Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g01357 | ATGACTTGTGGGGCTCGATTGCTTGTGTTGGATTTTGTGCTGGCTTTTATGTGGGTATGGTCGGGAACTTTGATTAAGATCTTTGTTTTTGGGACATTGGGATTTGGAAATGATCCGGTCGGTGAGATTGTGAAGGCTTCCTTTTCGATTCTCAACATGTTTGTGTTTGCGTTTTTGTCGAAAATTTGGAATGGGGCTTCTTATAATCCTCTTAACATCTTGTCTGATGCTTTTTCTGGGGATTCCAGTAGCTTTCTCTTCCTTGCTGGTGCCAGAATCCCTGCTCAGGTACTTGGAGCCATTAGTGGTGTTAGGCTGATTATCCAGACAATCCCTGAAGCAGGACGAGGGCCTCATTTGAACGTTGGCATCCATCACGGTGCTCTCACAGAAGGATTGTTAACATACGGCATTGTCCTAATCTCGCTTGGACTGTCCACGACACTCCCAGGAAATTTCTTCATGAAGACATGGATCTCCAGCTGCTCCAAGTTAACTCTTCAGATTCTTGGTTCTGACTTAACCGGTGGCTGCATGAACCCTGCCTCTGTAATAGGATGGGCGTATGCTCGTGGGGAACATATAACCAAAGAACACCTTTTTGTATACTGGATTGCTCCAATTCAAGGAACCATACTTGCGGTGTGGACGTTTAAGTTACTATTTCGACAACCAAACGAGGAGAAAGTGAACACGAAGAAGAAATCTGAA | 711 | 44.73 | MTCGARLLVLDFVLAFMWVWSGTLIKIFVFGTLGFGNDPVGEIVKASFSILNMFVFAFLSKIWNGASYNPLNILSDAFSGDSSSFLFLAGARIPAQVLGAISGVRLIIQTIPEAGRGPHLNVGIHHGALTEGLLTYGIVLISLGLSTTLPGNFFMKTWISSCSKLTLQILGSDLTGGCMNPASVIGWAYARGEHITKEHLFVYWIAPIQGTILAVWTFKLLFRQPNEEKVNTKKKSE | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9764765 | 9766546 | - | Cp4.1LG08g13550.1 | Cpe08g01357 | 474323 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g01357 | 237 | SUPERFAMILY | Aquaporin-like | 6 | 235 | IPR023271 | - | |
Cpe08g01357 | 237 | PANTHER | AQUAPORIN SIP2-1-RELATED | 5 | 237 | IPR044226 | GO:0015267 | |
Cpe08g01357 | 237 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe08g01357 | 237 | PRINTS | Major intrinsic protein family signature | 88 | 107 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe08g01357 | 237 | PRINTS | Major intrinsic protein family signature | 130 | 148 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe08g01357 | 237 | PRINTS | Major intrinsic protein family signature | 161 | 183 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe08g01357 | 237 | PRINTS | Major intrinsic protein family signature | 201 | 221 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe08g01357 | 237 | Pfam | Major intrinsic protein | 93 | 217 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe08g01357 | 237 | Gene3D | Glycerol uptake facilitator protein. | 5 | 235 | IPR023271 | - | |
Cpe08g01357 | 237 | PANTHER | AQUAPORIN SIP2-1-RELATED | 5 | 237 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe08g01357 | Cpe19g00188 | CCT | |
Cpe03g00425 | Cpe08g01357 | CCT | |
Cpe08g01357 | Cpe10g01037 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g01357 | Cpe-Chr8:9764765 | Cpe19g00188 | Cpe-Chr19:1531992 | 3.62E-29 | dispersed | |
Cpe03g00425 | Cpe-Chr3:2384379 | Cpe08g01357 | Cpe-Chr8:9764765 | 1.22E-143 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g01357 | K09875 | - | csv:101214379 | 375.941 |