Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g01153 | ATGGGAGAAGAAGCACCTGGTTTGGTTGCAGTTGCAAATAAGCCGCTGGAGAAAGAGAGCGCTTCGAGTACCGAATTGAAGCGTGACCATCAGTATCTCGATGAAGATACGGAACCTGAGTCGTTTCACAATAAGAAGCAGGCAAAAGAAGTGTCGAATGAAGACGTTCGGTCAGAAGTTTCTAATCCTGTAATTTCTCCGAAAGGGAATCATTTCCAAGATATTACCAGTCAGCCAGACGAGCAAGAAAATACCAACCAAGTTGAGCGTGGGGACCTTACGTCGGCTTGTTCGGGAAATTCAAGCTCAGAGGATACCTCAAGCGATGGAGTTCGTTGCCAGAACAACACGTCTCGGAATGAAGTTGATGTGTGTGATGATGATGAAGTCTCCCGGGTTGTGATTGAAATTCCTAAGCATGCTAGTTCAACTGGAATTAAGAAAATTACGTTCAAATTCAGCAAAAAAAAGGACAACAATGACGCATCCAGGTCAGCTGACAAAGTTCATTCTTATGGAAACTCTGACAAGGACTGTAAACCCGAACCATCCTCGGTTGACGATGCTTATACGGAGACATCTGCACATAGCTGGGAAGGCTGTGCTGAGAGCAGCAGGTTTCCTCCAGGCCCCAGTAAAATGGAACTGAAAATGTCGAAGAAGGTTTTGCCAAACAATTACCCGTCAAATGTGAAAAAGCTGCTGTCTACTGGTATACTTGACGGAGCTCGCGTCAAGTATATATCTACGACAAGCGAGATAAAGCTAGATGGTATCATAAACGGCGGAGGTTATATGTGCGGATGTTCAATATGCAATTTTACAACTATTCTCAGTGCTTATGAGTTTGAGCAGCATGCTGGTTTCAAAACTAGACATCCAAATAATCATATATACTTGGAGAATGGGAGGCCGATTTATAGTGTTATACAGGAAATTAAGAGTGCACCTCTTAGCATTTTAGATGAAGTGATTAAGGAAGTAGCGGGTTCATCTGTTAACATGGATTCATTTGAGGCTTGGCAAGCAAGTTTCCACAAGGACAGTTCAGGCATTGAAGTGGAAAATGATAATGTGAAGCTTCCTAAATTGTCACATCCCATTGAGAGACTGAACCCTAATTTATCCAACCCAGTCATGCAACAGAAGAAATCGGCGGAGAAAGGCACAAAAAGAAGGGACAATGATCTTCACAGGCTACTTTTCATGCCAAATGGGCTTCCAGATGGGGCTGAGCTAGCTTACTTTGTCAAAGGACAGAGAATACTTGGAGGCTACAAGCAAGGAAATGGTATACTCTGTAGTCACTGTAATCGCGAGATTAGCCCTTCACAGTTCGAAGCCCATGCAGGGATGGCTGCCAGACGTCAACCCTACCGTCACATTTATACTACAAATGGTCTTACACTTCATGATATTGCCATTTCCCTGGCTAGTGGGCAAAAACTTTCATCAGGAGACAGTGATGATATGTGTGCTGCATGTGGTAATGGAGGGGATTTGATTTTCTGTGATCGATGTCCTCGAGCTTTCCACACAGNGGGGGGGAATATCATCTTGTTCTTTCCAGGGTGCCTGCATCTACAGAATGTCCCAGAAGGTGTTTGGTGTTGCCCAAACTGTAGAGACAAAGTGGGTTCCAGTTTGAAGGCAGCTTCCGGAGGCCCTTCGAGTTTTCCAAAACCAATTGTATTTAGGTTGACACGAGTTGTTAAAGCACCTGAGTATGAGATTGGTGGTTGTGTTGTTTGCAGGCGACATGATTTCAGCGCTGCTAAATTTGATGATCGAACTGTACTGTTATGTGATCAATGTGAAAGAGAATTCCATGTGGGCTGTCTGCGGGATAGTGGATTATGTGATCTGCAGGAACTCCCCAAGGATAAGTGGTTCTGCTGTGATGAGTGCAGTAATATCCATGTGGTCCTTCAGAATACAGTTTTGAACGGGGCACAAATTATTCCAGATTCATTATCAGATTTAATAATCAGAAAGCACGTTGGAAAAGGATTATTTGTTGATGAAGCTCTTAATGATGTTCGGTGGCAAATTTTAAGTGGAAAAAGTCGCTACCCAGAAGATCTTCCATTTCTTTCAAGGGCAACTTCTATTTTTCGAGAATGTTTTGATCCTATTGTTGCAAAATCAGGTCGTGATCTGATACCCGTTATGGTTTATGGGAGAAATATATCTGGACAAGAGTTCGGAGGAATGTATTGTGTTGTTTTAATTGTGAGGTCTATAGTTGTATCGGCTGGTCTTCTTAGGATCTTTGGCCGTGAAGTTGCTGAGCTTCCTATTGTTGCCACAAGTAGAGAACATCAGGGCAAGGGTTACTTCCAAGTATTGTTTTCCTGTATAGAGCGACTACTTTCTTCCCTAAATGTGCAAAACCTTGTACTCCCTGCAGCCGAGGATGCTGAATCAATCTGGACCAATAAATTGGGTTTCAGAAAAATGAGTGAAGAACAATTGGCGAAGTATATGAGGGAGGTCCAGCTGACGATCTTCAATGGGACATCGATGCTAGAGAAGGTGGTGCAGCGGTCAACATGA | 2556 | 43.31 | MGEEAPGLVAVANKPLEKESASSTELKRDHQYLDEDTEPESFHNKKQAKEVSNEDVRSEVSNPVISPKGNHFQDITSQPDEQENTNQVERGDLTSACSGNSSSEDTSSDGVRCQNNTSRNEVDVCDDDEVSRVVIEIPKHASSTGIKKITFKFSKKKDNNDASRSADKVHSYGNSDKDCKPEPSSVDDAYTETSAHSWEGCAESSRFPPGPSKMELKMSKKVLPNNYPSNVKKLLSTGILDGARVKYISTTSEIKLDGIINGGGYMCGCSICNFTTILSAYEFEQHAGFKTRHPNNHIYLENGRPIYSVIQEIKSAPLSILDEVIKEVAGSSVNMDSFEAWQASFHKDSSGIEVENDNVKLPKLSHPIERLNPNLSNPVMQQKKSAEKGTKRRDNDLHRLLFMPNGLPDGAELAYFVKGQRILGGYKQGNGILCSHCNREISPSQFEAHAGMAARRQPYRHIYTTNGLTLHDIAISLASGQKLSSGDSDDMCAACGNGGDLIFCDRCPRAFHTXGGNIILFFPGCLHLQNVPEGVWCCPNCRDKVGSSLKAASGGPSSFPKPIVFRLTRVVKAPEYEIGGCVVCRRHDFSAAKFDDRTVLLCDQCEREFHVGCLRDSGLCDLQELPKDKWFCCDECSNIHVVLQNTVLNGAQIIPDSLSDLIIRKHVGKGLFVDEALNDVRWQILSGKSRYPEDLPFLSRATSIFRECFDPIVAKSGRDLIPVMVYGRNISGQEFGGMYCVVLIVRSIVVSAGLLRIFGREVAELPIVATSREHQGKGYFQVLFSCIERLLSSLNVQNLVLPAAEDAESIWTNKLGFRKMSEEQLAKYMREVQLTIFNGTSMLEKVVQRST | 851 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8575977 | 8583115 | - | Cp4.1LG08g11550.1 | Cpe08g01153 | 474119 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g01153 | 851 | MobiDBLite | consensus disorder prediction | 158 | 185 | - | - | |
Cpe08g01153 | 851 | Pfam | Tify domain binding domain | 258 | 312 | IPR032308 | - | |
Cpe08g01153 | 851 | Pfam | Tify domain binding domain | 425 | 474 | IPR032308 | - | |
Cpe08g01153 | 851 | PANTHER | AUTOIMMUNE REGULATOR | 33 | 351 | - | - | |
Cpe08g01153 | 851 | PANTHER | AUTOIMMUNE REGULATOR | 365 | 848 | - | - | |
Cpe08g01153 | 851 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 736 | 823 | IPR016181 | - | |
Cpe08g01153 | 851 | MobiDBLite | consensus disorder prediction | 20 | 56 | - | - | |
Cpe08g01153 | 851 | SMART | PHD_3 | 580 | 637 | IPR001965 | - | |
Cpe08g01153 | 851 | SMART | PHD_3 | 491 | 542 | IPR001965 | - | |
Cpe08g01153 | 851 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 579 | 639 | IPR013083 | - | |
Cpe08g01153 | 851 | SUPERFAMILY | FYVE/PHD zinc finger | 487 | 545 | IPR011011 | - | |
Cpe08g01153 | 851 | MobiDBLite | consensus disorder prediction | 158 | 191 | - | - | |
Cpe08g01153 | 851 | MobiDBLite | consensus disorder prediction | 372 | 393 | - | - | |
Cpe08g01153 | 851 | ProSitePatterns | Zinc finger PHD-type signature. | 581 | 636 | IPR019786 | - | |
Cpe08g01153 | 851 | PANTHER | ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN | 33 | 351 | - | - | |
Cpe08g01153 | 851 | PANTHER | ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN | 365 | 848 | - | - | |
Cpe08g01153 | 851 | SUPERFAMILY | FYVE/PHD zinc finger | 579 | 637 | IPR011011 | - | |
Cpe08g01153 | 851 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 480 | 560 | IPR013083 | - | |
Cpe08g01153 | 851 | Gene3D | - | 683 | 847 | - | - | |
Cpe08g01153 | 851 | ProSiteProfiles | Zinc finger PHD-type profile. | 578 | 639 | IPR019787 | - | |
Cpe08g01153 | 851 | MobiDBLite | consensus disorder prediction | 1 | 123 | - | - | |
Cpe08g01153 | 851 | MobiDBLite | consensus disorder prediction | 57 | 120 | - | - | |
Cpe08g01153 | 851 | ProSiteProfiles | Zinc finger PHD-type profile. | 489 | 544 | IPR019787 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00132 | Cpe08g01153 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00901 | Cpe-Chr5:5948305 | Cpe08g01153 | Cpe-Chr8:8575977 | 2.52E-41 | dispersed | |
Cpe08g01153 | Cpe-Chr8:8575977 | Cpe09g00545 | Cpe-Chr9:3661149 | 0 | dispersed | |
Cpe01g01104 | Cpe-Chr1:6521592 | Cpe08g01153 | Cpe-Chr8:8575977 | 2.27E-38 | wgd | |
Cpe01g00193 | Cpe-Chr1:1091374 | Cpe08g01153 | Cpe-Chr8:8575977 | 2.68E-42 | wgd | |
Cpe03g00132 | Cpe-Chr3:661351 | Cpe08g01153 | Cpe-Chr8:8575977 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g01153 | - | - | cmax:111481523 | 1530.38 |