Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01167 ATGGATCCACGCCTTAGACGACATGGTGGTTCCATGAACGGAATTCTTTTAGATAATGGTTCTTTTTTGGTTCAATCACAAGAGGATGGTATTGGGTCTATATTTCAGAATACCATTATGAGTCATAGCTTCCAAGAATTTAATTGCCTTCCTCCTGATCCATCACCGAGTAATATAGCCTCAAGTTCCAGCGTTATCACCTCATCTTCGAATGATGCGAGTCACGAGGAGGATTATCTGGAAGATTGCGATTTTTCTGATGCTGTTTTGAGATTTATAAATCAGATTCTCATGGAAGAAGATATGGAGGACAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCCGCTGAGAAACCATTCTACGAGGTTCTCGGGAAAAAGTATCCTCCTTCCCCGGAGCCAAATAGATCTCTGGCCAATCAATACAGTGATGGGTTCAATGAAGAACTTTGTGGAGATAGTAGTAATTACCTGATTGGTTACAATAATACTTCTTATTATGGTGATGATAACGCTTTTGAAACTCAGAGTGGAGATGTGTTTCGAATCAGAAGCACTTTAGGTGATACTATTTCTCCATCATCTAATAGCTCCTCAAATAGGATAACTAATGGGGCTGATGGGTGGGTGGACTTCTCGAATAATGCAATTCGAGTCCCTGAGCCTAACAACAGAAGCCAATCTATTTGGCAGTTCCAAAAAGGGCTTGAAGAGGCTAGCAAATTTTTACCCGGTGGAAACAACTTGTGTCTTGATTTTGAGGGAAACGAGTCAGCAACTCAGGGTTTGGATGAGGGAACGAGCCAGATGTATGTGAAGTCTGCAAGAAATGATCAGAGGAAGAATTTGTCGCTTGAGTCACGAGTAAGAAAGAATCTGCATGATGAGGATGGAGATTTGGAAGAAGAGAGAAGCAGCAAGCAAGCAGCTATATCTACCGAGTCAACCTTGCGATCTAAGATGTTTGATATTGTGTTGCTTTGTAGTGCAGGGGAGGGGCACGATCGGTTAGTTTCATTTCGACAGGAATTACAGAATGCTAAAATCAAAAGCATGCTGCAGACTGGGCAACTAAAAGAGTCTAATGGTGGGAGAGGTCGTCGGAAGAAGCAAAGTGGGAAAAAGGAGGTTGTGGATTTGAGAACGCTTCTGATTAGCTGTGCTCAAGCTGTTGCAGCTGATGACCATAGGAATGCTAGTGAGCTTCTAAAGCAGGTCAGGCAACATGCTTCTCCCTTTGGAGATGGAAATCAGAGACTGGCGAGTTATTTTGCCGATGGTCTGGAGGCACGCTTGGCAGGTACTGGTAGCCAAATTTACAAAGGTCTAATTAATAAAAGAACATCTGCTGCTGATGTTTTGAAAGCCTATCACCTGTATCTTGCGGCATGCCCATTTAGGAAGATCTCTAATTTTACTTCAAACAGGACTACAATGATTGCTTCTGAGACTGCAACTAAGCTTCACGTCATAGATTTTGGTATTCTTTATGGTTTTCAGTGGCCTACTTTAATCCAGAGACTGTCATGGAGAAAAGGAGGACCTCCAAAGCTTCGGATTACTGGAATAGAATTTCCCCAGCCTGGCTTCCGTCCAGCAGAGAGAGTTGAGGAGACAGGCCGTCGGTTGGCAGCCTATGCAGAGACTTTTAACGTGCCATTTGAGTATAATGCCATAGCAAAAAAATGGGAAACTATTACAGTTGAAGATCTCAATATCGATCAGGGTGAGTTCATAGTTGTTAATTGTTTGTATCGAGCTAAAAATTTGCTTGAGGAGAGTGTTACTACAGAGAGTCCTAGAAATACTGTTCTTAGATTGATACACAAAATTAATCCTAACTTATTCATCACTGGCGTTGTCAATGGGGCATACAATGCTCCTTTCTTCGTTACCAGATTTCGAGAGGCCTTGTTTCACTTTTCTGCTATCTTTGATATGCTTGAAACTGTTGTACCTCGTGAGGATTGGGAGAGAATGCTATTGGAGAGAGAGATCTTTGGTAGGGAGGCTTTAAACGTTACAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAATGGCAATTCCGGATCATGAGGGCTGGATTTGAGCAACTTCCTTTTCATCCTGAGATTTTTGAGAGGGCTGTTGAAAAGGTGCGGTCAAGTTACCACAGAGATTTTTTGATTGATGAAGATAGTAGATGGATACTTCAGGGATGGAAAGGTCGAATTATATATGCCATCTCTGCATGGAAACCTACTCAAGAGTGA 