Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01274 ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGAGTTCTTCCTTTAACTCCAGCAGTGGCAACGATGATGCTCTTCTTCAAAGCTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGCGATGGCTCCAACTTTGCACCCCCTACTCCTACAACCATATCGATGGCAATTCCAGCCGAACTTGCTGGGGTCATACCTTTGATTGATAGATTCCAGGTCGAAGGATTCTTAAGGATGATGCATAAACAGATACATTCTTCTGGAAAACGTGGATTCTTTTCCAAACGATCTGTAGGTCCTCAAGTTCGGGACAAATTCACATTTGAAGATATGTTGTGTTTCCAAAAGGATCCAATACCAACTTCATTACTTAAAATTAACTCTGACTTGGTGAGCCGAGCCATTAAACTATTCCAAATAATCTTGAAGTACATGGGTGTCGACTCGTCTGATAGAGTTAATGCAATAAGCTTAGATGAACGAATTGAGCTTGTTGGAAAACTATACAAGCAAACTTTGAAACGTTCAGAGCTTCGAGATGAACTTTTTATTCAAATCTCAAAGCAAACTAGAAATTCTCCCGATTGGCAATATTTGATCAAAGCATGGGAGCTGATGTATCTATGTGCATCTGCCATGCCTCCTAGCAAGGATATTGAGTATGTTCATAATGTTGCACAAGGCAGTAGTACTGATTCGGAGGTTCGAGTTTTTGCATTAAATACACTGAATGCTTTAAAGCGTTGCATGAAGGCGGGTCCTAGGCATATAATACCTGGTCGTGAGGAAATTGAAGCTCTTTTAACAGGGCGAAAGCTTACAACCATAGTGTTTTTCTTGGATGAAACCTTTGAAGAAATCACATACGATATGACAACAACAGTGGCTGATTCTGTTGAGGAACTTTCAGGAATTATAAAACTGTCAGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGATTGTCAGTGGGGCTAAAGCACTTGATTTAGGAAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTGTTAGCAGAATTCAAGGCAGCAAAAGATCGAAGTAAAGGAGAAATTCTGCACTTCAAGCTGACATTTAAAAAGAAGCTGTTTCGGGAGTCTGATGAAGCTGTTGCAGACCCAATGTTTATACAGCTATCATATGTTCAGCTTCAGCATGACTATTTGATGGGGAATTATCCTGTTGGAAGGGATGATGCTGCTCAGCTGTCAGCATTACAGATCCTGGTTGAAATTGGGTTTATTAACAGTCCAGAATCTTGCACTGATTGGAATTCGCTTCTGGAAAGATTCGTTCCCCGACAAATTGCCATAACGAGACCAAAGCGAGAGTGGGAGTTGGATATTCTCTCGCGTTATCGTTCCATGGAGCATCTGACAAAAGATGATGCAAGACAACAATTTCTTCGGATATTGAGATCGCTTCCCTACGGGAATTCTGTTTTCTTTGGCATCCGCAAGATTGATGATCCCATTGGACTTCTACCTGGGCGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCGAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGCAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTTGCTGGTGTCCTACACATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAGACACACATAAACGATGTCATGTTGCGTCGTTACTCTAAAGCTAGATCTGCTGCTGTTGGCTCCATGCTTGGAGATTCTTCCAGCAATTTTAAGGCTCAAAGTGTGGAAGCATATGAGAAACGAGTTCATGAGTTGAGTAAAGGCATTGAAGAGTCTCAGAGAAATGCTGAACAGGACATGTTAATGGAAAAAAGGAGTATGGAAGCAAGAATAGCCAAGTTGAGCGCCACCGTACTGGAAAATAATGTGGAAAAAGATACGGTCGGAATTAATGAACAGGTTCTACAAAAACTTCAAGATGAGTTGAGCCTTCGAAATGATGAGTTGCAAGCCACTGAAGAAATCAGAAAGAAACTGGTAAATGAAAAACTATTACTGGAACAAAGAATATTTGGACTTGAAATGACAACTAGCGACGAGATGGAACATCTTAAGAAAAGCTTTGAACATGAACGCAAAGTCTTGAAGCTGAGAGTGGCAGAACTTGAGAAGAAACTTGAAGAAGACATTGACCGAAAAAATGAGCAAACAGCTAATATTTTGAAGATGCAAGGAGCTCAGCTAGCTGAGATGGAAGCGCTTTATAAGGAAGAGCAAATTTTAAGGAAACGCTATTTCAACATGATAGAAGATATGAAAGGAAAAATTCGAGTTTACTGTCGACTTAGACCTCTTAATGAGAAAGAAATCATTGAAAAAGAAAAGAACGTGCTTAGAAGTCTGGACGAGTTCACAGTTGAACATTCGTGGAAAGATGATAAGCCGAAGCAACATATGTATGATCGTGTATTCGATGGCACTGTCTCCCAGGAAGATGCATACATGGTAGAATTATATCAAGACACGTTAGTAGATCTTCTTTTGCTGAAGAATGCAAAACGATCGAGATTAGATATCAAAAAGGATACAAAGGGAATGGTATCCATTGAAAATGTCACAATAGCTTCTATCTCAACGTTTGAAGAATTGAAAAACATTATTTATAGAGGGTCCGAGCAACGACATACTTCCGAGACTCAAATGAACGAAGAAAGTTCAAGATCACATTTGATACTTTCAATTATTATCGAAAGCACCAACCTTCAGACGCAATCCGTTTCTAAAGGAAAGCTTAGTTTTGTTGATCTTGCGGGGTCAGAGAGAGTGAAGAAGTCAGGCTCTTCTGGTAGCCAACTTAAGGAAGCTCAAAGCATAAATAAATCACTTTCAGCACTTGGGGATGTTATCAGTGCTTTGTCTTCTGGGGGTCAGCACATACCTTACAGAAATCATAAGCTAACAATGTTGATGAGCGATTCACTCGGTGGTAACGCTAAAACGCTTATGTTTGTCAACGTCTCTCCAGCTGAATCCAACTTAGACGAGACGTACAATTCTCTCATGTACGCGTCTAGAGTTCGATCGATTGTTAACGATCCAAGCCGAAACGTAGCATCGAAAGAGGTTGCTCGACTGAAAAAACTGGTTGGTTATTGGAAAGAACAAGCAGGTAGAAGGGGAGAGGTCGACGAGTTGGAAGAAATTCAAGACGAGCGACATTGTAAAGAGAAAGCGGATATCAGATATTCCATGTAA 3306 40.38 MTFDMAQSARTMSSSFNSSSGNDDALLQSFAAASNGDDYDSDGSNFAPPTPTTISMAIPAELAGVIPLIDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVRDKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYMGVDSSDRVNAISLDERIELVGKLYKQTLKRSELRDELFIQISKQTRNSPDWQYLIKAWELMYLCASAMPPSKDIEYVHNVAQGSSTDSEVRVFALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGIIKLSAHSSFSLFECRKIVSGAKALDLGNEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFIQLSYVQLQHDYLMGNYPVGRDDAAQLSALQILVEIGFINSPESCTDWNSLLERFVPRQIAITRPKREWELDILSRYRSMEHLTKDDARQQFLRILRSLPYGNSVFFGIRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSMLGDSSSNFKAQSVEAYEKRVHELSKGIEESQRNAEQDMLMEKRSMEARIAKLSATVLENNVEKDTVGINEQVLQKLQDELSLRNDELQATEEIRKKLVNEKLLLEQRIFGLEMTTSDEMEHLKKSFEHERKVLKLRVAELEKKLEEDIDRKNEQTANILKMQGAQLAEMEALYKEEQILRKRYFNMIEDMKGKIRVYCRLRPLNEKEIIEKEKNVLRSLDEFTVEHSWKDDKPKQHMYDRVFDGTVSQEDAYMVELYQDTLVDLLLLKNAKRSRLDIKKDTKGMVSIENVTIASISTFEELKNIIYRGSEQRHTSETQMNEESSRSHLILSIIIESTNLQTQSVSKGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSRNVASKEVARLKKLVGYWKEQAGRRGEVDELEEIQDERHCKEKADIRYSM 1101
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9210303 9220254 + Cp4.1LG08g12790.1 Cpe08g01274 474240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01274 1101 Coils Coil 612 632 - -
Cpe08g01274 1101 SUPERFAMILY Second domain of FERM 372 489 IPR035963 -
Cpe08g01274 1101 Pfam Microtubule binding 773 849 IPR031852 GO:0008017
Cpe08g01274 1101 ProSiteProfiles MyTH4 domain profile. 115 269 IPR000857 GO:0005856
