Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01239 ATGCTATCATTCATGCAGATTCTTGCACCAAAAATAGCTGTTTGGTGCTCTAAATCATCCAATAAGAACAGAAAATGGAAGATCCAACAATGGAGAAATGGTTATTCGTACCTCAATGCTCTGTTTTTGGCTCATCTTTTGGCTTTTTCTCTTCAATCTGTCACCGGCCAGATGTGGGATGGAGTGGCTGTTACACAAGGAGATTTTCAAGCTCTTCAAGCTATAAAGCATGAACTTATTGATGTGAAAGGAGCCTTACATAGCTGGAATGGCAGTAATGGAGCTTGCTCCGGACAGTGGGCAGGAATCAAGTGTGTGAAGGGACAAGTCATTGCCATACAGCTTCCATGGAAGGAACTCGCCGGAAGGATTTCCGATAGGATTGGGCAGCTCCGGGAACTTCGGAAGCTCAGCCTTCATGATAATGCGATCTCCGGCACCATTCCTCGGTCGCTCGGGTACCTTCCGAATCTCAGAGGAATTTATCTTTTCAACAACAGATTTTCAGGGTCTATTCCTCCTACAATTGGTAATCTTCCCCTTCTTCAAACTCTTGATTTGAGCAACAATTTCCTCACTGGAGAAATTCCTTCTAGTCTTGCAAATTCAACCAAATTGATTAGAGTTAATCTGAGCTACAATTCGTTGTCGGGACCCATACCTCGAAGTTTTACGCAGTCGTTTTCTCTTGTAATTCTTGCCCTTCAGCACAATAATGTTTCTGGGATTGTCCCAGATTCTTGGGGTGGGTCTGGAAACAGAACTTGTCCACTTGGGGTTTTAACGCTTGATCATAATGTTATATCTGGAACAATTCCACCTTCTTTGACCAAATTGGAATGGCTTCAAGAGATTTCTTTCAGTGAAAATAACATCTCTGGGGCTATACCAGTCGAAATCGGCAGGCTGAAGAGGCTTCGCCGGTTGGATTTGTCGAAGAACGCCATCAATGGTGGCTTCCCTTCAAGTTTCACCAATCTGTCCTCTCTTGAGTCATTGAATGTTGAAAACAATCGCCTTGAAAGCCAGATTCCTAGAGATATTGATAGATTGCAGAATCTCTCAGTGATTAAGCTTGGGAAGAATCGTTTTAATGGGGAGATTCCTGCAAGTTTAGGGAACATTTCTGCTATTAAACATCTTGATTTCTCAGAAAATAACTTCATGGGACAGATTCCACCATCATTGACTAATTTGTTGAATCTAACATCTTTCAATGTCTCCTACAACAATCTCTCTGGTCCTGTCCCAATTCCCCTGTCTAATAAGTTCAATGCGAGCTCTTTTGTTGGGAACCTTAAACTCTGTGGCTTTAGTTCTTCAACTCCATGTCTACCTGCATCCTCCCCACAGAATATTACAAACCCATCAACCGATGTCCTGAAACCGCATCGCCGCCACAAACTAAGTGTAAAGGACATAATTCTGATAGCGGCCGGAGCGCTGTTGGTGCTTCTACTTGTTCTTTGCTCGATTTTGCTCTGTTGTTTGTTGTCAAAAAGAGCTGCTTCCAAAAAGAATGACAACGTAACAGCCAAACAAGCTGCCGTGAGGAGCATCGAGAAAGGTAGTACTGAAGTCGGGGCGAGTGAAGCTGGCGGAAAACTAGTTCATTTTGATGGGCCATTTGTTTTCACTGCCGATGATCTTCTGTGTGCAACTGCGGAGATTATGGGCAAGAGCACATATGGAACAGCATACAAAGCAACATTAGAAGATGGTAATGAAGTAGCAGTGAAAAGATTAAGGGAAAAGACAACAAAAGGGCAGAAGGAATTCGAAACCGAAGTTGCGGGACTCGGAAAAATTCGACACCCGAATCTACTTGCTCTTACAGCATACTACTTGGGCCCCAAAGGAGAGAAGCTTCTTGTCTTTGAATACATGCCTAGAGGAAGCCTCTCTTCCTTTCTTCATGCTCGCGGGCCGGAAACGACAGTCGATTGGGCAACGAGGATGAAGATAAAACCGACAGCAAAGACAGATGTTTACAGCCTAGGAGTCATAATATTGGAACTCTTGACAGGAAAATCACCTGGAGAAGCCATGGATGGAATGGATTTACCTCAGTGGGTGGCCTCAAAAGTGAAGGAGGAGTGGACAAATGAAGTGTTTGATTTGGAGCTGATGAAAGACACACCCAATATTGGCGATGAACTGCTAAACACTTTGAAACTAGCCCTGCATTGTGTCGATCCCTCGCCAGCAGCTCGGCCCGACGTACCGCAAATTCTCCAGCAACTGGAGGAAATTAAGGCGGCTTCTACTTCTGCCTTTGCAGCTCCTTTGGCTCTTCTTTCTGTGCTCCTTTCTTTGGCTGCTCCTTCTGTGGAGTTTTCATTTACCTACCATGGATTTAACGACTCGAAACTTGCTCTTGATGGAGCGATTGTTCTGAATCCATCTGGTGCGTTGAGGCTCACCAATCGATCACATAACGTTATAGGGCATGCATTCTATCCGACTCCATTCCAGATGTTTGATAAAAATTCTGACCCATCTGCAAATGTTTCATCCTTCAACACAACTGTTGTTTTTGCAATCAATCCATCGAGCCCCGGACAAGGTGGCTACGGTCTGGCCTTCGTCTTAGCTCCATCAACCAATTTTGAAGGTGCAGATAGTAAACACTTCCTTGGATTGTTCAACTCTACTAACCATGGTAACACTTCAAACCATATATTTGCTGTTGAATTTGACACTGTAAATGGGCATGAGGAAGGCAAGAACACCAAAGGCAATCATGTTGGGATCGATATCAATAGCGTTTCATCAGTTGCATCCAAACCTGCTTCTTATTCCGACTATGGCGATGCTAATGAAAAGGAACTGCAAATGGATTCTGGAGATCCTATCATTGCTTGGATTGAGTATGATGGCAAATTTGTGAACGTCACCGTAGCTCCCTTCACAAAACAGCAAAAGAAACCAACAGATCAACTCCTTTTCCATCGGATTGACCTGAAAGATGTTCTAAAGGAACAAATGTTTGTTGGCTTCTCGGCTTCGACAGGAGACCAAACAAGCTCTCATTACATTTTGGGATGGAGTTTTGCAGTGAATGGACCAGCGCCGTCGTTGAATTACTCTCTCCTTCCCAACCCTCCAAAAGAGCAAGATCTTGTTCCTCCGCCATCCAATTCCCACTTCAAGGTACTCATAGCAGTTTTTTCTGTGGTGGCCATTCTAGGAATCTTTTTCTTAGCTTTCTGGTTTAGAAGAATGTGGCAAACTGAGAGGCTTGAGGATTGGGAACGAGACTGTCCTCATAGATTCAACTACAGAGATCTTTACACAGCAACAAAAGGATTCAAAAGCAGCGAGCTAATTGGAATTGGGGGGTTTGGCTCAGTATACAAAGGTCAGTTACGTTCAACTGGAATTGAGATTGCTGTGAAGAGAGTTAGAGGAAACTCGCGCCAAGGAATGAAAGAATTCGCAGCAGAAATCGAAAGCTTAGGACGACTAAGACACAAAAACTTGGTGAATCTCCAAGGATGGTGCAAGAAAAAGAACGATCTACTCGTAGTTTACGATTATATACCAAATGGAAGCCTCTATTCACTTCTATATCATCCAAAAAACAACAACAGATTGAATTGGAAACAGAGATTCAACATTCTCAAAGGAATTGCAGCAGGATTATTGTACCTTCACGAAGAGTGGGAGCAGGTAGTGATCCACCGAGATGTGAAGCCAAGCAATGTTCTAATAGACGCCGACATGAATGCTCGATTGAGCGATTTCGGTCTCGCCAGGCAATACGACCACGCCGAAGAATCGCACACGACCGGCGTCGTCGGTACGATTGGCTACATAGCGCCGGAGTTGGTACGCACCGGGAGGGCTTCGAAAAACACCGATGTGTTTGGCTATGGAGTTTTGCTTCTGGAAGTGGCATGTGGAAGAAAGCCTCTGGAATCGGATCAGTTCATACTGGTGGAATGGGTGATGGAATGCTATGAAACGGGACAGATCCTGTATGCGGCTGATCCGAAGTTGAATTTGGTTTATGAGGTTGAAGAAATGGAGATGGTACTGCAGTTAGGGCTTCTTTGTACTCACCAGAGACCAGAAGCTCGGCCAACCATGAGACAGGTCACGAGGTTCCTTCACGGCGACGATCCAGTTCCGGCGGTCGACGATTGGGCTTGTTCCCAAACTTACTCCAAATGTAACTCGAGAATTACTGAAGAGATTTCGGCAAGGTCTTACCGTTCCTTGTCCATTGGCGCCATTTCTTCTAGCTCCATAGACGCGGGCAGGTAG 4269 44.65 MLSFMQILAPKIAVWCSKSSNKNRKWKIQQWRNGYSYLNALFLAHLLAFSLQSVTGQMWDGVAVTQGDFQALQAIKHELIDVKGALHSWNGSNGACSGQWAGIKCVKGQVIAIQLPWKELAGRISDRIGQLRELRKLSLHDNAISGTIPRSLGYLPNLRGIYLFNNRFSGSIPPTIGNLPLLQTLDLSNNFLTGEIPSSLANSTKLIRVNLSYNSLSGPIPRSFTQSFSLVILALQHNNVSGIVPDSWGGSGNRTCPLGVLTLDHNVISGTIPPSLTKLEWLQEISFSENNISGAIPVEIGRLKRLRRLDLSKNAINGGFPSSFTNLSSLESLNVENNRLESQIPRDIDRLQNLSVIKLGKNRFNGEIPASLGNISAIKHLDFSENNFMGQIPPSLTNLLNLTSFNVSYNNLSGPVPIPLSNKFNASSFVGNLKLCGFSSSTPCLPASSPQNITNPSTDVLKPHRRHKLSVKDIILIAAGALLVLLLVLCSILLCCLLSKRAASKKNDNVTAKQAAVRSIEKGSTEVGASEAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKRLREKTTKGQKEFETEVAGLGKIRHPNLLALTAYYLGPKGEKLLVFEYMPRGSLSSFLHARGPETTVDWATRMKIKPTAKTDVYSLGVIILELLTGKSPGEAMDGMDLPQWVASKVKEEWTNEVFDLELMKDTPNIGDELLNTLKLALHCVDPSPAARPDVPQILQQLEEIKAASTSAFAAPLALLSVLLSLAAPSVEFSFTYHGFNDSKLALDGAIVLNPSGALRLTNRSHNVIGHAFYPTPFQMFDKNSDPSANVSSFNTTVVFAINPSSPGQGGYGLAFVLAPSTNFEGADSKHFLGLFNSTNHGNTSNHIFAVEFDTVNGHEEGKNTKGNHVGIDINSVSSVASKPASYSDYGDANEKELQMDSGDPIIAWIEYDGKFVNVTVAPFTKQQKKPTDQLLFHRIDLKDVLKEQMFVGFSASTGDQTSSHYILGWSFAVNGPAPSLNYSLLPNPPKEQDLVPPPSNSHFKVLIAVFSVVAILGIFFLAFWFRRMWQTERLEDWERDCPHRFNYRDLYTATKGFKSSELIGIGGFGSVYKGQLRSTGIEIAVKRVRGNSRQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLVVYDYIPNGSLYSLLYHPKNNNRLNWKQRFNILKGIAAGLLYLHEEWEQVVIHRDVKPSNVLIDADMNARLSDFGLARQYDHAEESHTTGVVGTIGYIAPELVRTGRASKNTDVFGYGVLLLEVACGRKPLESDQFILVEWVMECYETGQILYAADPKLNLVYEVEEMEMVLQLGLLCTHQRPEARPTMRQVTRFLHGDDPVPAVDDWACSQTYSKCNSRITEEISARSYRSLSIGAISSSSIDAGR 1422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8981149 8994265 - Cp4.1LG08g12400.1 Cpe08g01239 474205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01239 1422 Gene3D Ribonuclease Inhibitor 226 341 IPR032675 -
Cpe08g01239 1422 Gene3D Phosphorylase Kinase; domain 1 1089 1180 - -
Cpe08g01239 1422 Gene3D Ribonuclease Inhibitor 66 225 IPR032675 -
Cpe08g01239 1422 SUPERFAMILY Protein kinase-like (PK-like) 1088 1381 IPR011009 -
Cpe08g01239 1422 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 658 756 - -
Cpe08g01239 1422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1226 1238 IPR008271 GO:0004672|GO:0006468
Cpe08g01239 1422 Pfam Leucine rich repeat 305 364 IPR001611 GO:0005515
Cpe08g01239 1422 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 658 756 - -
Cpe08g01239 1422 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1059 1376 - -
Cpe08g01239 1422 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 20 656 - -
Cpe08g01239 1422 Gene3D - 777 1027 - -
Cpe08g01239 1422 SUPERFAMILY L domain-like 92 436 - -
Cpe08g01239 1422 SUPERFAMILY Protein kinase-like (PK-like) 556 753 IPR011009 -
Cpe08g01239 1422 ProSiteProfiles Protein kinase domain profile. 552 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01239 1422 SMART serkin_6 1104 1371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01239 1422 CDD lectin_legume_LecRK_Arcelin_ConA 779 1022 IPR001220 GO:0030246
