Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01338 ATGGGATTCATAGAATGCCTTGCCCGTTTCTTTCAAAATGCAAGGCCTTACATCGCAGTCATCTCCCTCCAATTCGGCTATGCCGGGATGAACATCATCTCCGTCGTCTCCCTCAACCGTGGTATGAGCCATTACGTCCTCGTCGTCTACCGCCACGCCTTTGCCACTGCTGTCATGGCTCCTTTTGCACTCGTTCTCGAGAGGAAAGTAAGACCCAAGATTACGTGGAAGATTTTCATTCAGATGTTTGTTCTCGCTCTTCTTGGGCCACTGATCGATCAGAATTTCTACTACGTCGGGCTGAAAATGACATCCCCAACGTACTCTTGCGCCATAAGCAACATGCTTCCTTCGATGACATTCATCATGGCAGTCCTTTGCAGGATGGAGAAGCTGGACTTGAGGAAAGTGAGATGCCAAGCCAAGTTGTTTGGAACAATAGTGACGGTGATGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCATCAACTTCTTCTGGACCGAGCAAGCCCGCCACCCGAACTCGCAGCCAACGGCGGATGCGGCTGCGCTCAACCACCACGACGACGGAGAGTTCATCAAAGGCTCAATTTTGCTCATCATTGCCACTCTAGCTTGGGCGGGGTTCTTCATTCTCCAAGTCATAACCTTGAGAAAATACACCGCCCATCTTTCTCTCACCACCATGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTCGCTATGGAACACCGCCCCTCCGCCTGGGCCATCGGCTGGGACATGAACCTTCTCGCCGCCGCATATGCGGGCGTTGTGGCATCTGGGTTGGCGTATTATGTGCAAGGCTTGGTTATGAAGACAAGAGGGCCAGTTTTTGTTACAGCTTTTAGCCCTTTGTTGATGGTGATTGTTGCTTTCATGGGCTCTCTCATCTTGGCTGAGAAGATTTACGTTGGAGGGATAATTGGAGCAGTGGTGATTGTAATGGGGCTGTACTCAGTTTTGTGGGGGAAGTACAAGGAAGGCAAAGAGAAGGAAGTGGGAGAGGGTGTTGAAGAAGCAGTGAAAGGCGGTGAATTGCCTGTAATAAATGAAGGCATTATTCAAAAGAACTACGAGGGTTTGGCCATTAGTATGCCTGCACCTGTCATGGTCAAGAAGCTTCAAGCCGCTAACGAAGAATAA 1182 49.58 MGFIECLARFFQNARPYIAVISLQFGYAGMNIISVVSLNRGMSHYVLVVYRHAFATAVMAPFALVLERKVRPKITWKIFIQMFVLALLGPLIDQNFYYVGLKMTSPTYSCAISNMLPSMTFIMAVLCRMEKLDLRKVRCQAKLFGTIVTVMGAMLMTFYKGSVINFFWTEQARHPNSQPTADAAALNHHDDGEFIKGSILLIIATLAWAGFFILQVITLRKYTAHLSLTTMVCFLGTLQAIVVTLAMEHRPSAWAIGWDMNLLAAAYAGVVASGLAYYVQGLVMKTRGPVFVTAFSPLLMVIVAFMGSLILAEKIYVGGIIGAVVIVMGLYSVLWGKYKEGKEKEVGEGVEEAVKGGELPVINEGIIQKNYEGLAISMPAPVMVKKLQAANEE 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9650478 9651993 + Cp4.1LG08g13350.1 Cpe08g01338 474304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01338 393 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Cpe08g01338 393 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Cpe08g01338 393 PANTHER WAT1-RELATED PROTEIN 11 368 IPR030184 GO:0016021|GO:0022857
Cpe08g01338 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 338 - -
Cpe08g01338 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Cpe08g01338 393 PANTHER WAT1-RELATED PROTEIN 11 368 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g01338 Cpe10g00243 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00437 Cpe-Chr3:2492246 Cpe08g01338 Cpe-Chr8:9650478 1.55E-71 dispersed
Cpe03g00439 Cpe-Chr3:2497955 Cpe08g01338 Cpe-Chr8:9650478 9.53E-77 dispersed
Cpe07g00390 Cpe-Chr7:2529138 Cpe08g01338 Cpe-Chr8:9650478 5.06E-59 dispersed
Cpe08g01338 Cpe-Chr8:9650478 Cpe09g00479 Cpe-Chr9:3157687 9.85E-132 dispersed
Cpe11g00228 Cpe-Chr11:1217523 Cpe08g01338 Cpe-Chr8:9650478 1.17E-53 dispersed
Cpe11g00862 Cpe-Chr11:6998686 Cpe08g01338 Cpe-Chr8:9650478 1.18E-53 dispersed
Cpe03g00412 Cpe-Chr3:2306202 Cpe08g01338 Cpe-Chr8:9650478 5.69E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01338 - - bhj:120090189 616.305