Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01301 ATGCCGATCGAAGAAGATGTTGAGAGTTGCGGTAGCAGAGCTACGAACTCCTCTTCTCCCCATGCGACCTCCAGGCATCATCGCCAGAAGCTCGAGGTTTATACCGAAGTGCTCCGACGGATTCAGGAATCCAATTTTCATGAGGCGAATCTACCTGGGTTTGATGATGAGCTTTGGCTCCACTTCAATCGCCTCCCTGCTCGATACGCATTGGATGTGAATGTCGACAGGGCGGAAGATGTACTCACACATAAGAGATTACTTCAATTGGCTGTAGACCCTGCTAAACGACCTGTATTTGAAGTTCGTCCTGTGCAGGTTTATCCTTCTGCCAATGAAAACCTTTTCAATTCTTCTTGTTTGGATCCTTCAATGATGGAAGATGCTCAGAGCTCTTTTAATTGTTCTATCAAACATGGGAACCATCCACCTCCAACCTTTGGTTCTTCACCTAGTCTTGAAGCACGTGCACTTCAGGCCATTAAGTATGGGGTTGAAGATAGGGACAGTGCCCTAAACGCAATGCCTTGCTTTTCTCGGCCAATGCATGAGATCACGTTTGCAACAACTGACAAGCCTAAACTCCTTAGTCAGTTAACTTCCCTACTGGCTGATGTTGGACTTAACATACAAGAAGCTCATGCTTTCTCCTCTGTTGATGGTTTCTCTCTGGATGTTTTTGTCATTGATGGTTGGCCTTATGAGGAAACTGAGGAGCTTAAAAGGGCATTAGAAAAAGAAGTTTCAAATTTCAAGGAGCAGTGTTGGTCAGAAAAGCAGTCCAGTCCTGCTTTGGGTAAGCATGACCAGAATAGAGTTGAATCTTTTCCTAGTTGTGTTGAAATACCTACTGATGGTACTGATGTCTGGGAAATTGACGCCAGACAACTAAAATTTGAGAATAAAGTTGGATCCGGGTCATATGGGGACCTGTATCGAGGCACGTATTGTAGTCAAGAAGTAGCTATTAAAGTACTGAAGCCTGAGCGTATTAATGAAGAGATGCTCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTAATTGGTGCTTGTACTAAACCTCCAAAACTTTGCATCGTGACCGAGTTTATGTCGAGAGGAAGTATATATGACTTCCTTCATAAGCAAAGAGGAGCATTTAACCTTATATCTCTACTTAAAGTAGCCATTGATATTTCACGAGGGATGAATTATTTGCACCAAAATAATATAATCCACCGAGACCTCAAGACTGCCAATCTTCTGATGGATGAAAACATGGTCGTTAAGGTTGCTGATTTTGGAGTCGCCAGAGTTCAAGCTCAATCTGGAGTGATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAATTCCTTACTCATCTATGACCCCATTACAAGCAGCTGTTGGTGTGGTCCAGAAGAGACTGCGCCCAGTAATACCCAAGAACACCCATCCCGTTCTTGCCGAACTTCTTGAGAGATGCTGGCGACAGGATCCAACCGAACGTCCAAACTTCACTGAAATTTTAGAGATCCTCAAGCAGATTGCTGACCAGGTCGAAAACAACGGGGAACATCGACGCAAGAAAGACAAGTTATCTGGTGCGTTTTTCTCAGCCTTCAAAAAGGGGTACCACTGA 1659 43.76 MPIEEDVESCGSRATNSSSPHATSRHHRQKLEVYTEVLRRIQESNFHEANLPGFDDELWLHFNRLPARYALDVNVDRAEDVLTHKRLLQLAVDPAKRPVFEVRPVQVYPSANENLFNSSCLDPSMMEDAQSSFNCSIKHGNHPPPTFGSSPSLEARALQAIKYGVEDRDSALNAMPCFSRPMHEITFATTDKPKLLSQLTSLLADVGLNIQEAHAFSSVDGFSLDVFVIDGWPYEETEELKRALEKEVSNFKEQCWSEKQSSPALGKHDQNRVESFPSCVEIPTDGTDVWEIDARQLKFENKVGSGSYGDLYRGTYCSQEVAIKVLKPERINEEMLKEFSQEVYIMRKVRHKNVVQLIGACTKPPKLCIVTEFMSRGSIYDFLHKQRGAFNLISLLKVAIDISRGMNYLHQNNIIHRDLKTANLLMDENMVVKVADFGVARVQAQSGVMTAETGTYRWMAPEIPYSSMTPLQAAVGVVQKRLRPVIPKNTHPVLAELLERCWRQDPTERPNFTEILEILKQIADQVENNGEHRRKKDKLSGAFFSAFKKGYH 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9370950 9377962 - Cp4.1LG08g13190.1 Cpe08g01301 474267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01301 552 Gene3D Transferase(Phosphotransferase) domain 1 375 465 - -
Cpe08g01301 552 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 462 537 - -
Cpe08g01301 552 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 463 - -
Cpe08g01301 552 Pfam Protein tyrosine and serine/threonine kinase 297 463 IPR001245 GO:0004672|GO:0006468
Cpe08g01301 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Cpe08g01301 552 Gene3D Transferase(Phosphotransferase) domain 1 466 542 - -
Cpe08g01301 552 ProSitePatterns Protein kinases ATP-binding region signature. 303 324 IPR017441 GO:0005524
Cpe08g01301 552 SMART serkin_6 297 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01301 552 ProSiteProfiles ACT domain profile. 184 259 IPR002912 -
Cpe08g01301 552 CDD ACT_TyrKc 182 248 - -
Cpe08g01301 552 Coils Coil 234 254 - -
Cpe08g01301 552 SUPERFAMILY ACT-like 182 255 IPR045865 -
Cpe08g01301 552 Gene3D Phosphorylase Kinase; domain 1 287 374 - -
Cpe08g01301 552 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 462 537 - -
Cpe08g01301 552 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 17 463 - -
Cpe08g01301 552 CDD STKc_MAP3K-like 303 519 - -
Cpe08g01301 552 ProSiteProfiles Protein kinase domain profile. 297 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01301 552 SUPERFAMILY Protein kinase-like (PK-like) 275 519 IPR011009 -
Cpe08g01301 552 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00611 Cpe-Chr4:6366608 Cpe08g01301 Cpe-Chr8:9370950 0 dispersed
Cpe08g01301 Cpe-Chr8:9370950 Cpe15g00613 Cpe-Chr15:6819267 0 dispersed
Cpe14g01045 Cpe-Chr14:8766023 Cpe08g01301 Cpe-Chr8:9370950 0 wgd
Cpe02g00053 Cpe-Chr2:277513 Cpe08g01301 Cpe-Chr8:9370950 2.76E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62576 PF07714 PK_Tyr_Ser-Thr 1.60E-47 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01301 - - csv:101220844 974.541