Cpe08g01274 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 792 1074 IPR027417 -
Cpe08g01274 1101 PANTHER KINESIN-LIKE PROTEIN 67 849 - -
Cpe08g01274 1101 PANTHER KINESIN-LIKE PROTEIN 850 1076 - -
Cpe08g01274 1101 Coils Coil 722 756 - -
Cpe08g01274 1101 Pfam Kinesin motor domain 852 1046 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g01274 1101 PRINTS Kinesin heavy chain signature 916 933 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g01274 1101 PRINTS Kinesin heavy chain signature 996 1017 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g01274 1101 PRINTS Kinesin heavy chain signature 947 965 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g01274 1101 SMART kinesin_4 790 1054 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g01274 1101 Coils Coil 672 706 - -
Cpe08g01274 1101 Pfam FERM central domain 380 494 IPR019748 -
Cpe08g01274 1101 Gene3D - 273 377 - -
Cpe08g01274 1101 SUPERFAMILY PH domain-like 494 582 - -
Cpe08g01274 1101 Gene3D - 386 487 IPR014352 -
Cpe08g01274 1101 ProSiteProfiles Kinesin motor domain profile. 852 1046 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g01274 1101 SUPERFAMILY Prismane protein-like 732 821 IPR011254 GO:0003824|GO:0016491
Cpe08g01274 1101 Gene3D Kinesin motor domain 851 1053 IPR036961 -
Cpe08g01274 1101 ProSiteProfiles FERM domain profile. 274 588 IPR000299 GO:0005856
Cpe08g01274 1101 PANTHER KINESIN-LIKE PROTEIN KLP-3 67 849 - -
Cpe08g01274 1101 PANTHER KINESIN-LIKE PROTEIN KLP-3 850 1076 - -
Cpe08g01274 1101 Gene3D MyTH4 domain 95 271 IPR038185 -
Cpe08g01274 1101 Gene3D - 1054 1097 - -
Cpe08g01274 1101 SMART B41_5 270 494 IPR019749 -
Cpe08g01274 1101 CDD FERM_B-lobe 389 487 IPR019748 -
Cpe08g01274 1101 ProSitePatterns Kinesin motor domain signature. 946 957 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cpe08g01274 1101 ProSiteProfiles Kinesin motor domain profile. 792 851 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g01274 1101 Pfam MyTH4 domain 168 267 IPR000857 GO:0005856
Cpe08g01274 1101 SMART MyTH4_1 115 269 IPR000857 GO:0005856
Cpe08g01274 1101 Gene3D - 492 599 IPR011993 -
Cpe08g01274 1101 CDD FERM_C_KCBP 491 597 - -
Cpe08g01274 1101 Gene3D Kinesin motor domain 735 850 IPR036961 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01274 Cpe-Chr8:9210303 Cpe18g00034 Cpe-Chr18:595868 1.87E-42 dispersed
Cpe08g01274 Cpe-Chr8:9210303 Cpe20g00392 Cpe-Chr20:2203140 6.14E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01274 - - csin:114264458 1407.89