Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01134 ATGGTTAAACCCTGCTGGAAATCCCATGATGATGGTGATTCGAACGGACGAGTCGATGGACTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTCATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCATTGAGTATGTCCAATCCAGGTCCACAGGGGACCTTCATCGGAGTTTATGACGGTCATGGTGGAACTGAAGCTTCACGGTTCGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTGCACCAGAACATATCGGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGATTTCTCTCTCTCGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTGGGGATCATATGCAACGGACAGCTATATATTGCCAATGCAGGTGATTCGCGAGTAGTGCTCGGGAGAACTGAGAGAGCCACTAAAGAAATCATTGCCATTCAATTGTCCACAGAGCACAATGCGGGCATAGAATCAGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCTCAGATTGTGATCCTAAAACACAATGTTTGGCGTGTTAAAGGTATCATACAGGTAATTTCCTGA 660 45.15 MVKPCWKSHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMSNPGPQGTFIGVYDGHGGTEASRFVNDNLFSNLKRYASLHQNISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATKEIIAIQLSTEHNAGIESVRDELRMVHPEDPQIVILKHNVWRVKGIIQVIS 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8492012 8494283 - Cp4.1LG08g11340.1 Cpe08g01134 474100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01134 219 Pfam Protein phosphatase 2C 61 182 IPR001932 -
Cpe08g01134 219 SMART PP2C_4 12 218 IPR001932 -
Cpe08g01134 219 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Cpe08g01134 219 ProSiteProfiles PPM-type phosphatase domain profile. 34 219 IPR001932 -
Cpe08g01134 219 PANTHER PROTEIN PHOSPHATASE 2C 67-RELATED 3 217 - -
Cpe08g01134 219 CDD PP2Cc 32 217 IPR001932 -
Cpe08g01134 219 PANTHER ALPHABET, ISOFORM E-RELATED 3 217 - -
Cpe08g01134 219 SUPERFAMILY PP2C-like 32 216 IPR036457 -
Cpe08g01134 219 Gene3D - 21 219 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01134 Cpe-Chr8:8492012 Cpe10g00688 Cpe-Chr10:3957063 4.68E-105 dispersed
Cpe01g01128 Cpe-Chr1:6676303 Cpe08g01134 Cpe-Chr8:8492012 2.04E-104 wgd
Cpe01g00222 Cpe-Chr1:1248672 Cpe08g01134 Cpe-Chr8:8492012 5.14E-105 wgd
Cpe03g00147 Cpe-Chr3:742758 Cpe08g01134 Cpe-Chr8:8492012 1.18E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01134 K01102 - csv:101210750 429.098