Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01153 ATGGGAGAAGAAGCACCTGGTTTGGTTGCAGTTGCAAATAAGCCGCTGGAGAAAGAGAGCGCTTCGAGTACCGAATTGAAGCGTGACCATCAGTATCTCGATGAAGATACGGAACCTGAGTCGTTTCACAATAAGAAGCAGGCAAAAGAAGTGTCGAATGAAGACGTTCGGTCAGAAGTTTCTAATCCTGTAATTTCTCCGAAAGGGAATCATTTCCAAGATATTACCAGTCAGCCAGACGAGCAAGAAAATACCAACCAAGTTGAGCGTGGGGACCTTACGTCGGCTTGTTCGGGAAATTCAAGCTCAGAGGATACCTCAAGCGATGGAGTTCGTTGCCAGAACAACACGTCTCGGAATGAAGTTGATGTGTGTGATGATGATGAAGTCTCCCGGGTTGTGATTGAAATTCCTAAGCATGCTAGTTCAACTGGAATTAAGAAAATTACGTTCAAATTCAGCAAAAAAAAGGACAACAATGACGCATCCAGGTCAGCTGACAAAGTTCATTCTTATGGAAACTCTGACAAGGACTGTAAACCCGAACCATCCTCGGTTGACGATGCTTATACGGAGACATCTGCACATAGCTGGGAAGGCTGTGCTGAGAGCAGCAGGTTTCCTCCAGGCCCCAGTAAAATGGAACTGAAAATGTCGAAGAAGGTTTTGCCAAACAATTACCCGTCAAATGTGAAAAAGCTGCTGTCTACTGGTATACTTGACGGAGCTCGCGTCAAGTATATATCTACGACAAGCGAGATAAAGCTAGATGGTATCATAAACGGCGGAGGTTATATGTGCGGATGTTCAATATGCAATTTTACAACTATTCTCAGTGCTTATGAGTTTGAGCAGCATGCTGGTTTCAAAACTAGACATCCAAATAATCATATATACTTGGAGAATGGGAGGCCGATTTATAGTGTTATACAGGAAATTAAGAGTGCACCTCTTAGCATTTTAGATGAAGTGATTAAGGAAGTAGCGGGTTCATCTGTTAACATGGATTCATTTGAGGCTTGGCAAGCAAGTTTCCACAAGGACAGTTCAGGCATTGAAGTGGAAAATGATAATGTGAAGCTTCCTAAATTGTCACATCCCATTGAGAGACTGAACCCTAATTTATCCAACCCAGTCATGCAACAGAAGAAATCGGCGGAGAAAGGCACAAAAAGAAGGGACAATGATCTTCACAGGCTACTTTTCATGCCAAATGGGCTTCCAGATGGGGCTGAGCTAGCTTACTTTGTCAAAGGACAGAGAATACTTGGAGGCTACAAGCAAGGAAATGGTATACTCTGTAGTCACTGTAATCGCGAGATTAGCCCTTCACAGTTCGAAGCCCATGCAGGGATGGCTGCCAGACGTCAACCCTACCGTCACATTTATACTACAAATGGTCTTACACTTCATGATATTGCCATTTCCCTGGCTAGTGGGCAAAAACTTTCATCAGGAGACAGTGATGATATGTGTGCTGCATGTGGTAATGGAGGGGATTTGATTTTCTGTGATCGATGTCCTCGAGCTTTCCACACAGNGGGGGGGAATATCATCTTGTTCTTTCCAGGGTGCCTGCATCTACAGAATGTCCCAGAAGGTGTTTGGTGTTGCCCAAACTGTAGAGACAAAGTGGGTTCCAGTTTGAAGGCAGCTTCCGGAGGCCCTTCGAGTTTTCCAAAACCAATTGTATTTAGGTTGACACGAGTTGTTAAAGCACCTGAGTATGAGATTGGTGGTTGTGTTGTTTGCAGGCGACATGATTTCAGCGCTGCTAAATTTGATGATCGAACTGTACTGTTATGTGATCAATGTGAAAGAGAATTCCATGTGGGCTGTCTGCGGGATAGTGGATTATGTGATCTGCAGGAACTCCCCAAGGATAAGTGGTTCTGCTGTGATGAGTGCAGTAATATCCATGTGGTCCTTCAGAATACAGTTTTGAACGGGGCACAAATTATTCCAGATTCATTATCAGATTTAATAATCAGAAAGCACGTTGGAAAAGGATTATTTGTTGATGAAGCTCTTAATGATGTTCGGTGGCAAATTTTAAGTGGAAAAAGTCGCTACCCAGAAGATCTTCCATTTCTTTCAAGGGCAACTTCTATTTTTCGAGAATGTTTTGATCCTATTGTTGCAAAATCAGGTCGTGATCTGATACCCGTTATGGTTTATGGGAGAAATATATCTGGACAAGAGTTCGGAGGAATGTATTGTGTTGTTTTAATTGTGAGGTCTATAGTTGTATCGGCTGGTCTTCTTAGGATCTTTGGCCGTGAAGTTGCTGAGCTTCCTATTGTTGCCACAAGTAGAGAACATCAGGGCAAGGGTTACTTCCAAGTATTGTTTTCCTGTATAGAGCGACTACTTTCTTCCCTAAATGTGCAAAACCTTGTACTCCCTGCAGCCGAGGATGCTGAATCAATCTGGACCAATAAATTGGGTTTCAGAAAAATGAGTGAAGAACAATTGGCGAAGTATATGAGGGAGGTCCAGCTGACGATCTTCAATGGGACATCGATGCTAGAGAAGGTGGTGCAGCGGTCAACATGA 2556 43.31 