Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g01274 | ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATGAGTTCTTCCTTTAACTCCAGCAGTGGCAACGATGATGCTCTTCTTCAAAGCTTTGCTGCTGCTTCAAATGGGGATGATTATGATAGCGATGGCTCCAACTTTGCACCCCCTACTCCTACAACCATATCGATGGCAATTCCAGCCGAACTTGCTGGGGTCATACCTTTGATTGATAGATTCCAGGTCGAAGGATTCTTAAGGATGATGCATAAACAGATACATTCTTCTGGAAAACGTGGATTCTTTTCCAAACGATCTGTAGGTCCTCAAGTTCGGGACAAATTCACATTTGAAGATATGTTGTGTTTCCAAAAGGATCCAATACCAACTTCATTACTTAAAATTAACTCTGACTTGGTGAGCCGAGCCATTAAACTATTCCAAATAATCTTGAAGTACATGGGTGTCGACTCGTCTGATAGAGTTAATGCAATAAGCTTAGATGAACGAATTGAGCTTGTTGGAAAACTATACAAGCAAACTTTGAAACGTTCAGAGCTTCGAGATGAACTTTTTATTCAAATCTCAAAGCAAACTAGAAATTCTCCCGATTGGCAATATTTGATCAAAGCATGGGAGCTGATGTATCTATGTGCATCTGCCATGCCTCCTAGCAAGGATATTGAGTATGTTCATAATGTTGCACAAGGCAGTAGTACTGATTCGGAGGTTCGAGTTTTTGCATTAAATACACTGAATGCTTTAAAGCGTTGCATGAAGGCGGGTCCTAGGCATATAATACCTGGTCGTGAGGAAATTGAAGCTCTTTTAACAGGGCGAAAGCTTACAACCATAGTGTTTTTCTTGGATGAAACCTTTGAAGAAATCACATACGATATGACAACAACAGTGGCTGATTCTGTTGAGGAACTTTCAGGAATTATAAAACTGTCAGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGATTGTCAGTGGGGCTAAAGCACTTGATTTAGGAAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTGTTAGCAGAATTCAAGGCAGCAAAAGATCGAAGTAAAGGAGAAATTCTGCACTTCAAGCTGACATTTAAAAAGAAGCTGTTTCGGGAGTCTGATGAAGCTGTTGCAGACCCAATGTTTATACAGCTATCATATGTTCAGCTTCAGCATGACTATTTGATGGGGAATTATCCTGTTGGAAGGGATGATGCTGCTCAGCTGTCAGCATTACAGATCCTGGTTGAAATTGGGTTTATTAACAGTCCAGAATCTTGCACTGATTGGAATTCGCTTCTGGAAAGATTCGTTCCCCGACAAATTGCCATAACGAGACCAAAGCGAGAGTGGGAGTTGGATATTCTCTCGCGTTATCGTTCCATGGAGCATCTGACAAAAGATGATGCAAGACAACAATTTCTTCGGATATTGAGATCGCTTCCCTACGGGAATTCTGTTTTCTTTGGCATCCGCAAGATTGATGATCCCATTGGACTTCTACCTGGGCGAATAATTTTGGGTATCAACAAAAGAGGGGTTCATTTCTTCCGTCCAGTTCCGAAGGAGTATTTACATTCTGCTGAATTAAGAGATATAATGCAGTTCGGCAGCAGTAACACTGCTGTCTTTTTTAAGATGAGAGTTGCTGGTGTCCTACACATTTTCCAGTTTGAGACCAAGCAGGGAGAAGAAATTTGCATTGCTCTGCAGACACACATAAACGATGTCATGTTGCGTCGTTACTCTAAAGCTAGATCTGCTGCTGTTGGCTCCATGCTTGGAGATTCTTCCAGCAATTTTAAGGCTCAAAGTGTGGAAGCATATGAGAAACGAGTTCATGAGTTGAGTAAAGGCATTGAAGAGTCTCAGAGAAATGCTGAACAGGACATGTTAATGGAAAAAAGGAGTATGGAAGCAAGAATAGCCAAGTTGAGCGCCACCGTACTGGAAAATAATGTGGAAAAAGATACGGTCGGAATTAATGAACAGGTTCTACAAAAACTTCAAGATGAGTTGAGCCTTCGAAATGATGAGTTGCAAGCCACTGAAGAAATCAGAAAGAAACTGGTAAATGAAAAACTATTACTGGAACAAAGAATATTTGGACTTGAAATGACAACTAGCGACGAGATGGAACATCTTAAGAAAAGCTTTGAACATGAACGCAAAGTCTTGAAGCTGAGAGTGGCAGAACTTGAGAAGAAACTTGAAGAAGACATTGACCGAAAAAATGAGCAAACAGCTAATATTTTGAAGATGCAAGGAGCTCAGCTAGCTGAGATGGAAGCGCTTTATAAGGAAGAGCAAATTTTAAGGAAACGCTATTTCAACATGATAGAAGATATGAAAGGAAAAATTCGAGTTTACTGTCGACTTAGACCTCTTAATGAGAAAGAAATCATTGAAAAAGAAAAGAACGTGCTTAGAAGTCTGGACGAGTTCACAGTTGAACATTCGTGGAAAGATGATAAGCCGAAGCAACATATGTATGATCGTGTATTCGATGGCACTGTCTCCCAGGAAGATGCATACATGGTAGAATTATATCAAGACACGTTAGTAGATCTTCTTTTGCTGAAGAATGCAAAACGATCGAGATTAGATATCAAAAAGGATACAAAGGGAATGGTATCCATTGAAAATGTCACAATAGCTTCTATCTCAACGTTTGAAGAATTGAAAAACATTATTTATAGAGGGTCCGAGCAACGACATACTTCCGAGACTCAAATGAACGAAGAAAGTTCAAGATCACATTTGATACTTTCAATTATTATCGAAAGCACCAACCTTCAGACGCAATCCGTTTCTAAAGGAAAGCTTAGTTTTGTTGATCTTGCGGGGTCAGAGAGAGTGAAGAAGTCAGGCTCTTCTGGTAGCCAACTTAAGGAAGCTCAAAGCATAAATAAATCACTTTCAGCACTTGGGGATGTTATCAGTGCTTTGTCTTCTGGGGGTCAGCACATACCTTACAGAAATCATAAGCTAACAATGTTGATGAGCGATTCACTCGGTGGTAACGCTAAAACGCTTATGTTTGTCAACGTCTCTCCAGCTGAATCCAACTTAGACGAGACGTACAATTCTCTCATGTACGCGTCTAGAGTTCGATCGATTGTTAACGATCCAAGCCGAAACGTAGCATCGAAAGAGGTTGCTCGACTGAAAAAACTGGTTGGTTATTGGAAAGAACAAGCAGGTAGAAGGGGAGAGGTCGACGAGTTGGAAGAAATTCAAGACGAGCGACATTGTAAAGAGAAAGCGGATATCAGATATTCCATGTAA | 3306 | 40.38 | MTFDMAQSARTMSSSFNSSSGNDDALLQSFAAASNGDDYDSDGSNFAPPTPTTISMAIPAELAGVIPLIDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVRDKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYMGVDSSDRVNAISLDERIELVGKLYKQTLKRSELRDELFIQISKQTRNSPDWQYLIKAWELMYLCASAMPPSKDIEYVHNVAQGSSTDSEVRVFALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGIIKLSAHSSFSLFECRKIVSGAKALDLGNEEYVGLDDNKYIGDLLAEFKAAKDRSKGEILHFKLTFKKKLFRESDEAVADPMFIQLSYVQLQHDYLMGNYPVGRDDAAQLSALQILVEIGFINSPESCTDWNSLLERFVPRQIAITRPKREWELDILSRYRSMEHLTKDDARQQFLRILRSLPYGNSVFFGIRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICIALQTHINDVMLRRYSKARSAAVGSMLGDSSSNFKAQSVEAYEKRVHELSKGIEESQRNAEQDMLMEKRSMEARIAKLSATVLENNVEKDTVGINEQVLQKLQDELSLRNDELQATEEIRKKLVNEKLLLEQRIFGLEMTTSDEMEHLKKSFEHERKVLKLRVAELEKKLEEDIDRKNEQTANILKMQGAQLAEMEALYKEEQILRKRYFNMIEDMKGKIRVYCRLRPLNEKEIIEKEKNVLRSLDEFTVEHSWKDDKPKQHMYDRVFDGTVSQEDAYMVELYQDTLVDLLLLKNAKRSRLDIKKDTKGMVSIENVTIASISTFEELKNIIYRGSEQRHTSETQMNEESSRSHLILSIIIESTNLQTQSVSKGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSRNVASKEVARLKKLVGYWKEQAGRRGEVDELEEIQDERHCKEKADIRYSM | 1101 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9210303 | 9220254 | + | Cp4.1LG08g12790.1 | Cpe08g01274 | 474240 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g01274 | 1101 | Coils | Coil | 612 | 632 | - | - | |
Cpe08g01274 | 1101 | SUPERFAMILY | Second domain of FERM | 372 | 489 | IPR035963 | - | |
Cpe08g01274 | 1101 | Pfam | Microtubule binding | 773 | 849 | IPR031852 | GO:0008017 | |
Cpe08g01274 | 1101 | ProSiteProfiles | MyTH4 domain profile. | 115 | 269 | IPR000857 | GO:0005856 | |
Cpe08g01274 | 1101 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 792 | 1074 | IPR027417 | - | |
Cpe08g01274 | 1101 | PANTHER | KINESIN-LIKE PROTEIN | 67 | 849 | - | - | |
Cpe08g01274 | 1101 | PANTHER | KINESIN-LIKE PROTEIN | 850 | 1076 | - | - | |
Cpe08g01274 | 1101 | Coils | Coil | 722 | 756 | - | - | |
