Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g01237 | ATGAGATATGCTAAATGCGTAACCAAACAACCCGATTGCAGCGAATTTGGGGGGAGAGCTGACCGTGGAGTACTTTACAAGCTTCACTCATCGGAGGAAAAACGTCGGCGATGGCGATTGATAGGGTTTGAAGGAAGACGTGAAATCCAATTTAGAAATGGACATGGATATCGACGAAAATTCGACAGCCAAAGATCCGTCGTAAACGATGGAGATTCTTTCTTTTGCGATTTTCGTAACGATGAGTGTCTGTATTTTAAAGGAAATGAACGGCGAACGAAGCTCATAATGGTGATATTAGTGGGCGCACCTGGAAGCGGAAAGTCCACCTTCTGCGAACTCGTAATGGCCTCCTCTTCTCGCCCTTGGGTTCGAATCTGCCAGGATACCATTGGAAATGGCAAGTCCGGAACGAAAGCACAGTGTTTGAAGAGTGCAGCCAGTGCATTGAATGATGGAAAGAGTGTATTTGTGGACAGGTGCAATCTTGAAATAGAGCAGCGTTCTGAGTTTGTGAAACTAGGTAGCTCTCTAGTGGATGTACATGCTGTTGTATTGGATCTTCCTGCACAGCTCTGTATCTCCCGTTCGGTTAAGCGGACCGGTCATGAAGGGAACCTATCAGGTGGAAAAGCTGCTGCTGTTGTGAATAAAATGCTGCAAAAGAAAGAATTGCCGAACCTGAATGAAGGGTTCAAGCGTATAACGTTTTGTCACAGTGAAACGGAAGTTCAATCCGCTATAGATACGTATAAATCACTTGGTTTACATGATGCACTTCCAGATGGATGTTTTGGACAGAAGAATGCAGACAAGAAAGTGCAATTAGGCATAATGAGGTTCTTAAAGAAAGCAGAAAATCCTGCTAAAACATGTTCTAATGCCAATACCAATAAGGATTTTCCAAGTTCTCAAACTACCCAGGAAAAGAAAGAGTCTTCCTGCACGATGTTGAGCAATGTCAATAAAGAGTCGGAGAAAGGCGAAAAACCAGGCGTTAGATCCTTAGAAAACAATATTTCTGAAAGTGATTCCCCAACACTTGCATTTCCTTCTATTTCAACGTCGGATTTCAAGTTCAGCCATGAAAAGGCTGCTGAAATTATTGTTGAGATGGTGGAGGAATTCATGGATAAGCTTGGGAATGCCAGACTTGTTATGGTAGACTTGAGTCATGGATCAAAGATTTTGTCTCTAGTTAAAGCTAAAGCGGCCAAGAAAAATATTTGTTCCACCAAGTTTTTTACATTTGTAGGTGATATAACTAAACTCAAGTCAGATGGTGGATTGCACTGCAATGTAATAGCCAATGCTGCAAACTGGTATGCTTGTGACATATTTATGCGATTGAAACCAGGAGGGGGTGGTGTCAATGCAGCAATTTTTAGTGCTGCAGGTCCCAGTCTGGAAGAGGCAACAAAACAACAAGCCAAGTCCCTTCGACCTGGCAATGTTGTGGCCGTTCAATTGCCTTCAACTTCTCCTTTGTTTAATAGGGAAGGGGTAACCCATGTCATACATGTTCTTGGACCAAACATGAATCCTCAAAGACCAAATTATCTCAACAATGATTATGATGAAGGTTGCAAGCTTCTTCGTGATGCTTATTCTTCTCTATTTCAAGCCTTTATTTCAATAGTAAAAGATGAGTTTAAGTCGGCGAAGGGAATTGACGAACGCCTCGGCTCAGCACCTTCAGAATCACGAAAACACTCCGAGGACACCCATCACAAGTTTAAGAGAGCGGAGTTGCAAATTCCTGAAAGAAGCAAAAAGTGGAAAGGAACTCAGGAATCAGCTGAAGCATTAAACCAAAACAACAATAAGATTTCCCATAAGATGAGTAAGCACTGGGGCTCATGGGCACAAGCACTTTACAACACTGCAATGTATCCCGAGAGACATGCTAATACTGTACTGGAGACATCAGATGATGTTGTAGTACTGAATGATATTTATCCAAAAGCACGCAAACATCTTCTGATAGTGGCTCGATATGAAGGCCTCGATCAACTAGCTGATGTACATAAAGAACACCTTCCACTGTTGAAGACGATGCACGCCGTGGGTATGAAGTGGATTGATAAGTTCATTCATGACGATGCATCATTGGTTTTTCGCCTCGGATACCACTCGGCTCCATCCATGAGGCAACTGCACCTACATGTCATAAGCCAAGATTTTGACTCCAGTCATCTGAAGAACAAGAAGCATTGGAATTCTTTCAACACTGATTTCTTCCGAGACTCGGTCGACGTCATAGACGAAGTCAGTAGCCATGGAAAGGCAATCATCAAGGACGACGAGAGCTTGATGTCTATGGAGTTTCGTTGCAACAGATGCAGAAGTGCCCATCCCAACTTACCCAAGCTGAAAACACATATTTCCAAATGCCAATCGCCTTTCCCTTCCACGCTACTCGAGGGCGGTCGTTTAGTGAATGCTTCAGCTCTCAACCAGTTTAGTTTTTCGGAGAATTCTGATAGATCTTAA | 2493 | 43.0 | MRYAKCVTKQPDCSEFGGRADRGVLYKLHSSEEKRRRWRLIGFEGRREIQFRNGHGYRRKFDSQRSVVNDGDSFFCDFRNDECLYFKGNERRTKLIMVILVGAPGSGKSTFCELVMASSSRPWVRICQDTIGNGKSGTKAQCLKSAASALNDGKSVFVDRCNLEIEQRSEFVKLGSSLVDVHAVVLDLPAQLCISRSVKRTGHEGNLSGGKAAAVVNKMLQKKELPNLNEGFKRITFCHSETEVQSAIDTYKSLGLHDALPDGCFGQKNADKKVQLGIMRFLKKAENPAKTCSNANTNKDFPSSQTTQEKKESSCTMLSNVNKESEKGEKPGVRSLENNISESDSPTLAFPSISTSDFKFSHEKAAEIIVEMVEEFMDKLGNARLVMVDLSHGSKILSLVKAKAAKKNICSTKFFTFVGDITKLKSDGGLHCNVIANAANWYACDIFMRLKPGGGGVNAAIFSAAGPSLEEATKQQAKSLRPGNVVAVQLPSTSPLFNREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLRDAYSSLFQAFISIVKDEFKSAKGIDERLGSAPSESRKHSEDTHHKFKRAELQIPERSKKWKGTQESAEALNQNNNKISHKMSKHWGSWAQALYNTAMYPERHANTVLETSDDVVVLNDIYPKARKHLLIVARYEGLDQLADVHKEHLPLLKTMHAVGMKWIDKFIHDDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSFNTDFFRDSVDVIDEVSSHGKAIIKDDESLMSMEFRCNRCRSAHPNLPKLKTHISKCQSPFPSTLLEGGRLVNASALNQFSFSENSDRS | 830 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 8972765 | 8976748 | - | Cp4.1LG08g12390.1 | Cpe08g01237 | 474203 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g01237 | 830 | Gene3D | - | 620 | 801 | IPR036265 | - | |
Cpe08g01237 | 830 | MobiDBLite | consensus disorder prediction | 292 | 322 | - | - | |
Cpe08g01237 | 830 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 283 | 386 | IPR043472 | - | |
Cpe08g01237 | 830 | Pfam | Scavenger mRNA decapping enzyme C-term binding | 629 | 738 | - | - | |
Cpe08g01237 | 830 | ProSiteProfiles | HIT domain profile. | 625 | 733 | IPR011146 | GO:0003824 | |
Cpe08g01237 | 830 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 97 | 240 | IPR027417 | - | |
Cpe08g01237 | 830 | Gene3D | - | 85 | 253 | IPR027417 | - | |
Cpe08g01237 | 830 | ProSitePatterns | HIT domain signature. | 707 | 725 | IPR019808 | - | |
Cpe08g01237 | 830 | Pfam | AAA domain | 97 | 219 | - | - | |
Cpe08g01237 | 830 | PANTHER | APRATAXIN-RELATED | 95 | 817 | - | - | |
Cpe08g01237 | 830 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 390 | 553 | IPR043472 | - | |
Cpe08g01237 | 830 | SUPERFAMILY | Macro domain-like | 395 | 541 | IPR043472 | - | |
Cpe08g01237 | 830 | PANTHER | APRATAXIN | 95 | 817 | IPR026963 | GO:0003677|GO:0006281|GO:0033699 | |
Cpe08g01237 | 830 | ProSiteProfiles | Macro domain profile. | 401 | 661 | IPR002589 | - | |
Cpe08g01237 | 830 | MobiDBLite | consensus disorder prediction | 292 | 348 | - | - | |
Cpe08g01237 | 830 | Pfam | Macro domain | 453 | 527 | IPR002589 | - | |
Cpe08g01237 | 830 | SUPERFAMILY | HIT-like | 609 | 782 | IPR036265 | - | |
Cpe08g01237 | 830 | MobiDBLite | consensus disorder prediction | 559 | 578 | - | - | |
Cpe08g01237 | 830 | Pfam | C2HE / C2H2 / C2HC zinc-binding finger | 743 | 797 | IPR032566 | - | |
Cpe08g01237 | 830 | SUPERFAMILY | Macro domain-like | 340 | 382 | IPR043472 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g01237 | K10863 | - | csv:101216867 | 1204.12 |