Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01349 ATGCCGTTGAACCCTTGTGGGGCGACATCAAAGGAAGCTGTGTCCATGGAAGAAGAGAGCTGCACGGAGGCGATTGACGACACGCGCTTGACTGAGAAAACGGGGAGCAGTTTCTTTATTAACTCTCAATCTTCGAAAATACCAACTGCGGATAGCGGTTGCTTTTCGACTGATTCCGGGGGTTGGGACTCAAAGGATCCGAGGATTGTGAATTGTCCCTCTCCGGAGCATAGTGGTGGTAGTGAACAGGAGTTCTCAGGCGAGCCGGCGTCGTCTCAAGGCTCGGGTTCTGGAAATTGCGGTTCCGGCGTCTCTGAAGGGATAACTTGCCCATCTTCCAATGGGGAGTATTACGATGTCATTGTCGATCAGAAGATTAAATCAGAGGAAATAGGGAAAATTTGCATGCCGAAGAGGAAGAAAGACCTGGATGAAGGAAACCCGGATTTGAGATCTGCCAAGTATCGAAGGTCATCTGAACCTGTAGAAAGTTCCAATCCCCAATTGAGTTCCTGTGCTCTAAATGAGGATGAAGAGAAGAGGAAGGCGAGGTTGATGAGGAATAGAGAGAGTGCGCAGCTTTCCAGGCAGAGGAAGAAGCATTATGTGGAGGAGTTGGAGGATAAATTGAGAGCTATGCATTCAACCATTGCTGAATTGAATAGTAAGATATCATATGTGATGGCTGAGAATGCAGGGCTGAGACAGCAGCTGAGTGGTAGTGGTATGTGTCAGCCTCCTCCTCCTGGTATGTATCCTCATCCCTCAATGGCCCCAATGTCTTATCCGTGGATGCCATGTCCTCCGTATGTTGTTAAACCGCAAGGGTCTCAGGTCCCTCTGGTTCCAATTCCGAGATTAAAGCCCCAACAGCCGGCCCCTGCAGCAAAGGGGAAAAGGAATGTGAGTAAGAAGGCTGAGGGAAGAACTAAGAAGGTTGCGAGTGTTAGTTTTCTGGGTCTGTTGTTCTTTATTATGCTTTTTGGTGGTCTAGTTCCTATAGTGAATCTCAGATTTAGAAATGTTGGAGTTCCTGGCACGTTAGCATTTGTTGGTGATAGGTTATACAATCAAAACCGTGGAAGGGTTTTGAGAGTCGATAAGTATTCGAATTTATCTAATGGTGTGAATGTAGGAACTCCTCGCGGGAAATCTGATACTTTGAACCTCTTACAATGTGAGGAAATTCATAGGAAAGGGCGAGACTTGAAATTCGATCAACAACGAAAAGGATCGCAGCATATGCATGATTCAGATGAGTCTAGTAAGCTTGGAAATGCTAGTGAACCTCTTGTTGCTTCTTTATACGTCCCAAGGAATGACAAGTTAGTGAAGATTGATGGAAACTTAATAATCCATTCTTTCCTGGCAAGCGAGAAAGCTATGGCCTCCAGCAGGGCTTCTGATAAGGACAAGAGTAGGGAGACTGGACTTGCGATTCCTAGAGATCTTAGTCCAGCCATCACCATCCCCAACATCAGGGAAAGTGGTGGTAAACATCCTCATCCGTATAGAAATCCTGCCGAACAGCCAAAGGCACTTACTTCAGGTTCAGCCAACAATTTAAAGGACCATATCAAGGCGACCGCAGCTGATGGTAAACTCCAACAGTGGTTCCGAGAAGGTCTTGCAGGACCGATGTTGAGTTCTGGCTTGTGCACCGAAGTGTTCCAGTTCGACGTTTCCTCAACATCTCCAGGAGCAATAATTCCAGCATCGTCAATTGCCAATACTTCTGGAACGCATCGTAAGAATGCTACTCAACTGAATAAGGGAAGGAATAGGAGAATCCTGGGTGGTCTTCCAGTTCCCCTAGGTGGATCAAGTTTCAACATCACAGAAGAACCTGTTGGAAACCCACGCAAAGACAGCTTTCCAGGTAACAACAAAACAGCTTCGTCTATCGTAGTTTCTGTGCTCATTGATCCAAGGGAAGCTGGGGACAGTGAAGTTGACGGTGTGATAACGCCGAAGTCGATTTCGAGAATATTTGTCGTTGTGTTGCTGGATAGTGTCAAGTATGTCACGTATTCATGTGTCCTCCCACGCTCGGGTCCTCACCTTGTGTCTACTTAA 2076 46.58 