Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe08g01306 | ATGATCGAATCCATACAATGGAAGCCGCTTGCTGATCGTCGAATCCCACCACGTGTCGTCTTGTTCTTCTCCATCGATCGACACGTCGCCTCCTGCGCCATAGCGATACTCATTTCTCCTCCTGAAAATTTGCCCCAAGATATTTACCCCACTCCATTACTGGTCTTCACGAAATCGAAGAAAATGACTCCACCCCACTTCCTGATTCGTAAAAGGACAAAACCCCATCAAAATTTCAGTGCTTTTTGTGGAGATGGGTCGGAAGAAAAGTCAAAGATGGGTCTAAAATTTGAGAGCTCTTCTCAGGGAAGGATTTTGAGTTTGATGAACTTCCTGAGGGCCTGCTGGCAGCCATGTGCTGATCGGCAGGCACGTCGGGGCTGTGGTTCCGATTCAGCTGGCTGCCAAGATGGGCTACTTTGGTACAAGGACCATGGCCACCATGTCAATGGAGAGTTTTCAATGGCTGTTGTTCAGGCCAACAATTTACTTGAGGATCAGAGCCAGCTTGAGTCTGGCCCCTTGAGCTTGCTCGAGTCGGGACCCTATGGAACCTTTCAATGGCCTATGAACCCCCAGATTGCGGCTGTTGGTTCTTGCTGTCTGGTTGGAGTGATTTGTGACGGGAAACTCTACATTGCGAACCTAGGTGATTCCCGTGCCGTGTTGGGAAGGCTTGTGCGGTCCACTGGAGAAGTTCTTCCGATTCAGCTATCATCAGAGCACAATGCAAGTATACCGTCAGTCCGCCAGGAGATGCAGTCTTCGCACCCCGATGACCCCCGTATTGTGGTGTTGAAGCATAATGTATGGCGCGTAAAGGGCTTGATTCAGGTCCCCAGGCAGTCCTTTCGAGCTGCCGGTGTCAAAGATGTTCGAGATGTCGTCAAAGCTCGTCTCTGCAGCACCCATCTGATGCACATCAAAACCAAGACATGA | 939 | 50.48 | MIESIQWKPLADRRIPPRVVLFFSIDRHVASCAIAILISPPENLPQDIYPTPLLVFTKSKKMTPPHFLIRKRTKPHQNFSAFCGDGSEEKSKMGLKFESSSQGRILSLMNFLRACWQPCADRQARRGCGSDSAGCQDGLLWYKDHGHHVNGEFSMAVVQANNLLEDQSQLESGPLSLLESGPYGTFQWPMNPQIAAVGSCCLVGVICDGKLYIANLGDSRAVLGRLVRSTGEVLPIQLSSEHNASIPSVRQEMQSSHPDDPRIVVLKHNVWRVKGLIQVPRQSFRAAGVKDVRDVVKARLCSTHLMHIKTKT | 312 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 9397628 | 9403796 | - | Cp4.1LG08g13230.1 | Cpe08g01306 | 474272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe08g01306 | 312 | PANTHER | PROTEIN PHOSPHATASE 2C 60-RELATED | 108 | 186 | - | - | |
| Cpe08g01306 | 312 | ProSiteProfiles | PPM-type phosphatase domain profile. | 115 | 312 | IPR001932 | - | |
| Cpe08g01306 | 312 | Gene3D | - | 85 | 307 | IPR036457 | - | |
| Cpe08g01306 | 312 | SUPERFAMILY | PP2C-like | 155 | 281 | IPR036457 | - | |
| Cpe08g01306 | 312 | PANTHER | ALPHABET, ISOFORM E-RELATED | 185 | 281 | - | - | |
| Cpe08g01306 | 312 | PANTHER | ALPHABET, ISOFORM E-RELATED | 108 | 186 | - | - | |
| Cpe08g01306 | 312 | Pfam | Protein phosphatase 2C | 193 | 246 | IPR001932 | - | |
| Cpe08g01306 | 312 | PANTHER | PROTEIN PHOSPHATASE 2C 60-RELATED | 185 | 281 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe08g01306 | Cpe-Chr8:9397628 | Cpe05g01363 | Cpe-Chr5:9586872 | 3.91E-76 | dispersed | |
| Cpe10g00688 | Cpe-Chr10:3957063 | Cpe08g01306 | Cpe-Chr8:9397628 | 4.43E-73 | wgd | |
| Cpe14g01040 | Cpe-Chr14:8734462 | Cpe08g01306 | Cpe-Chr8:9397628 | 1.09E-79 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe08g01306 | - | K01102 | osa:4349275 | 177.563 |