Cpe08g01239 1422 ProSitePatterns Protein kinases ATP-binding region signature. 1110 1133 IPR017441 GO:0005524
Cpe08g01239 1422 Gene3D Transferase(Phosphotransferase) domain 1 547 654 - -
Cpe08g01239 1422 Pfam Protein tyrosine and serine/threonine kinase 556 653 IPR001245 GO:0004672|GO:0006468
Cpe08g01239 1422 Gene3D Ribonuclease Inhibitor 342 448 IPR032675 -
Cpe08g01239 1422 SMART LRR_typ_2 327 351 IPR003591 -
Cpe08g01239 1422 SMART LRR_typ_2 179 203 IPR003591 -
Cpe08g01239 1422 SMART LRR_typ_2 131 155 IPR003591 -
Cpe08g01239 1422 SMART LRR_typ_2 303 326 IPR003591 -
Cpe08g01239 1422 Pfam Leucine rich repeat N-terminal domain 67 105 IPR013210 -
Cpe08g01239 1422 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 20 656 - -
Cpe08g01239 1422 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1059 1376 - -
Cpe08g01239 1422 Pfam Leucine Rich Repeat 182 201 IPR001611 GO:0005515
Cpe08g01239 1422 Gene3D Transferase(Phosphotransferase) domain 1 1181 1390 - -
Cpe08g01239 1422 CDD STKc_IRAK 1110 1371 - -
Cpe08g01239 1422 Pfam Protein kinase domain 1105 1368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01239 1422 SUPERFAMILY Concanavalin A-like lectins/glucanases 778 1037 IPR013320 -
Cpe08g01239 1422 ProSiteProfiles Protein kinase domain profile. 1104 1371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01239 1422 Pfam Legume lectin domain 780 1030 IPR001220 GO:0030246
Cpe08g01239 1422 Gene3D Transferase(Phosphotransferase) domain 1 655 761 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00100 Cpe-Chr1:585262 Cpe08g01239 Cpe-Chr8:8981149 6.20E-14 dispersed
Cpe01g01012 Cpe-Chr1:5980111 Cpe08g01239 Cpe-Chr8:8981149 2.67E-13 dispersed
Cpe02g00990 Cpe-Chr2:8968586 Cpe08g01239 Cpe-Chr8:8981149 6.94E-134 dispersed
Cpe03g00038 Cpe-Chr3:198241 Cpe08g01239 Cpe-Chr8:8981149 6.03E-45 dispersed
Cpe03g00101 Cpe-Chr3:521855 Cpe08g01239 Cpe-Chr8:8981149 1.32E-06 dispersed
Cpe08g01239 Cpe-Chr8:8981149 Cpe10g00899 Cpe-Chr10:5048944 1.97E-08 dispersed
Cpe15g00386 Cpe-Chr15:5085194 Cpe08g01239 Cpe-Chr8:8981149 2.39E-06 dispersed
Cpe15g00808 Cpe-Chr15:8086557 Cpe08g01239 Cpe-Chr8:8981149 1.91E-11 dispersed
Cpe19g00338 Cpe-Chr19:2992737 Cpe08g01239 Cpe-Chr8:8981149 5.00E-07 dispersed
Cpe08g01239 Cpe-Chr8:8981149 Cpe03g00034 Cpe-Chr3:178075 4.01E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62570 PF00069 Pkinase 2.20E-51 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01239 - - cmax:111470194 1197.19