Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01220 ATGGGGAACACTCGCAGCAATGTGAAGCGGATTCTGTGTATATTTTTGTATAATATCTTTTTGATGTCTATGATGTCAGGTTTGGCAAAATACACACCAACCTCTGGAAATGAATCGGATCGCTTGGCTCTACTTGACTTAAAAAGTAAAGTATTCAACGACCGACTTGGAATCATGAGTGCTTGGAACGATTCCATGCATTTTTGCGATTGGGTTGGCGTTTCTTGCAATCAAAGCATCAGAAGAGTTGTGGGTTTGAGCTTGGAAGCTCGAAAGCTGAGTGGTTCGATACCACCTTCTCTGGGGAATCTTACTTATCTCACTGAAATCAGATTGGGAGACAACAACTTGCATGGCCAAATTCCCCAAGAGTTTGGTCGACTGCTACGATTGCGTCATCTCAATTTGTCTTTTAATAACTTCAGTGGTGAGATTCCAGTGAATATAAGTCATTGCACTGAGCTGGTTGTTCTGACAATTGGTGCCAATAGGCTTGAAGGTCAAATTCCATCCCAATTCTTCACGTTAACCAAGTTGGAGCTTCTCGGGTTTGGTGTCAACAATTTGACTGGAACTATCCCACCTTGGATAGGTAATTTTTCTTCAATGCTTCGTTTGTCATTCGCAAAGAACAACTTTCAAGGAGACATTCCCAATGGAGTTGGACGTCTGCATAGATTGAAATTCTTCACAGTTTATGGAAACTACTTCACAGGGTCAGTGCCGCTTTCAATCTATAATATAACTTCTTTGAATTATTTTTCTGTTACTCAGAATCGATTGCAAGTCCTAGTACCACCAAATAATGGATTTTCTCTTCCCAATCTTCAGATTTTTTATGGTGCTATCAACAATTTCAACGGGCCTATTCCCACGTTTTTTGCGAATGCCTCAAGTCTTCAAGAAATAGATCTTTCTGAGAATAATTTCACTGGTAAAATACCTGAGGACCTGGGGAACTTAAACGACTTGGTGTTACTAAATTTTGATGACAATAGACTTGGAACTGGGAAAGTTGGTGACTTGAGTTTTATCAGTTCCTTGACTAATTGTACCAGTCTAAGCATACTGGGTGCTGCTGGGAATCATTTTGGTGGAGTATTGCCTCCATCTATTACCAACTTGTCAGACCAATTCACAAGCCTAACCTTAGGTGAAAATATGTTAAGTGGAGGCCTTCCAGTAGGGATTGAAAACTTGATTAACTTGCAAGTTTTCGCTGTGGAAAATAACTACTTGAATGGTAGTGTCCCTCTCAATGTTGGTAAGCTTCAAAACTTGGCCAAATTGTATTTGCAAGGTAACAAACTAAGTGGGCCAATTCCATCATCCATTGGTAACTTGTCCTTGATCATCGAGCTTCGTTTGAATGATAACGAACTTGATGGAAGTATACCACCAAGCTTAGGACGATGCAAAAGACTTCAAGCTCTTGACCTATCTAATAATAAGCTAAGTGGTACCATACCCGAGGAAGTTCTCAGTCTCCCTTCCCTTTCACTCTTTTTGGCCTTGGCTCAGAACTCACTCACTGGTCCATTACCAGCTCAAGTGGGAGAATTAATTAGTTTATCTGAGTTGGATCTGTCAGAGAACATGTTATCAGGAAATATTCCCGAAGACCTTGGTAAATGTATTGGCCTGATTCATTTGTTTTTGGATCATAACCTATTTGAGGGAACAATTCCTCAATCTTTGGAAGCTTTGAAAGGTCTAGAAGCACTTGATCTTTCAAGCAACAACTTGTCTGGGCCAATTCCCCAATTTCTTGACCAGTTTCTTGCACTCAAGTATCTCAATCTATCCTATAATAGTCTATGTGGTGGTTTTCAACACTTACATTTACCTTCATGCATGCCTAACCCAACACATTCATCCAACAAGTTTCTGACAAAAAAGGTGTTAGCCTGTACAATATCTACAGTCACATCTGCCATTGTTATTTTGAGCATCCTTCTTGTGTGTTTAATGCTTAAGAAGTCGAGGAAGAATGCTTCGAATTCATCTTCCAACTCCAAGGATTTTCTATTGCAAGTTTCCTACTTACAACTCAGTAGATCAACTGACGGGTTCTCTAGAGACAATTTGATTGGTTCAGGTAGTTTCGGTTCTGTGTATAAAGGTTCTCTGTCAAATGATGGATTGATTGTTGCAATCAAAGTTGTAAACCTCCAACAAGAAGGTGCTTCCAAAAGTTTTGTTGATGAATGCAAAGCTCTTGCAAATATACGACATCGAAATCTACTAAAGATCATAACTTCTGTCTCGAGCATCGATGGACAAGGCAATGAGTTTAAAGCTCTAGTTTTCGATTTCATGTCCAATGGAAACTTGGACCGTTGGCTTCACCCTACAAATCAAGGGGAGAATCAAAGAAGGTTGAGTCTTATCCAGAGACTAAATAGTGCCATTGATATTGCTTGTGCATTAGATTATCTTCACAATCATTGCGAAACACCTATTGTTCACTGTGATCTAAAGCCTAGCAATGTATTGCTGGACGATGATATGGTAGCCCATGTAGGGGACTTTGGTTTAGCAAGATTCATGTTGGAAGGCTCAAATGATCAATCATCTTTCAGCCAAACCATGTCACTTGCGCTTAAGGGGTCGATCGGGTATATCCCTCCAGAGTATGCCACTGGTGGTAGAGTTTCCAGTGAAGGAGATATTTTCAGCTACGGAATACTACTATTGGAGATGATCATTGGAAAAAGACCCACAGACAGCGCGTTTCACAGTGGCGTAGATATTCATATGTTCACTTCAATGGCATTGTCTCATGGAGCGTTGGCCATAATTGACCCTTATTTGCTATATGAAGAAACACGTTGTCAAGAAGAAGAGAAGGAAGATAGAATACAAGAAATAGCAATAATGATGGGTGAAGATAATCATGGTAGAGAAACTGTACCAAGATGGATGGAGGAATGTGTAGTTTCAATAATGAGAATTGGGTTATCATGCTCTTCAACTGTGCCTCGAGAAAGAACGTCCATGAATATGGTTGTTGACGAATTGCAGAAAATAAGAAGCTGCTATCTCAAGTTTAAGAAGGCACTGGGTTCCTGA 3072 40.04 MGNTRSNVKRILCIFLYNIFLMSMMSGLAKYTPTSGNESDRLALLDLKSKVFNDRLGIMSAWNDSMHFCDWVGVSCNQSIRRVVGLSLEARKLSGSIPPSLGNLTYLTEIRLGDNNLHGQIPQEFGRLLRLRHLNLSFNNFSGEIPVNISHCTELVVLTIGANRLEGQIPSQFFTLTKLELLGFGVNNLTGTIPPWIGNFSSMLRLSFAKNNFQGDIPNGVGRLHRLKFFTVYGNYFTGSVPLSIYNITSLNYFSVTQNRLQVLVPPNNGFSLPNLQIFYGAINNFNGPIPTFFANASSLQEIDLSENNFTGKIPEDLGNLNDLVLLNFDDNRLGTGKVGDLSFISSLTNCTSLSILGAAGNHFGGVLPPSITNLSDQFTSLTLGENMLSGGLPVGIENLINLQVFAVENNYLNGSVPLNVGKLQNLAKLYLQGNKLSGPIPSSIGNLSLIIELRLNDNELDGSIPPSLGRCKRLQALDLSNNKLSGTIPEEVLSLPSLSLFLALAQNSLTGPLPAQVGELISLSELDLSENMLSGNIPEDLGKCIGLIHLFLDHNLFEGTIPQSLEALKGLEALDLSSNNLSGPIPQFLDQFLALKYLNLSYNSLCGGFQHLHLPSCMPNPTHSSNKFLTKKVLACTISTVTSAIVILSILLVCLMLKKSRKNASNSSSNSKDFLLQVSYLQLSRSTDGFSRDNLIGSGSFGSVYKGSLSNDGLIVAIKVVNLQQEGASKSFVDECKALANIRHRNLLKIITSVSSIDGQGNEFKALVFDFMSNGNLDRWLHPTNQGENQRRLSLIQRLNSAIDIACALDYLHNHCETPIVHCDLKPSNVLLDDDMVAHVGDFGLARFMLEGSNDQSSFSQTMSLALKGSIGYIPPEYATGGRVSSEGDIFSYGILLLEMIIGKRPTDSAFHSGVDIHMFTSMALSHGALAIIDPYLLYEETRCQEEEKEDRIQEIAIMMGEDNHGRETVPRWMEECVVSIMRIGLSCSSTVPRERTSMNMVVDELQKIRSCYLKFKKALGS 1023
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8898365 8901738 + Cp4.1LG08g12010.1 Cpe08g01220 474186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01220 1023 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 34 1011 - -
Cpe08g01220 1023 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 34 1011 - -
