Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01337 ATGGACATCTCTGCAACAGCCTTCCTTTTCCTTACCTTTCTATCCCTCTGCCTTTACCTTCTTCTCTTCGCTTCACCAAAGAAATCCAAATCCAACCAAGGTTTCAAACACTTTCCCTTAGTGGGAACCTTGCCGCTCTTCTTGTTAAACCGACACCGTTTTCTTGACTGGTCGACGGAGGTTCTCAGCAACTGCCAGACCAACACGGCGGTCTTCCGTCGTCCGGGGAAGGTTCACGGCGTAATCACCGCAAACCCACTTGTGGTGGAGCACATACTGAAGACCCAGTTCGAGAATTACCCAAAAGGAAAACGCTTCATTTCGCTTTTGGAGGATTTTCTGGGACGCGGAATTTTCAACTCCGACGGAGAAATTTGGAAAGTTCAGAGGAAGACGGCGAGTTATGAGTTCAACACCAAATCGCTTAGGAATTTCGTTATGGAAAATGTCACGGTTGAGATTCAGACGAGGCTGTTGCCTATTTTGGGAAAGGCTTCTGAAACGGAACGGATTTTGGATCTGCAGGACGTTTTGGAGCGATTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTTCGACCCCTGTTGTCTCGGCGGCGATGGCACTTCCGGCGCCGATTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCTGGCAGATTTATGTATGCTTTGCCGGGTTTGTACAAAGTGAAGAAATTTTTTAATATGGGATCAGAGAGAACCCTGAAGAAATCCATAGCCAGAGTTCACGAATTTGCAGAGGACATCATACGCTCAAGAATGGAAGAGAAGAAGACAACCCATGTCAAAAACGACCAAGATTTACTCTCCCGGTTTATGGGAAGCCAAGAAAATAACTCCCCTGAATTCCTCCGAGACATAATCATAAGCTTCATCCTCGCCGGCCGAGACACCACCTCCTCTGCTCTAACATGGTTCTTCTGGATCCTATCCTCCCGACCAAACATCACACAAAAAATCCTCAAAGAGCTGGAAACAATCCGCTCAAGAACCGGCAAGAAACTCGGAGCAGAGTACAGCTTGGAGGAGCTCCGAGATATGCACTATCTGCAAGCAGCACTATCGGAGACTCTGCGGCTGTACCCGCCGGTGCCGGTGGACACGAAAGCGTGCCGGAACGAGGACGTATTACCGGACGGGACGTTGGTCGGGAGGGAGTGGTTCGTGACGTACCACACATATGCAATGGGGAGAATGGAGAGGATTTGGGGGGAGAATTGCGGGGAGTTCTTGCCGGAGAGGTGGGTGGAGAATGGGGTGTGTAGGGCGGAGAGCCCGTTTCGGTTCCCGGTGTTTCACGCGGGTCCGAGGATGTGCTTGGGGAAGGAGATGGCTTATATTCAGATGAAGTCCATAGCTGCGGCGGTGATAGAGAGGTTTGAGGTGGGGATGGCGGAGAAGGAGAAGAGTCCAAAGTATTTGTTGTCGCTGACGCTGAGGATGGAGAATGGGTGTCCTGTGGTGCTCAAAAAGAGAGACCCCAGTTTGGCCATTTGA 1527 50.16 MDISATAFLFLTFLSLCLYLLLFASPKKSKSNQGFKHFPLVGTLPLFLLNRHRFLDWSTEVLSNCQTNTAVFRRPGKVHGVITANPLVVEHILKTQFENYPKGKRFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVTVEIQTRLLPILGKASETERILDLQDVLERFAFDNVCKLAFNFDPCCLGGDGTSGADFMRAFEDAATLSSGRFMYALPGLYKVKKFFNMGSERTLKKSIARVHEFAEDIIRSRMEEKKTTHVKNDQDLLSRFMGSQENNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRPNITQKILKELETIRSRTGKKLGAEYSLEELRDMHYLQAALSETLRLYPPVPVDTKACRNEDVLPDGTLVGREWFVTYHTYAMGRMERIWGENCGEFLPERWVENGVCRAESPFRFPVFHAGPRMCLGKEMAYIQMKSIAAAVIERFEVGMAEKEKSPKYLLSLTLRMENGCPVVLKKRDPSLAI 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9644553 9646737 - Cp4.1LG08g13400.1 Cpe08g01337 474303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01337 508 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PANTHER CYTOCHROME P450 13 500 - -
Cpe08g01337 508 Pfam Cytochrome P450 74 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Cpe08g01337 508 Gene3D Cytochrome P450 19 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe08g01337 508 PANTHER CYTOCHROME P450 94B3-LIKE 13 500 - -
Cpe08g01337 508 SUPERFAMILY Cytochrome P450 30 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01337 Cpe-Chr8:9644553 Cpe18g00897 Cpe-Chr18:8079669 5.86E-141 dispersed
Cpe20g00858 Cpe-Chr20:7734937 Cpe08g01337 Cpe-Chr8:9644553 1.39E-41 dispersed
Cpe03g01694 Cpe-Chr3:12908986 Cpe08g01337 Cpe-Chr8:9644553 8.83E-100 transposed
Cpe03g00411 Cpe-Chr3:2302259 Cpe08g01337 Cpe-Chr8:9644553 0 wgd
Cpe03g00438 Cpe-Chr3:2495052 Cpe08g01337 Cpe-Chr8:9644553 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01337 - - csv:101211731 832.787