Cpe08g01274 | 1101 | Pfam | Kinesin motor domain | 852 | 1046 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cpe08g01274 | 1101 | PRINTS | Kinesin heavy chain signature | 916 | 933 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cpe08g01274 | 1101 | PRINTS | Kinesin heavy chain signature | 996 | 1017 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cpe08g01274 | 1101 | PRINTS | Kinesin heavy chain signature | 947 | 965 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cpe08g01274 | 1101 | SMART | kinesin_4 | 790 | 1054 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cpe08g01274 | 1101 | Coils | Coil | 672 | 706 | - | - | |
Cpe08g01274 | 1101 | Pfam | FERM central domain | 380 | 494 | IPR019748 | - | |
Cpe08g01274 | 1101 | Gene3D | - | 273 | 377 | - | - | |
Cpe08g01274 | 1101 | SUPERFAMILY | PH domain-like | 494 | 582 | - | - | |
Cpe08g01274 | 1101 | Gene3D | - | 386 | 487 | IPR014352 | - | |
Cpe08g01274 | 1101 | ProSiteProfiles | Kinesin motor domain profile. | 852 | 1046 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cpe08g01274 | 1101 | SUPERFAMILY | Prismane protein-like | 732 | 821 | IPR011254 | GO:0003824|GO:0016491 | |
Cpe08g01274 | 1101 | Gene3D | Kinesin motor domain | 851 | 1053 | IPR036961 | - | |
Cpe08g01274 | 1101 | ProSiteProfiles | FERM domain profile. | 274 | 588 | IPR000299 | GO:0005856 | |
Cpe08g01274 | 1101 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 67 | 849 | - | - | |
Cpe08g01274 | 1101 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 850 | 1076 | - | - | |
Cpe08g01274 | 1101 | Gene3D | MyTH4 domain | 95 | 271 | IPR038185 | - | |
Cpe08g01274 | 1101 | Gene3D | - | 1054 | 1097 | - | - | |
Cpe08g01274 | 1101 | SMART | B41_5 | 270 | 494 | IPR019749 | - | |
Cpe08g01274 | 1101 | CDD | FERM_B-lobe | 389 | 487 | IPR019748 | - | |
Cpe08g01274 | 1101 | ProSitePatterns | Kinesin motor domain signature. | 946 | 957 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Cpe08g01274 | 1101 | ProSiteProfiles | Kinesin motor domain profile. | 792 | 851 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cpe08g01274 | 1101 | Pfam | MyTH4 domain | 168 | 267 | IPR000857 | GO:0005856 | |
Cpe08g01274 | 1101 | SMART | MyTH4_1 | 115 | 269 | IPR000857 | GO:0005856 | |
Cpe08g01274 | 1101 | Gene3D | - | 492 | 599 | IPR011993 | - | |
Cpe08g01274 | 1101 | CDD | FERM_C_KCBP | 491 | 597 | - | - | |
Cpe08g01274 | 1101 | Gene3D | Kinesin motor domain | 735 | 850 | IPR036961 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g01274 | Cpe-Chr8:9210303 | Cpe18g00034 | Cpe-Chr18:595868 | 1.87E-42 | dispersed | |
Cpe08g01274 | Cpe-Chr8:9210303 | Cpe20g00392 | Cpe-Chr20:2203140 | 6.14E-50 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g01274 | - | - | csin:114264458 | 1407.89 |