Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01237 ATGAGATATGCTAAATGCGTAACCAAACAACCCGATTGCAGCGAATTTGGGGGGAGAGCTGACCGTGGAGTACTTTACAAGCTTCACTCATCGGAGGAAAAACGTCGGCGATGGCGATTGATAGGGTTTGAAGGAAGACGTGAAATCCAATTTAGAAATGGACATGGATATCGACGAAAATTCGACAGCCAAAGATCCGTCGTAAACGATGGAGATTCTTTCTTTTGCGATTTTCGTAACGATGAGTGTCTGTATTTTAAAGGAAATGAACGGCGAACGAAGCTCATAATGGTGATATTAGTGGGCGCACCTGGAAGCGGAAAGTCCACCTTCTGCGAACTCGTAATGGCCTCCTCTTCTCGCCCTTGGGTTCGAATCTGCCAGGATACCATTGGAAATGGCAAGTCCGGAACGAAAGCACAGTGTTTGAAGAGTGCAGCCAGTGCATTGAATGATGGAAAGAGTGTATTTGTGGACAGGTGCAATCTTGAAATAGAGCAGCGTTCTGAGTTTGTGAAACTAGGTAGCTCTCTAGTGGATGTACATGCTGTTGTATTGGATCTTCCTGCACAGCTCTGTATCTCCCGTTCGGTTAAGCGGACCGGTCATGAAGGGAACCTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCGAACCTGAATGAAGGGTTCAAGCGTATAACGTTTTGTCACAGTGAAACGGAAGTTCAATCCGCTATAGATACGTATAAATCACTTGGTTTACATGATGCACTTCCAGATGGATGTTTTGGACAGAAGAATGCAGACAAGAAAGTGCAATTAGGCATAATGAGGTTCTTAAAGAAAGCAGAAAATCCTGCTAAAACATGTTCTAATGCCAATACCAATAAGGATTTTCCAAGTTCTCAAACTACCCAGGAAAAGAAAGAGTCTTCCTGCACGATGTTGAGCAATGTCAATAAAGAGTCGGAGAAAGGCGAAAAACCAGGCGTTAGATCCTTAGAAAACAATATTTCTGAAAGTGATTCCCCAACACTTGCATTTCCTTCTATTTCAACGTCGGATTTCAAGTTCAGCCATGAAAAGGCTGCTGAAATTATTGTTGAGATGGTGGAGGAATTCATGGATAAGCTTGGGAATGCCAGACTTGTTATGGTAGACTTGAGTCATGGATCAAAGATTTTGTCTCTAGTTAAAGCTAAAGCGGCCAAGAAAAATATTTGTTCCACCAAGTTTTTTACATTTGTAGGTGATATAACTAAACTCAAGTCAGATGGTGGATTGCACTGCAATGTAATAGCCAATGCTGCAAACTGGTATGCTTGTGACATATTTATGCGATTGAAACCAGGAGGGGGTGGTGTCAATGCAGCAATTTTTAGTGCTGCAGGTCCCAGTCTGGAAGAGGCAACAAAACAACAAGCCAAGTCCCTTCGACCTGGCAATGTTGTGGCCGTTCAATTGCCTTCAACTTCTCCTTTGTTTAATAGGGAAGGGGTAACCCATGTCATACATGTTCTTGGACCAAACATGAATCCTCAAAGACCAAATTATCTCAACAATGATTATGATGAAGGTTGCAAGCTTCTTCGTGATGCTTATTCTTCTCTATTTCAAGCCTTTATTTCAATAGTAAAAGATGAGTTTAAGTCGGCGAAGGGAATTGACGAACGCCTCGGCTCAGCACCTTCAGAATCACGAAAACACTCCGAGGACACCCATCACAAGTTTAAGAGAGCGGAGTTGCAAATTCCTGAAAGAAGCAAAAAGTGGAAAGGAACTCAGGAATCAGCTGAAGCATTAAACCAAAACAACAATAAGATTTCCCATAAGATGAGTAAGCACTGGGGCTCATGGGCACAAGCACTTTACAACACTGCAATGTATCCCGAGAGACATGCTAATACTGTACTGGAGACATCAGATGATGTTGTAGTACTGAATGATATTTATCCAAAAGCACGCAAACATCTTCTGATAGTGGCTCGATATGAAGGCCTCGATCAACTAGCTGATGTACATAAAGAACACCTTCCACTGTTGAAGACGATGCACGCCGTGGGTATGAAGTGGATTGATAAGTTCATTCATGACGATGCATCATTGGTTTTTCGCCTCGGATACCACTCGGCTCCATCCATGAGGCAACTGCACCTACATGTCATAAGCCAAGATTTTGACTCCAGTCATCTGAAGAACAAGAAGCATTGGAATTCTTTCAACACTGATTTCTTCCGAGACTCGGTCGACGTCATAGACGAAGTCAGTAGCCATGGAAAGGCAATCATCAAGGACGACGAGAGCTTGATGTCTATGGAGTTTCGTTGCAACAGATGCAGAAGTGCCCATCCCAACTTACCCAAGCTGAAAACACATATTTCCAAATGCCAATCGCCTTTCCCTTCCACGCTACTCGAGGGCGGTCGTTTAGTGAATGCTTCAGCTCTCAACCAGTTTAGTTTTTCGGAGAATTCTGATAGATCTTAA 