Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01306 ATGATCGAATCCATACAATGGAAGCCGCTTGCTGATCGTCGAATCCCACCACGTGTCGTCTTGTTCTTCTCCATCGATCGACACGTCGCCTCCTGCGCCATAGCGATACTCATTTCTCCTCCTGAAAATTTGCCCCAAGATATTTACCCCACTCCATTACTGGTCTTCACGAAATCGAAGAAAATGACTCCACCCCACTTCCTGATTCGTAAAAGGACAAAACCCCATCAAAATTTCAGTGCTTTTTGTGGAGATGGGTCGGAAGAAAAGTCAAAGATGGGTCTAAAATTTGAGAGCTCTTCTCAGGGAAGGATTTTGAGTTTGATGAACTTCCTGAGGGCCTGCTGGCAGCCATGTGCTGATCGGCAGGCACGTCGGGGCTGTGGTTCCGATTCAGCTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCACCATGTCAATGGAGAGTTTTCAATGGCTGTTGTTCAGGCCAACAATTTACTTGAGGATCAGAGCCAGCTTGAGTCTGGCCCCTTGAGCTTGCTCGAGTCGGGACCCTATGGAACCTTTCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGGAGTGATTTGTGACGGGAAACTCTACATTGCGAACCTAGGTGATTCCCGTGCCGTGTTGGGAAGGCTTGTGCGGTCCACTGGAGAAGTTCTTCCGATTCAGCTATCATCAGAGCACAATGCAAGTATACCGTCAGTCCGCCAGGAGATGCAGTCTTCGCACCCCGATGACCCCCGTATTGTGGTGTTGAAGCATAATGTATGGCGCGTAAAGGGCTTGATTCAGGTCCCCAGGCAGTCCTTTCGAGCTGCCGGTGTCAAAGATGTTCGAGATGTCGTCAAAGCTCGTCTCTGCAGCACCCATCTGATGCACATCAAAACCAAGACATGA 939 50.48 MIESIQWKPLADRRIPPRVVLFFSIDRHVASCAIAILISPPENLPQDIYPTPLLVFTKSKKMTPPHFLIRKRTKPHQNFSAFCGDGSEEKSKMGLKFESSSQGRILSLMNFLRACWQPCADRQARRGCGSDSAGCQDGLLWYKDHGHHVNGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFQWPMNPQIAAVGSCCLVGVICDGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNASIPSVRQEMQSSHPDDPRIVVLKHNVWRVKGLIQVPRQSFRAAGVKDVRDVVKARLCSTHLMHIKTKT 312
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 9397628 9403796 - Cp4.1LG08g13230.1 Cpe08g01306 474272
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01306 312 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 108 186 - -
Cpe08g01306 312 ProSiteProfiles PPM-type phosphatase domain profile. 115 312 IPR001932 -
Cpe08g01306 312 Gene3D - 85 307 IPR036457 -
Cpe08g01306 312 SUPERFAMILY PP2C-like 155 281 IPR036457 -
Cpe08g01306 312 PANTHER ALPHABET, ISOFORM E-RELATED 185 281 - -
Cpe08g01306 312 PANTHER ALPHABET, ISOFORM E-RELATED 108 186 - -
Cpe08g01306 312 Pfam Protein phosphatase 2C 193 246 IPR001932 -
Cpe08g01306 312 PANTHER PROTEIN PHOSPHATASE 2C 60-RELATED 185 281 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01306 Cpe-Chr8:9397628 Cpe05g01363 Cpe-Chr5:9586872 3.91E-76 dispersed
Cpe10g00688 Cpe-Chr10:3957063 Cpe08g01306 Cpe-Chr8:9397628 4.43E-73 wgd
Cpe14g01040 Cpe-Chr14:8734462 Cpe08g01306 Cpe-Chr8:9397628 1.09E-79 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01306 - K01102 osa:4349275 177.563