MGEEAPGLVAVANKPLEKESASSTELKRDHQYLDEDTEPESFHNKKQAKEVSNEDVRSEVSNPVISPKGNHFQDITSQPDEQENTNQVERGDLTSACSGNSSSEDTSSDGVRCQNNTSRNEVDVCDDDEVSRVVIEIPKHASSTGIKKITFKFSKKKDNNDASRSADKVHSYGNSDKDCKPEPSSVDDAYTETSAHSWEGCAESSRFPPGPSKMELKMSKKVLPNNYPSNVKKLLSTGILDGARVKYISTTSEIKLDGIINGGGYMCGCSICNFTTILSAYEFEQHAGFKTRHPNNHIYLENGRPIYSVIQEIKSAPLSILDEVIKEVAGSSVNMDSFEAWQASFHKDSSGIEVENDNVKLPKLSHPIERLNPNLSNPVMQQKKSAEKGTKRRDNDLHRLLFMPNGLPDGAELAYFVKGQRILGGYKQGNGILCSHCNREISPSQFEAHAGMAARRQPYRHIYTTNGLTLHDIAISLASGQKLSSGDSDDMCAACGNGGDLIFCDRCPRAFHTXGGNIILFFPGCLHLQNVPEGVWCCPNCRDKVGSSLKAASGGPSSFPKPIVFRLTRVVKAPEYEIGGCVVCRRHDFSAAKFDDRTVLLCDQCEREFHVGCLRDSGLCDLQELPKDKWFCCDECSNIHVVLQNTVLNGAQIIPDSLSDLIIRKHVGKGLFVDEALNDVRWQILSGKSRYPEDLPFLSRATSIFRECFDPIVAKSGRDLIPVMVYGRNISGQEFGGMYCVVLIVRSIVVSAGLLRIFGREVAELPIVATSREHQGKGYFQVLFSCIERLLSSLNVQNLVLPAAEDAESIWTNKLGFRKMSEEQLAKYMREVQLTIFNGTSMLEKVVQRST 851
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 8575977 8583115 - Cp4.1LG08g11550.1 Cpe08g01153 474119
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01153 851 MobiDBLite consensus disorder prediction 158 185 - -
Cpe08g01153 851 Pfam Tify domain binding domain 258 312 IPR032308 -
Cpe08g01153 851 Pfam Tify domain binding domain 425 474 IPR032308 -
Cpe08g01153 851 PANTHER AUTOIMMUNE REGULATOR 33 351 - -
Cpe08g01153 851 PANTHER AUTOIMMUNE REGULATOR 365 848 - -
Cpe08g01153 851 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 736 823 IPR016181 -
Cpe08g01153 851 MobiDBLite consensus disorder prediction 20 56 - -
Cpe08g01153 851 SMART PHD_3 580 637 IPR001965 -
Cpe08g01153 851 SMART PHD_3 491 542 IPR001965 -
Cpe08g01153 851 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 579 639 IPR013083 -
Cpe08g01153 851 SUPERFAMILY FYVE/PHD zinc finger 487 545 IPR011011 -
Cpe08g01153 851 MobiDBLite consensus disorder prediction 158 191 - -
Cpe08g01153 851 MobiDBLite consensus disorder prediction 372 393 - -
Cpe08g01153 851 ProSitePatterns Zinc finger PHD-type signature. 581 636 IPR019786 -
Cpe08g01153 851 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 33 351 - -
Cpe08g01153 851 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 365 848 - -
Cpe08g01153 851 SUPERFAMILY FYVE/PHD zinc finger 579 637 IPR011011 -
Cpe08g01153 851 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 480 560 IPR013083 -
Cpe08g01153 851 Gene3D - 683 847 - -
Cpe08g01153 851 ProSiteProfiles Zinc finger PHD-type profile. 578 639 IPR019787 -
Cpe08g01153 851 MobiDBLite consensus disorder prediction 1 123 - -
Cpe08g01153 851 MobiDBLite consensus disorder prediction 57 120 - -
Cpe08g01153 851 ProSiteProfiles Zinc finger PHD-type profile. 489 544 IPR019787 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe03g00132 Cpe08g01153 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00901 Cpe-Chr5:5948305 Cpe08g01153 Cpe-Chr8:8575977 2.52E-41 dispersed
Cpe08g01153 Cpe-Chr8:8575977 Cpe09g00545 Cpe-Chr9:3661149 0 dispersed
Cpe01g01104 Cpe-Chr1:6521592 Cpe08g01153 Cpe-Chr8:8575977 2.27E-38 wgd
Cpe01g00193 Cpe-Chr1:1091374 Cpe08g01153 Cpe-Chr8:8575977 2.68E-42 wgd
Cpe03g00132 Cpe-Chr3:661351 Cpe08g01153 Cpe-Chr8:8575977 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01153 - - cmax:111481523 1530.38