2493 43.0 MRYAKCVTKQPDCSEFGGRADRGVLYKLHSSEEKRRRWRLIGFEGRREIQFRNGHGYRRKFDSQRSVVNDGDSFFCDFRNDECLYFKGNERRTKLIMVILVGAPGSGKSTFCELVMASSSRPWVRICQDTIGNGKSGTKAQCLKSAASALNDGKSVFVDRCNLEIEQRSEFVKLGSSLVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPNLNEGFKRITFCHSETEVQSAIDTYKSLGLHDALPDGCFGQKNADKKVQLGIMRFLKKAENPAKTCSNANTNKDFPSSQTTQEKKESSCTMLSNVNKESEKGEKPGVRSLENNISESDSPTLAFPSISTSDFKFSHEKAAEIIVEMVEEFMDKLGNARLVMVDLSHGSKILSLVKAKAAKKNICSTKFFTFVGDITKLKSDGGLHCNVIANAANWYACDIFMRLKPGGGGVNAAIFSAAGPSLEEATKQQAKSLRPGNVVAVQLPSTSPLFNREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLRDAYSSLFQAFISIVKDEFKSAKGIDERLGSAPSESRKHSEDTHHKFKRAELQIPERSKKWKGTQESAEALNQNNNKISHKMSKHWGSWAQALYNTAMYPERHANTVLETSDDVVVLNDIYPKARKHLLIVARYEGLDQLADVHKEHLPLLKTMHAVGMKWIDKFIHDDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSFNTDFFRDSVDVIDEVSSHGKAIIKDDESLMSMEFRCNRCRSAHPNLPKLKTHISKCQSPFPSTLLEGGRLVNASALNQFSFSENSDRS 830
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8972765 8976748 - Cp4.1LG08g12390.1 Cpe08g01237 474203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01237 830 Gene3D - 620 801 IPR036265 -
Cpe08g01237 830 MobiDBLite consensus disorder prediction 292 322 - -
Cpe08g01237 830 Gene3D Leucine Aminopeptidase, subunit E, domain 1 283 386 IPR043472 -
Cpe08g01237 830 Pfam Scavenger mRNA decapping enzyme C-term binding 629 738 - -
Cpe08g01237 830 ProSiteProfiles HIT domain profile. 625 733 IPR011146 GO:0003824
Cpe08g01237 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 240 IPR027417 -
Cpe08g01237 830 Gene3D - 85 253 IPR027417 -
Cpe08g01237 830 ProSitePatterns HIT domain signature. 707 725 IPR019808 -
Cpe08g01237 830 Pfam AAA domain 97 219 - -
Cpe08g01237 830 PANTHER APRATAXIN-RELATED 95 817 - -
Cpe08g01237 830 Gene3D Leucine Aminopeptidase, subunit E, domain 1 390 553 IPR043472 -
Cpe08g01237 830 SUPERFAMILY Macro domain-like 395 541 IPR043472 -
Cpe08g01237 830 PANTHER APRATAXIN 95 817 IPR026963 GO:0003677|GO:0006281|GO:0033699
Cpe08g01237 830 ProSiteProfiles Macro domain profile. 401 661 IPR002589 -
Cpe08g01237 830 MobiDBLite consensus disorder prediction 292 348 - -
Cpe08g01237 830 Pfam Macro domain 453 527 IPR002589 -
Cpe08g01237 830 SUPERFAMILY HIT-like 609 782 IPR036265 -
Cpe08g01237 830 MobiDBLite consensus disorder prediction 559 578 - -
Cpe08g01237 830 Pfam C2HE / C2H2 / C2HC zinc-binding finger 743 797 IPR032566 -
Cpe08g01237 830 SUPERFAMILY Macro domain-like 340 382 IPR043472 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01237 K10863 - csv:101216867 1204.12