Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01365 ATGGAGATCTTACAGGCTCTCGATGCTCAGGTTCTCATTGGCTTAGCCACCGCCCTGGTTGCCATTGTTGCTGGTGCCTTTTTCCTTGTCTCCTCCAGAAAATCAGCATCCAGAGCCTGCTTGGATCCTGAGAACTTTAAGGAGTTTAAGCTTGTTAAGCGCACGAAGCTGAGCCATAATGTGGCAAAGTTCACTTTTATACTTCCCAAGACCGATTCAATTCTTGGTCTTCCTATTGGACAGCATCTAAGTTGCAGGGGAAAGGATAGCCAAGGTGAAGAGGTTATTAAATCTTACACCCCAGTTACCTTGGACTCTGATGTTGGATATTTTGAGCTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCGCATCATTTTCGAGAAATGCGTATGGGGGACTTTCTTGCTGTGAAGGGACCAAAGGGAAGTTTTAAGTATCAACCTGGTCAAGTTAGAGCATTTGGGATGCTCGCTGGAGGCTCTGGCATTACACCCATGTATCAAGTTGCTCGGTCTATATTAGAAAACCCGAACGACAAGACAAAGATTCACCTTATTTATGCCAATGTTACACTTGAAGATATTCTTTTGAAGGAGGAATTGGATCTTCTTGCCAAGAGATACCCTGATCGCTTCAAGATCTACTATGTCTTGAACCAGCCTCCGAAAGTTTGGGATGGCGGCGTCGGGTTTGTGTCTAAGGAAATGATTCGAGCGCATTGCCCTGCACCTGCCTCTGACATTCAGATTTTGCGGTGTGGTCCGCCGCCGATGAACAAGGCCATGGCTGCCCACCTTGATGCTCTTGGATATACACCTGAAATGCAGTTCCAGTTCTAG 843 46.14 MEILQALDAQVLIGLATALVAIVAGAFFLVSSRKSASRACLDPENFKEFKLVKRTKLSHNVAKFTFILPKTDSILGLPIGQHLSCRGKDSQGEEVIKSYTPVTLDSDVGYFELVIKMYPQGRMSHHFREMRMGDFLAVKGPKGSFKYQPGQVRAFGMLAGGSGITPMYQVARSILENPNDKTKIHLIYANVTLEDILLKEELDLLAKRYPDRFKIYYVLNQPPKVWDGGVGFVSKEMIRAHCPAPASDIQILRCGPPPMNKAMAAHLDALGYTPEMQFQF 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9811681 9816204 + Cp4.1LG08g13680.1 Cpe08g01365 474331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01365 280 CDD cyt_b5_reduct_like 49 280 - -
Cpe08g01365 280 PRINTS Cytochrome B5 reductase signature 75 86 - -
Cpe08g01365 280 PRINTS Cytochrome B5 reductase signature 97 104 - -
Cpe08g01365 280 PRINTS Cytochrome B5 reductase signature 133 147 - -
Cpe08g01365 280 PRINTS Cytochrome B5 reductase signature 156 175 - -
Cpe08g01365 280 PRINTS Cytochrome B5 reductase signature 194 205 - -
Cpe08g01365 280 PRINTS Cytochrome B5 reductase signature 250 258 - -
Cpe08g01365 280 Pfam Oxidoreductase FAD-binding domain 49 147 IPR008333 -
Cpe08g01365 280 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 44 148 IPR017927 GO:0016491
Cpe08g01365 280 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 280 - -
Cpe08g01365 280 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 136 276 IPR039261 -
Cpe08g01365 280 SUPERFAMILY Riboflavin synthase domain-like 41 149 IPR017938 -
Cpe08g01365 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 156 175 IPR001709 GO:0016491
Cpe08g01365 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 194 205 IPR001709 GO:0016491
Cpe08g01365 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 250 258 IPR001709 GO:0016491
Cpe08g01365 280 Gene3D - 138 280 IPR039261 -
Cpe08g01365 280 Gene3D Translation factors 38 137 - -
Cpe08g01365 280 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 280 IPR001834 GO:0016491
Cpe08g01365 280 Pfam Oxidoreductase NAD-binding domain 157 263 IPR001433 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01090 Cpe-Chr7:9643883 Cpe08g01365 Cpe-Chr8:9811681 1.95E-60 dispersed
Cpe08g01365 Cpe-Chr8:9811681 Cpe10g01086 Cpe-Chr10:6608643 6.57E-159 dispersed
Cpe08g01365 Cpe-Chr8:9811681 Cpe19g00231 Cpe-Chr19:1918564 1.35E-172 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01365 K00326 - csv:101212931 513.072