Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01255 ATGAGTTATAACGAGAAGAATCGAGGTAGAGATGGTAGGGAAACCGAGCAGCAGCCAGTTAAGAGGAACTCTGTTGACGCAGAACGGAAATCGGTCAGCCGAAATGGATCCATTACGGCTCAACAGTTGACGATTGATGAGAATCTTCTTGTCGACCCGAAATTACTATTCATTGGATCCAAGATTGGCGAGGGTGCTCATGGGAAGGTTTATGAAGGCAGGTATCGGAACAAAATCGTTGCCATTAAAGTTCTTCATCGAGGGAGTACTCCAGAAGAAAGAGCTGCACTTGAGAATCGTTTTGCTCGTGAAGTTAATATGATGTCCCGGGTAAAACATGACAATCTTGTCAAGTTTATTGGAGCTTGTAAAGAACCACTAATGGTGATAGTTACAGAGCTATTACCAGGAATGTCACTGAGGAAGTATCTGATGAATAATCGTAAGCAACGGCTGGATCCTCGGTTGGCTATTAACTTTGCTTTGGATGTTGCTCGTGCTATGGATTGTCTCCATGCCAATGGGATTATACATAGAGATCTGAAACCCGACAATTTGTTGCTTACGGAAAACCAAAGGTCTGTGAAGCTTGCAGACTTTGGCCTTGCTAGAGAAGAATCTGTGACTGAGATGATGACTGCAGAAACAGGGACTTACCGCTGGATGGCTCCTGAGTTGTATAGCACTGTGACCTTGCGCCAGGGAGAGAAGAAGCATTACAACAACAAGGTCGATGTATACAGCTTTGGAATTGTCTTATGGGAACTATTGACAAACCGAATGCCATTCGAAGGAATGTCCAATTTGCAAGCTGCATATGCTGCTGCTTTCAAGCAAGAGAGGCCTAGTATTCCAGGCGACATACCTCCTGATCTAGCATTTATAGTACAGTCGTGTTGGGTTGAAGATCCCAACATGAGGCCCAGCTTCAGCCAGATCATCCGGATGCTTAATGAATATCTATTTACACTCCCACCTCCTTTGCTATCTTCACAAGCATCTTATACAACCGAGACAGCAACGACTAGCGACGGTGCTGTATCCGAGTTCTCCGCTCGAGCAAGAGGAAAGTTTGGATTCCTTCGCCAACTGTTTGCTGCTACTAAAAAGGCTAAGGGCTCGCAATAA 1128 44.95 MSYNEKNRGRDGRETEQQPVKRNSVDAERKSVSRNGSITAQQLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYRNKIVAIKVLHRGSTPEERAALENRFAREVNMMSRVKHDNLVKFIGACKEPLMVIVTELLPGMSLRKYLMNNRKQRLDPRLAINFALDVARAMDCLHANGIIHRDLKPDNLLLTENQRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSIPGDIPPDLAFIVQSCWVEDPNMRPSFSQIIRMLNEYLFTLPPPLLSSQASYTTETATTSDGAVSEFSARARGKFGFLRQLFAATKKAKGSQ 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9088537 9092441 + Cp4.1LG08g12490.1 Cpe08g01255 474221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01255 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Cpe08g01255 375 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672|GO:0006468
Cpe08g01255 375 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Cpe08g01255 375 PRINTS Tyrosine kinase catalytic domain signature 244 266 IPR001245 GO:0004672|GO:0006468
Cpe08g01255 375 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672|GO:0006468
Cpe08g01255 375 SUPERFAMILY Protein kinase-like (PK-like) 55 338 IPR011009 -
Cpe08g01255 375 SMART serkin_6 56 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01255 375 Gene3D Transferase(Phosphotransferase) domain 1 139 344 - -
Cpe08g01255 375 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 17 351 - -
Cpe08g01255 375 ProSiteProfiles Protein kinase domain profile. 56 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01255 375 PANTHER SERINE-THREONINE PROTEIN KINASE 17 351 - -
Cpe08g01255 375 MobiDBLite consensus disorder prediction 1 33 - -
Cpe08g01255 375 CDD STKc_MAP3K-like 62 317 - -
Cpe08g01255 375 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Cpe08g01255 375 Pfam Protein tyrosine and serine/threonine kinase 58 317 IPR001245 GO:0004672|GO:0006468
Cpe08g01255 375 Gene3D Phosphorylase Kinase; domain 1 44 135 - -
Cpe08g01255 375 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00016 Cpe08g01255 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02327 Cpe-Chr1:19575002 Cpe08g01255 Cpe-Chr8:9088537 2.82E-115 dispersed
Cpe03g00588 Cpe-Chr3:3541980 Cpe08g01255 Cpe-Chr8:9088537 1.74E-65 dispersed
Cpe08g01255 Cpe-Chr8:9088537 Cpe10g00595 Cpe-Chr10:3488252 1.47E-98 dispersed
Cpe03g00016 Cpe-Chr3:73557 Cpe08g01255 Cpe-Chr8:9088537 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62571 PF07714 PK_Tyr_Ser-Thr 1.70E-61 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01255 - - cmax:111481423 650.588