Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01201 ATGCTTCAAATCCGGCTTAGCAAAGTTCCACAGGCGGAAGGTGGCGCTGGAACAGTGAAGCCCTTGCAAGCTGAGACTGTGACGGTCGCATGCCCTGACCACCTTATCCTTGCTGATCTTCCTGTGGCAAATGGCATTGGTGCAGCTACTGCTGCTTCCATTGTTAAGTCTGTTGGTCGCAGATCTCGCCGTCACCTTGGAGAACGAGTTCATTTTTGTGTCAGATGCGATTTTCCCATTGCAGTTTATGGTCGCCTGAAGCGATTCTATATGCTACCTGTAAGTAAAAATGCTTTGAAAGTCTTAAAATGGCTGTTATGTTGTGATGACCGTATCCAGAAGATTCAAACTATAAAATTGATGGAGGGGATCTTCATTTGTGCAGCCCCACATTGTCTCAAGTCTTTTCTTAAGAGGACTGAATTTGAATCTCATATACAAGAGAGTCATGCTGACCTTCTTAAGCCAAATGCAGAGAAGGAAGATGGAAACGAAATTGAGGCTCTTAGTGCCAAACAATCTACAGCTTCTGAATCCACTGTCCGAGGTCCATCGAGACCAATCATATCTCCAAGTTCCAATTCCCTGGCTCAAGAACGTGACGAAAAATTTCATCGTCAACAATCTAGAGACCAACCCACGTCTGGCATGCAGCAACAAGACAGCGGTGGTCATTCACAAGGCTTTGATCGACATGGTCCTCATGGCCATTTTCCCCCACAAAACTTTGACGTACAGGGTACTCCACATCAGGAATCCAGTCAATTTTCAGAGAAACAGCAGGGAATTCTGGCCGACCCTCCATATTCTCAGTACCCTCCTTTGCAATCAATTCCGCCACCGAATTACGTGGTTCCAGCTAACTCAAATCCAATGTTGAGTCCCCCTCTACCGTTCGGTTTTCCTCCGTTTCCAACTGAGGGAGCACAACAATATTACAGTACACCCTATGAAGTGCCACGACAAGATACCGCAGCAGAGACTGGATCCGAGCAAGGGTCACTGCTAGGCTTTCCACCAGGAGCAGCAGGAGGAATGAACTTCTCGGCGACTTATCCTCAACCTTGGAATACTGGACAAGCTGGCGTTCCTTATGAGCATGCTGCTGGAGGTCAAGGAATGCCTGATACTTTTGCTAATGCACCTGATTCTCAAGTAAATCATGGATTTTACCAAGGAGATTATAGACGCAGCCCTGGAGGCTTGCCTGTGAATTCTTCTGTCTCGTCAATGGCCAACAAGAGCATGGACCTGGGGCATTCTGGTAATGCCATGGACTTGAAGAATGGTAGAGGTATATTGGCACCACAGCCGCCTCTAGCACAACTTCCTCTGCCTCCGCCACTCCCACTGTACTTGTCGCATAATAAGCGTGGCAAGTTTCATTCAGGAGATACGGATCATGATGGGCAAGGCCATGGATGGCAGAATGATAGCCATAGCCGAGATAGCTTTGGAAATGGCCAAGACTGA 1473 47.52 MLQIRLSKVPQAEGGAGTVKPLQAETVTVACPDHLILADLPVANGIGAATAASIVKSVGRRSRRHLGERVHFCVRCDFPIAVYGRLKRFYMLPVSKNALKVLKWLLCCDDRIQKIQTIKLMEGIFICAAPHCLKSFLKRTEFESHIQESHADLLKPNAEKEDGNEIEALSAKQSTASESTVRGPSRPIISPSSNSLAQERDEKFHRQQSRDQPTSGMQQQDSGGHSQGFDRHGPHGHFPPQNFDVQGTPHQESSQFSEKQQGILADPPYSQYPPLQSIPPPNYVVPANSNPMLSPPLPFGFPPFPTEGAQQYYSTPYEVPRQDTAAETGSEQGSLLGFPPGAAGGMNFSATYPQPWNTGQAGVPYEHAAGGQGMPDTFANAPDSQVNHGFYQGDYRRSPGGLPVNSSVSSMANKSMDLGHSGNAMDLKNGRGILAPQPPLAQLPLPPPLPLYLSHNKRGKFHSGDTDHDGQGHGWQNDSHSRDSFGNGQD 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8814222 8816514 + Cp4.1LG08g12030.1 Cpe08g01201 474167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01201 490 ProSitePatterns Zinc finger C2H2 type domain signature. 127 150 IPR013087 -
Cpe08g01201 490 MobiDBLite consensus disorder prediction 152 259 - -
Cpe08g01201 490 MobiDBLite consensus disorder prediction 322 341 - -
Cpe08g01201 490 MobiDBLite consensus disorder prediction 152 167 - -
Cpe08g01201 490 MobiDBLite consensus disorder prediction 439 490 - -
Cpe08g01201 490 MobiDBLite consensus disorder prediction 210 226 - -
Cpe08g01201 490 MobiDBLite consensus disorder prediction 244 259 - -
Cpe08g01201 490 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 457 - -
Cpe08g01201 490 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 457 IPR040383 GO:0016567|GO:0061630
Cpe08g01201 490 MobiDBLite consensus disorder prediction 458 476 - -
Cpe08g01201 490 MobiDBLite consensus disorder prediction 168 197 - -
Cpe08g01201 490 ProSiteProfiles Zinc finger C2H2 type domain profile. 125 151 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00074 Cpe08g01201 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00074 Cpe-Chr3:399718 Cpe08g01201 Cpe-Chr8:8814222 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01201 K15685 - csv:101220422 698.738