MPLNPCGATSKEAVSMEEESCTEAIDDTRLTEKTGSSFFINSQSSKIPTADSGCFSTDSGGWDSKDPRIVNCPSPEHSGGSEQEFSGEPASSQGSGSGNCGSGVSEGITCPSSNGEYYDVIVDQKIKSEEIGKICMPKRKKDLDEGNPDLRSAKYRRSSEPVESSNPQLSSCALNEDEEKRKARLMRNRESAQLSRQRKKHYVEELEDKLRAMHSTIAELNSKISYVMAENAGLRQQLSGSGMCQPPPPGMYPHPSMAPMSYPWMPCPPYVVKPQGSQVPLVPIPRLKPQQPAPAAKGKRNVSKKAEGRTKKVASVSFLGLLFFIMLFGGLVPIVNLRFRNVGVPGTLAFVGDRLYNQNRGRVLRVDKYSNLSNGVNVGTPRGKSDTLNLLQCEEIHRKGRDLKFDQQRKGSQHMHDSDESSKLGNASEPLVASLYVPRNDKLVKIDGNLIIHSFLASEKAMASSRASDKDKSRETGLAIPRDLSPAITIPNIRESGGKHPHPYRNPAEQPKALTSGSANNLKDHIKATAADGKLQQWFREGLAGPMLSSGLCTEVFQFDVSSTSPGAIIPASSIANTSGTHRKNATQLNKGRNRRILGGLPVPLGGSSFNITEEPVGNPRKDSFPGNNKTASSIVVSVLIDPREAGDSEVDGVITPKSISRIFVVVLLDSVKYVTYSCVLPRSGPHLVST 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9718011 9723703 + Cp4.1LG08g13520.1 Cpe08g01349 474315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01349 691 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 238 IPR004827 GO:0003700|GO:0006355
Cpe08g01349 691 MobiDBLite consensus disorder prediction 402 423 - -
Cpe08g01349 691 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 51 690 - -
Cpe08g01349 691 MobiDBLite consensus disorder prediction 42 59 - -
Cpe08g01349 691 MobiDBLite consensus disorder prediction 138 158 - -
Cpe08g01349 691 Coils Coil 203 223 - -
Cpe08g01349 691 CDD bZIP_HY5-like 181 232 - -
Cpe08g01349 691 Coils Coil 175 195 - -
Cpe08g01349 691 MobiDBLite consensus disorder prediction 462 518 - -
Cpe08g01349 691 SUPERFAMILY Leucine zipper domain 180 238 IPR046347 GO:0003700|GO:0006355
Cpe08g01349 691 MobiDBLite consensus disorder prediction 159 173 - -
Cpe08g01349 691 Gene3D - 178 244 - -
Cpe08g01349 691 SMART brlzneu 176 240 IPR004827 GO:0003700|GO:0006355
Cpe08g01349 691 Pfam bZIP transcription factor 177 238 IPR004827 GO:0003700|GO:0006355
Cpe08g01349 691 MobiDBLite consensus disorder prediction 76 103 - -
Cpe08g01349 691 MobiDBLite consensus disorder prediction 402 425 - -
Cpe08g01349 691 MobiDBLite consensus disorder prediction 464 478 - -
Cpe08g01349 691 MobiDBLite consensus disorder prediction 42 103 - -
Cpe08g01349 691 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 51 690 - -
Cpe08g01349 691 MobiDBLite consensus disorder prediction 138 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00460 Cpe-Chr2:2612716 Cpe08g01349 Cpe-Chr8:9718011 6.48E-06 dispersed
Cpe07g00288 Cpe-Chr7:1900392 Cpe08g01349 Cpe-Chr8:9718011 8.12E-08 dispersed
Cpe08g01349 Cpe-Chr8:9718011 Cpe11g00334 Cpe-Chr11:1775675 8.54E-07 dispersed
Cpe02g00881 Cpe-Chr2:6246997 Cpe08g01349 Cpe-Chr8:9718011 1.68E-137 transposed
Cpe03g00417 Cpe-Chr3:2330568 Cpe08g01349 Cpe-Chr8:9718011 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49937 PF00170 bZIP_1 2.30E-10 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01349 K25783 - csv:101215342 952.97