2274 42.26 MDPRLRRHGGSMNGILLDNGSFLVQSQEDGIGSIFQNTIMSHSFQEFNCLPPDPSPSNIASSSSVITSSSNDASHEEDYLEDCDFSDAVLRFINQILMEEDMEDKTCMLQDSLDLQAAEKPFYEVLGKKYPPSPEPNRSLANQYSDGFNEELCGDSSNYLIGYNNTSYYGDDNAFETQSGDVFRIRSTLGDTISPSSNSSSNRITNGADGWVDFSNNAIRVPEPNNRSQSIWQFQKGLEEASKFLPGGNNLCLDFEGNESATQGLDEGTSQMYVKSARNDQRKNLSLESRVRKNLHDEDGDLEEERSSKQAAISTESTLRSKMFDIVLLCSAGEGHDRLVSFRQELQNAKIKSMLQTGQLKESNGGRGRRKKQSGKKEVVDLRTLLISCAQAVAADDHRNASELLKQVRQHASPFGDGNQRLASYFADGLEARLAGTGSQIYKGLINKRTSAADVLKAYHLYLAACPFRKISNFTSNRTTMIASETATKLHVIDFGILYGFQWPTLIQRLSWRKGGPPKLRITGIEFPQPGFRPAERVEETGRRLAAYAETFNVPFEYNAIAKKWETITVEDLNIDQGEFIVVNCLYRAKNLLEESVTTESPRNTVLRLIHKINPNLFITGVVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERMLLEREIFGREALNVTACEGWERVERPETYKQWQFRIMRAGFEQLPFHPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWKPTQE 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8658812 8661085 + Cp4.1LG08g11630.1 Cpe08g01167 474133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01167 757 MobiDBLite consensus disorder prediction 356 376 - -
Cpe08g01167 757 MobiDBLite consensus disorder prediction 52 73 - -
Cpe08g01167 757 ProSiteProfiles GRAS family profile. 373 753 IPR005202 -
Cpe08g01167 757 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 39 754 IPR005202 -
Cpe08g01167 757 MobiDBLite consensus disorder prediction 277 314 - -
Cpe08g01167 757 Pfam GRAS domain family 382 753 IPR005202 -
Cpe08g01167 757 PANTHER SCARECROW-LIKE PROTEIN 9 39 754 - -
Cpe08g01167 757 MobiDBLite consensus disorder prediction 281 310 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00113 Cpe08g01167 CCT
Cpe03g00113 Cpe08g01167 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01222 Cpe-Chr2:11052449 Cpe08g01167 Cpe-Chr8:8658812 0 dispersed
Cpe08g01167 Cpe-Chr8:8658812 Cpe16g00391 Cpe-Chr16:5492187 1.99E-72 dispersed
Cpe16g00623 Cpe-Chr16:6751531 Cpe08g01167 Cpe-Chr8:8658812 0 wgd
Cpe20g00829 Cpe-Chr20:7491328 Cpe08g01167 Cpe-Chr8:8658812 2.41E-138 wgd
Cpe03g00113 Cpe-Chr3:570245 Cpe08g01167 Cpe-Chr8:8658812 0 wgd
Cpe05g00928 Cpe-Chr5:6099157 Cpe08g01167 Cpe-Chr8:8658812 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49922 PF03514 GRAS 1.00E-115 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01167 - - csv:101205887 1254.97