTCTCCTTTGCTCAGATGCCAGCTAAAGTATTCTGTATATTGTGGATTAGGTTTTATAAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGATGACATTGGTCTGGAATGGGTTCCAGATATTCATGTTCGTTTTGGAGAAGCAATTAACCTATCTGTTGCAAATGAGACGAGGAAGCAATACAGGACCTTAAGACACTTCCCTGCTGATTCCAGGAAGTACTGTTACTCACTCAATGTCACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTGTATGGTAACTTCGACAACAATAACGTGTATCCAAAATTTGACATTTCCCTCGGGGCAACTCACTGGACAACAATTGTCATATCTGACGCCAACACCATAAAGGTTCGAGAGATCATATTTCTGGCTTCAACTCCTACTGTGAGTGTTTGTTTGTCAAATGCCACAACTGGGCAGCCGTTCATATCCACGCTTGAGCTTCGACAATTTAATGGCTCTATCTACTATACTGAATTTGAGGATCAGTTTTACCTAAGTGTCTCGGCAAGGATCAATTTTGGAGCAGATTCCGAAGCCCCAGTAAGGTATCCTGATGACCCTTTTGACCGGATATGGGAGTCTGACTCTGTGAGAAAAGCAAATTATCTTGTTGATGTTGCTGCTGGTACTGAAAAAGTTTCCACTAAAATGCCAATAAATGTCAATAGAGATGAAAGACCACCTCAAAAAGTTATGCAGACGGCTGTAGTTGGCAGAAATGGTTCATTAACTTACCGTTTGAATTTGGATGGTTTCCCTGGCTTTGGATGGGCATTCACCTACTTTGCAGAAATTGAAGACTTGGGTCCTACTGATACGAGAAAATTCAGGCTTGTACTTCCCGGCATGCCTGAAATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGAAAATACCGGCTTTATGAGCCTGGTTTTACCAACATAACCTTCCCTTTTGTATTATCTTTTAGGTTTGGGAAAACATCAGATTCTGTGTTGGGACCTCTGTTAAATGCCATGGAGATTAACAAGTATCTTGAAAAAAGTGATGGTTCTCTTGATGGAGCAGTTGTTGCTAGTGTAATTTCAAAATTATCATCTTCAGATTTGGATGAAGGTGGTGATCCATGCATGCCAGTTCCTTGGTCATGGTTGCAGTGTAACTCTGATCCACAGCCAAGAATAGTTAAAATTTTATTGTCCAAAAAGAATTTGACAGGGAACATCCCTACAGACGTTGCAAAGTTGAACAGTTTAGTTGAATTGTGGCTTGATGGAAATTCATTTGTTGGTCCTATACCCGATTTTACTGGCTGTGTGAACTTGAAAATCCTCCATCTTGAGAACAATCAGTTGACGGGAGAGTTGCCTTCCTCATTAGTAAATCTTCCTAGTTTACGGGAGCTGTATGTGCAGAATAACATGTTATCTGGAACAGTGCCTTCCGGTCGTCTAAAAAAGGATCTAACTTTAGTCTACTCTGGAAACATTAATCTTCATGAAGGGGGGAAAAAGAACCACATTTATATCATTTTGGGTTCTGTAATTGGTGCTCTTGTCCTGCTATTGGCAACTGTGGTATCTTGCTACTTTTTGCAAAGAAGAAGAAGAAGAAAATCTCGTGAGCAAGCTGATGTACTCGAAGAATCCAAGCCTGCACAAAAATTTGCCTCTTCAAAGGGCGATGCTCCCAAGGAAACTGCACATTGCTTCAGTGTTAAAGAAATTGAAGAAGCAACAAGAGGTTTTGAAAGAAAAATTGGGTCTGGAGGTTTTGGTGTTGTATACTACGGGAAATTAAATGATGGAAAAGAAATTGCAGTTAAGGTCTTGACTAGTAACTCCTTCCAGGGAAAGCGAGAATTTACAAATGAGGTGACTCTTCTTTCAAGGATTCATCACAGAAATCTTGTACAATTTCTTGGATATTGTCAAGAAGTAGATAGAAGTATGCTTGTCTACGAGTATATGCACAATGGAACTCTCAAGGAACATCTTTATGCTCCACTAACACGTGGAAAAACTATCAGTTGGATAAAGCGCCTTCAGATTGCTGAAGACGCTGCCAGAGGGATCGAATACCTTCACACAGGGTGTATACCGGCAATTATTCATAGGGACTTGAAAAGCAGTAATATTCTTCTTGACCGACACATGAGAGCAAAGGTTTCAGATTTCGGTCTGTCAAAGCTTGCCGTGGATGGCGCCTCCCACGTGTCCAGCATTGTTCGGGGGACTGTTGGATACTTGGATCCAGAGTATTATATTTCTCAGCAATTGACCGACAAGAGTGATGTATATAGTTTTGGCGTTATTCTTCTCGAGTTGATATCTGGTCAAGAAGCTATATCGAACGTAAACTTCGGTGCTAATTGCCGCAACATCGTTCAGTGGGCAAAGCTACACATCGAGAGCGGCGACATTCAAGGGATCATCGATCCATCCCTACGCTTCGAGTACGACATTCAATCTATGTGGAAAATTGCAGAGAAGGCGTTGATGTGTGCCCAGCCACATGGGCACCTGAGGCCATCCATGTCTGAAGTGCTTAAGGAGATACAGGATTCTATCTTGATTGAAAGAGAACCTCTTGCAAGAGAAGGTAACTCTGACGAAATTTCTGGAAATTCAGTCCATTCTATGAATATAGGACCTCTTGATTTGCGTGCAAACGAAAACTACGTGTCGTTTGACGAATCCATTGCTCGACCTCTTGCAAGGTAG 