Cpe08g01220 1023 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Cpe08g01220 1023 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515
Cpe08g01220 1023 Pfam Leucine Rich Repeat 299 321 IPR001611 GO:0005515
Cpe08g01220 1023 Gene3D Transferase(Phosphotransferase) domain 1 773 1019 - -
Cpe08g01220 1023 Gene3D Phosphorylase Kinase; domain 1 653 772 - -
Cpe08g01220 1023 Gene3D Ribonuclease Inhibitor 36 187 IPR032675 -
Cpe08g01220 1023 Gene3D Ribonuclease Inhibitor 342 641 IPR032675 -
Cpe08g01220 1023 ProSiteProfiles Protein kinase domain profile. 691 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01220 1023 Gene3D Ribonuclease Inhibitor 267 341 IPR032675 -
Cpe08g01220 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Cpe08g01220 1023 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Cpe08g01220 1023 SMART serkin_6 691 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01220 1023 PRINTS Leucine-rich repeat signature 475 488 - -
Cpe08g01220 1023 PRINTS Leucine-rich repeat signature 569 582 - -
Cpe08g01220 1023 Pfam Protein kinase domain 692 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01220 1023 Pfam Leucine rich repeat 426 485 IPR001611 GO:0005515
Cpe08g01220 1023 Pfam Leucine rich repeat 549 606 IPR001611 GO:0005515
Cpe08g01220 1023 SUPERFAMILY RNI-like 267 626 - -
Cpe08g01220 1023 SUPERFAMILY L domain-like 37 334 - -
Cpe08g01220 1023 Gene3D Ribonuclease Inhibitor 188 266 IPR032675 -
Cpe08g01220 1023 SMART LRR_typ_2 424 448 IPR003591 -
Cpe08g01220 1023 SMART LRR_typ_2 521 545 IPR003591 -
Cpe08g01220 1023 SMART LRR_typ_2 128 152 IPR003591 -
Cpe08g01220 1023 SMART LRR_typ_2 472 496 IPR003591 -
Cpe08g01220 1023 SMART LRR_typ_2 569 593 IPR003591 -
Cpe08g01220 1023 SUPERFAMILY Protein kinase-like (PK-like) 667 1007 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01220 Cpe-Chr8:8898365 Cpe11g00132 Cpe-Chr11:720957 0 dispersed
Cpe13g00500 Cpe-Chr13:5132461 Cpe08g01220 Cpe-Chr8:8898365 1.19E-85 transposed
Cpe13g01068 Cpe-Chr13:8663203 Cpe08g01220 Cpe-Chr8:8898365 3.66E-07 wgd
Cpe03g00060 Cpe-Chr3:318285 Cpe08g01220 Cpe-Chr8:8898365 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62569 PF00069 Pkinase 6.10E-40 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01220 - - cpep:111800314 1870.13