Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01270 ATGGGTACTATCGAGACAATACCGCGCAATGGCGGAAGGCAAAAAGTTGAAGGCAGCCGGAGGGGACGTCGGCGTTTAACAACATTAGACCAATCTCTGAGAAGAATGAAAGTGTTGTGGAGCAGCAATTCCATCTCTCCCACGACGTCTGCCATTGCTACTGTCACTGTCATTGCAACATCAGCACACCACCCGAGCCTACCGCCGTCACCACTGCTGCTTCACAGTCCCAGTCAAACTAGTCCAGTCGGAATGGGGAACTGCGTTCAACAGTTGCATACGTTATCTTCTTCATTGGCTGTGAAAAACGGCAGCAACAATGCTACAGATAAAAAGCATATTCATAACCGGTCCATATCAGATCTAAGCGATCCTTCGACCCCTCGCAGCCTCGAGGATTTGAGAAAGAATTCGGTGCTTTACACACACATTATTGCCTTCACATTGTTCGAGCTGGAAACTATCACCAAGAGTTTCCGTTCCGATTACATTCTGGGAGAGGGCGGATTTGGAACTGTTTATAAAGGCTACATTGACGAGAACGTCAGGGTTGGCCTCAAATCTCTTCCTGTTGCTGTCAAGGTTCTCAATAAGGAAGGCCTCCAGGGACACCGAGAATGGCTTACAGAAGTCAACTTTCTTGGTCAGCTAAGACACCCAAACCTTGTAAAGTTGATTGGTTACTGCTGCGAGGATGACCACAGATTACTTGTCTACGAGTTCATGTTTAGAGGAAGCCTTGAAAACCACCTCTTTCGAACCAAGCTTTCTGATTTTGGGCTTGCGAAAGCTGGACCTCAAGGTGATGAGACACATGTTTCAACTCGAGTAATGGGTACTTATGGTTATGCTGCCCCCGAATATGTCATGACTGCACAGAAGGCCTGCAGCCTGGCATACTATTGCCTGAGCCAGAACCCCAAAGCAAGACCCTTAATGAGCGATGTGGTCGAAACTTTAGAACCATTACAGAGCAGCAACGGTGCAACTGAATCGGGAAGTAGCCCATTTGTTAGGGGGGGCATCCCTGATTACAGGATGCGGCCAAGGTTCGCCGACAATGTTGGTCGTGGTGGTGCCAATTGCCGGTCTCCTAACCCCACCTGTTCCCCCAGCGTCCCTGCGGCTTGTAGGTTTAATTTGTGGGGCAGCCTAAACCTAATCCCGCTGAATGATAATTACATCCACCGGCCTGCATTCAAGTTCATTTCGAGGCCGGAAATCGTGGCGATGTCGGCTGTGCTAACGCTGCTACTTGTGGCTTTCTTCTACGCCGGAATTGATACCACCATTTCCCTTACTCATTTCGGCGATTCTGCGGCACTGGTGTCCCTGAAAAACGAATGGCAAAACACACCACCAAGCTGGGGAACATCAAATGATCCGTGTGGAGCTCCCTGGGAAGGAGTGCTTTGCAACAATTCAAGAGTCACTGCACTGAGATTATCAGCTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTGTCTGAACTAAAATCATTGGACCTTTCGTTCAATACAGATCTCACTGGTTCGATCTCTCCGGCAATAGGGAAACTACAGAATTTGAATATCTTGATCCTAGCTGGGTGTGGCTTCAGTGGCAATATTCCTGAAGAACTGGGCAATCTTTCTAAGCTATCCTTCTTGGCGTTAAATTCTAACAAGTTCACCGGTACCATACCGCCATCTCTGGGAAAACTCTCCGAACTCTATTGGCTGGACCTAGCAAGTAATCAATTAACAGGCAGTATTCCTGTCTCAACTTCTGAATCTCCTGGTTTGGACCTCCTTCTGAAAGCTAAACATTTTCATTTCAACAAAAACCAGTTATCGGGTTCCATTTCGCCTAAACTTTTTAGATCTGAAATGGTGTTAATACACATATTATTTGATGGAAATAGTCTTTCTGGGAGTATCCCTCCAACTTTGGGACTTGTTAAGACCCTTGAGGTTCTTCGACTCGATCGGAATTCACTAACAGGACCAGTCCCATCAAATCTGAACAACCTAACAAATGTTGATGAATTGAATTTAGCCAACAATAAGTTGACTGGTCCAATGCCAAACTTAACTGATATGATCTCACTAAATTATGTGGACCTTAGTAACAACTCATTTGATTCATCAGCAGCTCCGGAATGGTTCTCAAATCTACAATCGCTCACCACTCTGGTTGTTGAACATGGTTCAATACAGGGATCTGTGCCACAAGCAGTCTTTAGCTTACCACAAATACAGCAAATAAAACTGAAGAACAATTCATTCAATGGGACATTAAGTATGGGTGACACAGTTAGCCCACAGTTGCAGCTTGTTGATTTGCAAAGTAACGGTATTTCCGAATTTACCTTTGGTTCAGAATATACCAAAACTTTGATGCTGATAGGGAATCCTGTGTGTACCACTGATAACACCCTCTCAAATACGAAATATTGCCAGCTTCGAGATCATACGACACAACCCTATTCCACCAGCCTTTTGTACTGTGGAAGTAAGTTGTGTCCTCCTGATGAGAAGTTAAACCCTCAGAGTTGTGAATGTGCCTTTCCATTTCAAGGGACTTTATACTTTAGAGCACCCTCGTTCAGGGAATTGTCGAACGTGACGTTGTTTCACTTATTGGAATTGAGTCTTTGGACCAAGCTGGAGCTTACGACTGGTTCGGTTTTTATTCAAAACCCTTTCTTTAATGTTGATGATTATCTTCAGATGGAGCTTGCTCTTTTTCCACCCAACGGAAAGTATTTTAATAGGTCGGATATTCAGAGGATTGGGTTTGCCTTGAGTAATCAAACCTACAAACCTCCCAAAGCATTTGGGCCATTTTATTTCATTGCATCCCCCTATGGTTTTCCAGACAATGCATGGCGAACTGAAGTCAGCTCTGTAGTGATAATTGGAGTAGCTATTGGTTGTGCCATTCTCGTTCTAGGACTCATTGGAGTTGGAATATACGCGATTCGCCAAAAGAAACGTGCAGAAAAGGCCATCGTATTGAGTCGGCCATTCGCTTCTTGGGCACCAAGTGGAGACGATAGTGGAGGTGCTCCACAGTTGAAGGGAGCTAGATGGTTTTCTTATGATGAACTTAAAAAATGCACAAATAGTTTCTCCATGAGCAATGAGATAGGATCTGGAGGATATGGCAAGGTATATAGAGGAGTGCTCGTGGATGGACAAGTAGTTGCGATCAAACGAGCTCAACAAGGATCAAGGCAGGGTGGCATTGAGTTCAAGACAGAAATCGAACTGCTTTCACGAGTTCATCACAAAAACCTTCTTGGCCTCATCGGATTTTGTTTCGAACAAGAAGAGCAGATGCTTGTTTATGAATTCATGCCTAATGGAACATTAAGAGATAGCCTATCTGATCCTGAATATTACATGACTCAACAATTGTCTGAGAAAAGTGATGTATATAGCTTCGGAGTCGTTATGTTGGAATTGTTAACCGCTAAGCTGCCTATTCAAAAAGGAAAGTACGTAGTTCGTGAGGTGCGTACGTTGATGAACAAAAATGAAGAAGAGTATTACGGTCTGAAGCAGATCCTGGATGCCGCCATACTAAACAATACCACGGCTATTACCGGGCTTGGAAAGTTCTTGGAGTTGGCTATGCAATGCGTTGAAGAGTCAGCTGCAGAGCGCCCCACAATGAGTGAAGTGGCTAAGGCAATTGAGAGTATTTTGCAGAGTGATGGAATAGGTACAAACGCAACAACTCCATCCACATCTGCTACCGAGTTTGGGGCTTCCAAAACTGCTCCTACGCATCCCTATAATGATCCTATAACAAAGGACACTGATGACAGTAAGGCTTTTGATTACAGTGGAGGACACACTCTTCCAACAAAT 3867 44.74 MGTIETIPRNGGRQKVEGSRRGRRRLTTLDQSLRRMKVLWSSNSISPTTSAIATVTVIATSAHHPSLPPSPLLLHSPSQTSPVGMGNCVQQLHTLSSSLAVKNGSNNATDKKHIHNRSISDLSDPSTPRSLEDLRKNSVLYTHIIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRTKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSNGATESGSSPFVRGGIPDYRMRPRFADNVGRGGANCRSPNPTCSPSVPAACRFNLWGSLNLIPLNDNYIHRPAFKFISRPEIVAMSAVLTLLLVAFFYAGIDTTISLTHFGDSAALVSLKNEWQNTPPSWGTSNDPCGAPWEGVLCNNSRVTALRLSAMGLKGKLGGDIGGLSELKSLDLSFNTDLTGSISPAIGKLQNLNILILAGCGFSGNIPEELGNLSKLSFLALNSNKFTGTIPPSLGKLSELYWLDLASNQLTGSIPVSTSESPGLDLLLKAKHFHFNKNQLSGSISPKLFRSEMVLIHILFDGNSLSGSIPPTLGLVKTLEVLRLDRNSLTGPVPSNLNNLTNVDELNLANNKLTGPMPNLTDMISLNYVDLSNNSFDSSAAPEWFSNLQSLTTLVVEHGSIQGSVPQAVFSLPQIQQIKLKNNSFNGTLSMGDTVSPQLQLVDLQSNGISEFTFGSEYTKTLMLIGNPVCTTDNTLSNTKYCQLRDHTTQPYSTSLLYCGSKLCPPDEKLNPQSCECAFPFQGTLYFRAPSFRELSNVTLFHLLELSLWTKLELTTGSVFIQNPFFNVDDYLQMELALFPPNGKYFNRSDIQRIGFALSNQTYKPPKAFGPFYFIASPYGFPDNAWRTEVSSVVIIGVAIGCAILVLGLIGVGIYAIRQKKRAEKAIVLSRPFASWAPSGDDSGGAPQLKGARWFSYDELKKCTNSFSMSNEIGSGGYGKVYRGVLVDGQVVAIKRAQQGSRQGGIEFKTEIELLSRVHHKNLLGLIGFCFEQEEQMLVYEFMPNGTLRDSLSDPEYYMTQQLSEKSDVYSFGVVMLELLTAKLPIQKGKYVVREVRTLMNKNEEEYYGLKQILDAAILNNTTAITGLGKFLELAMQCVEESAAERPTMSEVAKAIESILQSDGIGTNATTPSTSATEFGASKTAPTHPYNDPITKDTDDSKAFDYSGGHTLPTN 1289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9167132 9182638 + Cp4.1LG08g12630.1 Cpe08g01270 474236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01270 1289 Pfam Leucine rich repeat 699 758 IPR001611 GO:0005515
Cpe08g01270 1289 ProSitePatterns Protein kinases ATP-binding region signature. 1047 1069 IPR017441 GO:0005524
Cpe08g01270 1289 Gene3D Transferase(Phosphotransferase) domain 1 1116 1248 - -
Cpe08g01270 1289 SUPERFAMILY Protein kinase-like (PK-like) 1026 1236 IPR011009 -
Cpe08g01270 1289 Gene3D Ribonuclease Inhibitor 437 593 IPR032675 -
Cpe08g01270 1289 MobiDBLite consensus disorder prediction 1 22 - -
Cpe08g01270 1289 PANTHER LRR RECEPTOR-LIKE KINASE 254 293 - -
Cpe08g01270 1289 ProSiteProfiles Protein kinase domain profile. 1041 1289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01270 1289 MobiDBLite consensus disorder prediction 1238 1265 - -
Cpe08g01270 1289 Gene3D Ribonuclease Inhibitor 594 694 IPR032675 -
Cpe08g01270 1289 SUPERFAMILY Protein kinase-like (PK-like) 137 323 IPR011009 -
Cpe08g01270 1289 ProSitePatterns Protein kinases ATP-binding region signature. 165 194 IPR017441 GO:0005524
Cpe08g01270 1289 PANTHER LRR RECEPTOR-LIKE KINASE 1128 1266 - -
Cpe08g01270 1289 Gene3D Ribonuclease Inhibitor 695 829 IPR032675 -
Cpe08g01270 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1128 1266 - -