2751 41.44 MSPLLRCQLKYSVYCGLGFISLDCGGQESFTDDIGLEWVPDIHVRFGEAINLSVANETRKQYRTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWTTIVISDANTIKVREIIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSIYYTEFEDQFYLSVSARINFGADSEAPVRYPDDPFDRIWESDSVRKANYLVDVAAGTEKVSTKMPINVNRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAFTYFAEIEDLGPTDTRKFRLVLPGMPEISKAVVNIEENAQGKYRLYEPGFTNITFPFVLSFRFGKTSDSVLGPLLNAMEINKYLEKSDGSLDGAVVASVISKLSSSDLDEGGDPCMPVPWSWLQCNSDPQPRIVKILLSKKNLTGNIPTDVAKLNSLVELWLDGNSFVGPIPDFTGCVNLKILHLENNQLTGELPSSLVNLPSLRELYVQNNMLSGTVPSGRLKKDLTLVYSGNINLHEGGKKNHIYIILGSVIGALVLLLATVVSCYFLQRRRRRKSREQADVLEESKPAQKFASSKGDAPKETAHCFSVKEIEEATRGFERKIGSGGFGVVYYGKLNDGKEIAVKVLTSNSFQGKREFTNEVTLLSRIHHRNLVQFLGYCQEVDRSMLVYEYMHNGTLKEHLYAPLTRGKTISWIKRLQIAEDAARGIEYLHTGCIPAIIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGANCRNIVQWAKLHIESGDIQGIIDPSLRFEYDIQSMWKIAEKALMCAQPHGHLRPSMSEVLKEIQDSILIEREPLAREGNSDEISGNSVHSMNIGPLDLRANENYVSFDESIARPLAR 916
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8446306 8453053 - Cp4.1LG08g11280.1 Cpe08g01125 474091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01125 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
Cpe08g01125 916 ProSiteProfiles Protein kinase domain profile. 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01125 916 PANTHER OS07G0107800 PROTEIN-RELATED 10 900 - -
Cpe08g01125 916 Pfam Malectin-like domain 22 352 IPR024788 -
Cpe08g01125 916 Gene3D Phosphorylase Kinase; domain 1 564 665 - -
Cpe08g01125 916 PANTHER TYROSINE KINASE DOMAIN PROTEIN 10 900 - -
Cpe08g01125 916 Pfam Protein tyrosine and serine/threonine kinase 592 796 IPR001245 GO:0004672|GO:0006468
Cpe08g01125 916 SUPERFAMILY L domain-like 388 494 - -
Cpe08g01125 916 Gene3D Transferase(Phosphotransferase) domain 1 666 876 - -
Cpe08g01125 916 Pfam Leucine rich repeat 445 485 IPR001611 GO:0005515
Cpe08g01125 916 CDD STKc_IRAK 596 863 - -
Cpe08g01125 916 MobiDBLite consensus disorder prediction 550 573 - -
Cpe08g01125 916 SMART serkin_6 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01125 916 Gene3D Ribonuclease Inhibitor 365 514 IPR032675 -
Cpe08g01125 916 SUPERFAMILY Protein kinase-like (PK-like) 577 864 IPR011009 -
Cpe08g01125 916 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01589 Cpe-Chr1:9713540 Cpe08g01125 Cpe-Chr8:8446306 0 dispersed
Cpe08g01125 Cpe-Chr8:8446306 Cpe09g00565 Cpe-Chr9:3899379 0 dispersed
Cpe14g00713 Cpe-Chr14:4720960 Cpe08g01125 Cpe-Chr8:8446306 1.66E-73 dispersed
Cpe03g00155 Cpe-Chr3:780043 Cpe08g01125 Cpe-Chr8:8446306 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62565 PF12819 Malectin_like 6.40E-77 CL0202 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01125 - - csv:101212456 1619.36