Cpe08g01270 1289 Pfam Leucine rich repeat N-terminal domain 438 473 IPR013210 -
Cpe08g01270 1289 ProSiteProfiles Protein kinase domain profile. 159 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01270 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 147 252 - -
Cpe08g01270 1289 Gene3D Phosphorylase Kinase; domain 1 125 238 - -
Cpe08g01270 1289 SUPERFAMILY L domain-like 444 831 - -
Cpe08g01270 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 411 1127 - -
Cpe08g01270 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 254 293 - -
Cpe08g01270 1289 Gene3D Phosphorylase Kinase; domain 1 1015 1115 - -
Cpe08g01270 1289 MobiDBLite consensus disorder prediction 1238 1289 - -
Cpe08g01270 1289 Gene3D Transferase(Phosphotransferase) domain 1 239 297 - -
Cpe08g01270 1289 Pfam Protein tyrosine and serine/threonine kinase 164 253 IPR001245 GO:0004672|GO:0006468
Cpe08g01270 1289 Pfam Protein tyrosine and serine/threonine kinase 1043 1128 IPR001245 GO:0004672|GO:0006468
Cpe08g01270 1289 Pfam Protein tyrosine and serine/threonine kinase 1129 1228 IPR001245 GO:0004672|GO:0006468
Cpe08g01270 1289 PANTHER LRR RECEPTOR-LIKE KINASE 411 1127 - -
Cpe08g01270 1289 PANTHER LRR RECEPTOR-LIKE KINASE 147 252 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00004 Cpe08g01270 CCT
Cpe03g00004 Cpe08g01270 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00927 Cpe-Chr3:6325143 Cpe08g01270 Cpe-Chr8:9167132 1.05E-14 dispersed
Cpe08g01270 Cpe-Chr8:9167132 Cpe16g00119 Cpe-Chr16:2583288 5.42E-14 dispersed
Cpe13g00939 Cpe-Chr13:7922516 Cpe08g01270 Cpe-Chr8:9167132 5.37E-48 dispersed
Cpe03g00002 Cpe-Chr3:7739 Cpe08g01270 Cpe-Chr8:9167132 1.03E-40 transposed
Cpe03g00004 Cpe-Chr3:20132 Cpe08g01270 Cpe-Chr8:9167132 2.17E-15 transposed
Cpe11g00657 Cpe-Chr11:4362672 Cpe08g01270 Cpe-Chr8:9167132 8.32E-13 transposed
Cpe10g01013 Cpe-Chr10:5826319 Cpe08g01270 Cpe-Chr8:9167132 1.44E-06 wgd
Cpe03g00001 Cpe-Chr3:21 Cpe08g01270 Cpe-Chr8:9167132 1.12E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62574 PF07714 PK_Tyr_Ser-Thr 1.60E-06 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01270 - - csv:101220026 1198.73