Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01382 ATGATCAACGAACATGAATCTGCTTCAAGTTCAGCTCTTGCTTGGCGTTGGACCGTTGAAGCCCTTGCAAGTTTCAAGGAAGTGAAACACTCTCTATTGCGTGATGTAATTGATGAGGGTAAAGAATTACCTGAGGTTACAAGAAAGAACGCTGGGGAAATGATTGCTTTGAGATGCTTGGAGGGTTTGTTTGGCCCTTTAAATTACAGTGGAGAAAATGGCCCTCCTGCTGAACAATCAAAAGTTATGTTCGATTCATCTGAGTGCTGTGAAGATGTTCTTAAACGCGTATGTAAGGAGACTTCTAAATCTGCCTTAAGAATGGCTGAACCAGATATGTCAAAATGGGATGTTAGTCCCTTTATTGCTCAAAAAAGAGCATCCATGCGGTGTACATTGCTTCAGCTGCAAGATTCAATTCTTGATGGTACACATCCATATGCTGATTTCTTAATGCAGAAGAGTGGGTTGATGCCCGTAAAAATGCAGGATAGGATTTTTCTGAATAATGGCGATCTTAACGAGCTCTGCAGGAGACTAGATACTAGCTCTTCTGATCCTCAAGCTCAAAAGGAAACAGGCAGAGGAAGCCCTGTACTGCTTGAGGAAGAAAGAAGAAGACTGTCTGTGGCAGACCCATCTACTTCTAGTTTGTTACCATCTAAAAGGAGTATTGTTGATTTAACATCTGAAGATGAGGCAAGACAGTTACTTGGTTGTAATGATGGTTACGTGAATGCTAAGAGGCGTAAGGGGCTTGATGCACATACTTCGCATTCAGGACATGAAGTGGCTTCTTCACATGGAGCTGAGGTGTTTGAAGCTTCACTTGAAAGAGTTGTGCCACAAGAGAGAGATGATATTGATCATCAGATGACTTCGGTGGAAGACAAAGTTGTCGAGGAGGAGCATTTTGGGTCAAAGAAGTCAGGACAGTATACTGCTACTGATGAATTGCATCAGGTTGAATCAAGTACTCCTTGTTATACTACATTGCGACCTTCACAAGATGTTGAGATGGATGAAGTTATTAGTTTGGAGAAATCAAAAGATGGAAATGAACTGCCAGTTGAACAAAAAGCATCTAATAATTCTCCTGTTGAAGGCAACCTGCATGATATCATCACCGGCGATTCCAAGCATGACTTCGGGGTTGATAATCATGTAAATGAAATGAACACTCTGTCCCATTGTGGATTTCTGCCGAAGACCGTTGCTACCGATATTGATGTTGGCATGAATCCCGATGAGAAAGAGAAAGATATGTTAAGTGATAGTGATGGATACCATATTCAAACGATTGCAGCGAAAAAGAAAGAATTTATTAGTTCTCAATGTATGGCGGATCGTGATTCTTTTCTATTAGCTGAGGGGAGCGTTTGTGTGAAATGCAATGAAGGTGGTCAGTTATTGTCCTGTAATGTTAGTGATTGTCCTTTGGTGGTTCATGATAAGTGCTTGGATTCCTCAGCTAGGATGCATGGTGAAGGCGGTTTTAGTTGTCCATTCTGCTTATGCTCACTTGCTATATCAGAATACCTTGAAGCTAAGAAGAATGCTGCATTGGCAAAGAAAAATATTGCTACCTTTTTTCGTACTTGTTTGGGACAATACTCAATAGTTATTCAAGAGGCATTGCAACAAAAAGATCTTGATCCTTCACGAAATGCTAGAGTTGAGGATGCTGCTAAAATTAGTGAACAACACTTGGAAAATCAAGACAATCAAGTAACTCTAGATGGAGAACATGTAAAAGAAGCTGTTAACCATCAATCCCCGACAGTTACAGATATTGAGCGAAGAATAGAGCTGTCAAAGTCATTGCAAATTCCTAATTCCAATCGCCGAGAAAACGAGGCAAGTTCTTCGAGAGTTGCGCCCGATGTTTTATCTGGAGAGAAAGACGGCGATGAATTGGTGAACCAAGAGTGTCAAGGAAATGTTGCAGAACTGAAAGATGGTCTAGAAGCCACAGAGCAACATGACATTTATGATACTCTCCACGAAGATCAAGGGCCAGTTGAAGCAGCGGGTATGCAAGAAGGTTTACAGTACCAAACTGATGACAAGGAAGAGGAACCTTCTTATGCTATAAATATAGGAGGAGAAAAATATTCTGATGATGATGACAATGATCAGTCTATCATTTCTAGATATTCCATAAGATTTCGACGGAAATATCATCAGTTAGAAGCACGAACATGGGATAAAGATGAAGAGCAGAGACTCGAGAATCATGGCTCAAAAACATGTGAAAAAGAAGAGCCCGTGAACTGCAAAAATGAACTGAGAGACAAAAAATCCCACTCTCCACTTCTTAAGCCATGGAAGAAAGGCCCTTCCCGAGGCAAAGGCGGCCCTCTCAACGCCTCCTGCGAGTACCGTGGCGTCCGGCAGCGGACTTGGGGCAAGTGGGTGGCTGAGATCCGCGAGCCCAAGAAGCGCACCAGGCTCTGGCTGGGCTCCTTCGCCACTGCTGAAGAGGCCGCCATGGCTTATGATCAAGCTGCCACTAGACTCTATGGCCCTGATGCTTATCTCAATCTTCCCCACTTGCAGCCAAATTCTAGTGCTGCTAAATCTAATATCTTCAAATGGGTTCCTTCTAAAAACTTCATTTCTATGTTCCCTCATCATCGCCCTGCCGGTTTCATGCTTAATCTCAATGCTCAGCCTAGTGTTCATCTCATTCATCAGAGGCTTCAGCAGCTTCAAACCTCTCGTGGCTTTCTCACTCCTTCCAAGAAAGTTGAAGACAAGAGAGAAACAGAGGGAGAGAAGGACGATGAAGCGCCGGTGGACGACGAGGCGGTGACGACGACGACGACAATAAGAGCTGTGGAAGAGAAACCACAAATTGATCTAAACGAGTTTCTACAACAACTTGGGATTATGAAAGAAGAAGAGGAGAAAGTGATTGAATCATCAGAAGGAGAGGAAGGGAATGGAGGCTGTTGTTTGGGATCAGAATCATCTAATAATAATTTGAAAGATCATTACAGCGATGAACTTGAAGTACTTAGTGACAAAAGCTTTAACTGGGATTCCATAATGGACGTGCATGCCAATATTGAAGATCTTCATCACCACCATCATCATCAAATTGGAAACTTTGAAGTTTATGATTATGGTGCGTCCGAGTCAGTAAAGGCGGTCGCCTTCAGCTTCATGACTGAAGACGAGGTTCGCAAACACAGTGCTGTAAAAGTTACTGCACCCATATTGTTAGATGCTATGGGCAGGCCCGTAGCTGGCGGACTTTATGATCCAGCCATGGGTTCTTTAGATGAGACAACACTTTGCAAATCTTGCGGACAAAGGCCTTTCTACTGCCCCGGTCATTGTGGTCACATTGACCTTGTTTCTCCAGTGTATAATCCCTTGCTATTTATTATTCTCCATAATCTTCTACAACGCACTTGTTTCTCGTGCCACCATTTTCGGGCTGGCGGATCCCAGGTTGAAAAATGTGCATCTCAACTGGAGCTTATTTTAAATGGTGATGTTGTTAAGGCGAAAGAGTTGGATTCAGAATTGCTAACTGAGTCTTCAGATTCAAAGCATAGCAATGAAATGCAGAATATGCAACCAAAAAAATGGACCTCTCTTCAATTTTCTGAGGCCATATCTGCTGTGAATAAATTTTTGAAGCCCAAACAGAGAGAGTGCAAAAATTGTGGTGCCAAAAATCCTAAGATTACTAGACCAACTTTTGGTTGGCTTCACATGACTGGCTTGCCAGGAGCTCACAAGAGGGCCAATGCTATTAGAGGATGCAAGCCTGCGAGTGTGAGTAGTGGGGCTGAAGGAATATCCTCAATTGAGGAAGAGAATACGGTTCCGCAAACTACTGTTATCAATATGTCGGAAGTAGATGTATTTGATGACACTGCAACCAAGGCCTCTGTAGAAGATTCTGAGGAAGTTTCTCCTGAAATTTTTGTGCCAAAAAATTTCTCCGCAGGACATTTGTTGCCGTCTGAGGTTAAGCATATTTTGAAGCGTTTGTGGAAAAATGAAGCTATGCTCTGTTCGTTTATTAGTGATATTCAGCATCAGGGATATGGAAATAAAGCAGGCCACTCCATGTTTTTCTTAGAGGCTGTTCTAGTCCCTCCAATTAAGTTCCGCCCCCCTGCAAAAGGAGGCGATTCTATAATGGAGCATCCTCAAACTGTGTTACTGAACAAGGTGCTACAGTCCAATATATCATTAGGAAATGCTCATGCTAACAAATCAGAACACTCAAAGATAGTCAGGCTATGGATGGATCTTCAACAATCTATCAATGTTTTGTTTGATAGCAAAACTGCATCTGGTCCAGGTCAAAAAGATGTTTCTGTGGGAATATGTCAGTTATTGGAGAAGAAGGAAGGCATGTTTCGTCAGAAGATGATGGGAAAGAGGGTTAACTTTGCGTGCCGATCTGTCATTTCACCAGATCCCTACTTAGCAGTTAATGAGATTGGAATTCCACCTTATTTTGCATTGAGATTGACCTATCCGGAGAGAGTGACTGCTTGGAATGTTCAAAAGTTACGAAATGCTATAATTAATGGTCCTGAAACCCATCCAGGAGCCACACATTACATTGATAAGTTAGCTACAGTTAAGTTGAATTTGAAGCCAAGTCGGAAATCACGCATTTCTATCTCAAGGAAATTACCTTCCTCTCGTGGAGTGGTTGTCGATCAAGGAAGTGATGATTATGAATTTGAAGGGAAAATTGTGAATCGCCATTTGGAAGATGGAGATATTGTTCTTGTGAATCGACAGCCTACACTTCACAAGCCTAGTATTATGGCTCATGTTGTTCGTGTCTTAAAAGGAGAGAAGACTATTCGAATGCACTATGCAAATTGCAGCACGTATAATGCTGATTTTGATGGTGATGAAATGAACGTTCATTTTCCTCAAGATGAAATTTCTCGTGCTGAAGCTTACAACATTGTGAATGCAAATAACCAATATGTGAAACCCACCAGTGGTGAACCAATCAGAGCATTAATTCAGGACCACATTATAAGTGCTGTGCTTCTCACGAAGAAGGATACTTTCTTAAAATTTGACGAGTTTAGCCAGCTTCTCTATAGTTCTGGCATTTCAACATCCAGACCATGTGCTTCTTCAGATAAACCTGGGCAGAAGATTTTCATTTTAGATTTTGAATCCGAGATGCTACCTGTTCTTCCTGCCGTATGGAAACCAGAGCCTCTTTGGACAGGAAAACAGGTTGTCACAGCCTTATTGGACCATATCACTAGAGGGGCCCCACCATTTTGTGTAGAAAAAGATGTGAAAATTCCACGTGGTTTTTTTAAGTGCAGACATACGGGAAATAATTCTTCCAATGTCAAAGTGGCCGATGGTGATAAATCAAAGAGAAAAAGAACTTGGAATGGAATTAAGTTGGGAAAAGGAGAAGTTCCTGATGAAGGGAACTCTAAAGAAGATGATTACTCAAAATTTGATAAATTGAAGGCAGAGCGTTTAGATGACGATAGCTTACTAATATTTAAAAATGAATTGGTGCGTGGTGTCATAGACAAGGCTCAATTTGGTGACTATGGCTTAGTGCATACAGTGCAGGAGCTTTATGGTTCAAATACTGCTGGCGTCTTGCTTTCTGTAATGAGTCGTTTGTTCACTGTTTATCTTCAGATGCATGGGTTCACATGTGGAGTAGATGATCTTTTGTTGATACAATGTATGGACAAGGAGAGAGAGAAGCAACTCCAAATCTGCGAGAATATCGGTGAACAGGTGCATCTTGGATTTCTTAAGGTTAAAGATGGAGAAAAATTAGATCCAATGGCACTGCAGTTGAATATTGAAAAAACTATTTCCAATAATGGAGAGCCAGCATTAACATCATTGGATAGAAAAATGACCAGCCAACTTAATGAAAGGACTGGTAACTCTAAGGTCCTCAAAGATTTGTTGTCTGAGGGCTTGCTAAAACCCTCTGTAAACAACTGCATTTCTCTGATGACGACTTCTGGGGCTAAAGGTGGTACGGCAAATTTTCAACAAATATCTTCACATTTAGGCCAGCAGCAGTTAGAAGGCAAACGAGTTCCTAGAATGGTGTCAGGAAAAACATTACCCTGCTTTCCGCCTTGGGATTGGGCATCACGAGCTGGAGGGTTCATTGTTGATCGCTTTCTTACTGGTCTTCGACCTCAAGAATACTACTTCCATTGTATGGCTGGCCGTGAAGGGTTGGTTGATACAGCAGTTAAGACATCTCGGAGTGGATATCTACAAAGATGCCTTATTAAAAATCTGGAGTCTCTAAAAGTTGGTTACGATCATACTGTTCGTGATGCAGATGGCTCCATTATTCAATTTCGTTATGGCGAGGATGGTGTAGATGTCCATAAAAATGCCTTTATTATAAAATTTGAAGCACTTGCAGCTAACTGCGAAATGATCTACCAAAAAAGTCATCATCAGCCTGACAGCTTTAATCAATACATCAATGAGCTGCCTTCAGTTCTTCAAGAGAAAGCAGAAGTCATATATAATTCTTTTGCGAAGGATAAGGCTCCTGGTCTGGGGCAAAAAGATGACTTTATCAGGCTGCTGGAGAATAAGTACCTGTCAAGTCTTGCACAGCCTGGAGAACCAGTTGGTGTACTCGCTGCTCAGTCTATCGGAGAGCCATCAACACAAATGACGTTGAACACATTTCATCATGCTGGGCGTGGTGAGATGAATGTGACTCTTGGAATTCCCCGCCTTCAAGAGATTTTGATGACTGCTTCACAAGATATTAAGACACCAATTATGACATGCCCATTGCGAGAGGGCTACTCAATGGATGATGCAAAGTGTCTTGCTAATAAGTTGAAGAAGATTACAGTAGCTGACATAATAGAAAGTATGGAAGTAACTGTTGTGCCATTTTCGCAACGGAAGCGAGAGATATGCAGTATTTATAAGCTTGAAATAAGATTTTACCCACTTGAAAGTAATCCACAGCATGCTCATGTATCTTCAGAAGATTTGGAAGAAATTTTGGAATTTGTGTTCGTTAGGGAGTTGGAAGATTCAATCCAAAATGAAATGCTCTTACTATCACGAATTAGTGGTATAAAAAATTTTGTGCCCGACTCACAATCAAAGGGTTTGAGTGAAAGCGATAAAGTAAGTAGCTCACAACGTGAAGAAAATGATGATGATGATGAAGTTGGCAATGACTTAGATGTTGCTGAAGATCTTGGTTTTGACATGAAAAAACAAAAACTTCGAACTAATGATGAGATGGATTATGAAGATGATTCGGAAGAGGAACTCAATGTGAAAGAACCATCAGCAGGATTTGAAAGTGAAGTTGATCAAGGTGATGAGGCTGATATAACCAATGATGATACGATGGAAATTGTTAAAGACGCTACATCTGAGGATCAGACTGAGATAATAGATGTCTCAAAGTCCAATTCGAAAGGGAAAACAACCAAAACATCAAACAAAAAGAAGAAAGCTAAATCAGAATTCTCCAGAAAGGACTATGATAGAGCAATTTTTGTGGCAGCGAAGGGAAATCATTTTGAAGTCCATTTTAAGTTTACCAATGAACCTCATATTTTACTGACGCAGATTGCTCAGAGAACGGCCCAGAAGGTGTCTATCCAAAGCTCTGGCAAAATCATCCGCTGTCAACAAATTACATGCAAGGAAGGTCAGGTAATATACCACGGGAATGATATTAAGGTAAGAAAGAATATCAAACCAGAAGAAAAGGAAAAAGTTCCTGCATTGCAGACGACTGGAGTCGACTTTAAGACGCTCTGGGAGTTACAAGATGAGCTTGATGCTAGATATATATATTCCAATGACATTCATGCCATGCTACAAACATATGGAGTGGAAGCTGCTAGGGAAACAATAATAAGAGAAATTCGAAACATTTTCAGTTCATATGGGATATCAGTCAATATTAGACATCTAACTCTAATTGCTGATTATATGACTCATTCTGGTGGATACCGACCAATGAATCGATTAGGAGGCATAGCCGACTCGATATCTCCTTTCAGTCGAATGACTTTTGAGACGGCTGCAAGGTTCATTGTTCAAGCTGCATACCATGGGGAAGTAGACACCTTGGAAACTCCATCTGCTAGAATCTGTCTTGGTTTGCCAGTAAAGATGGGAACCGGTAGTTTTGATTTGATGCAGAAAATCGATGTCTGA 8199 41.21 MINEHESASSSALAWRWTVEALASFKEVKHSLLRDVIDEGKELPEVTRKNAGEMIALRCLEGLFGPLNYSGENGPPAEQSKVMFDSSECCEDVLKRVCKETSKSALRMAEPDMSKWDVSPFIAQKRASMRCTLLQLQDSILDGTHPYADFLMQKSGLMPVKMQDRIFLNNGDLNELCRRLDTSSSDPQAQKETGRGSPVLLEEERRRLSVADPSTSSLLPSKRSIVDLTSEDEARQLLGCNDGYVNAKRRKGLDAHTSHSGHEVASSHGAEVFEASLERVVPQERDDIDHQMTSVEDKVVEEEHFGSKKSGQYTATDELHQVESSTPCYTTLRPSQDVEMDEVISLEKSKDGNELPVEQKASNNSPVEGNLHDIITGDSKHDFGVDNHVNEMNTLSHCGFLPKTVATDIDVGMNPDEKEKDMLSDSDGYHIQTIAAKKKEFISSQCMADRDSFLLAEGSVCVKCNEGGQLLSCNVSDCPLVVHDKCLDSSARMHGEGGFSCPFCLCSLAISEYLEAKKNAALAKKNIATFFRTCLGQYSIVIQEALQQKDLDPSRNARVEDAAKISEQHLENQDNQVTLDGEHVKEAVNHQSPTVTDIERRIELSKSLQIPNSNRRENEASSSRVAPDVLSGEKDGDELVNQECQGNVAELKDGLEATEQHDIYDTLHEDQGPVEAAGMQEGLQYQTDDKEEEPSYAINIGGEKYSDDDDNDQSIISRYSIRFRRKYHQLEARTWDKDEEQRLENHGSKTCEKEEPVNCKNELRDKKSHSPLLKPWKKGPSRGKGGPLNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQAATRLYGPDAYLNLPHLQPNSSAAKSNIFKWVPSKNFISMFPHHRPAGFMLNLNAQPSVHLIHQRLQQLQTSRGFLTPSKKVEDKRETEGEKDDEAPVDDEAVTTTTTIRAVEEKPQIDLNEFLQQLGIMKEEEEKVIESSEGEEGNGGCCLGSESSNNNLKDHYSDELEVLSDKSFNWDSIMDVHANIEDLHHHHHHQIGNFEVYDYGASESVKAVAFSFMTEDEVRKHSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDETTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKCASQLELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLKPKQRECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEENTVPQTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSAGHLLPSEVKHILKRLWKNEAMLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNKVLQSNISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIVNRHLEDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLYSSGISTSRPCASSDKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGAPPFCVEKDVKIPRGFFKCRHTGNNSSNVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKEDDYSKFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSVMSRLFTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDPMALQLNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQFRYGEDGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSFAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDEVGNDLDVAEDLGFDMKKQKLRTNDEMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVAAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV 2732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9925491 9946230 + Cp4.1LG08g13840.1 Cpe08g01382 474348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 913 927 - -
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 2371 2401 - -
Cpe08g01382 2732 SMART rpolaneu7 1362 1681 IPR006592 GO:0003677|GO:0003899|GO:0006351
Cpe08g01382 2732 Pfam RNA polymerase Rpb1, domain 3 1656 1898 IPR007066 GO:0003677|GO:0003899|GO:0006351
Cpe08g01382 2732 Gene3D - 2098 2142 - -
Cpe08g01382 2732 Gene3D - 2680 2723 - -
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 1799 1818 - -
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 2413 2453 - -
Cpe08g01382 2732 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1 1051 2724 IPR015699 GO:0003899|GO:0006351|GO:0008270
Cpe08g01382 2732 SUPERFAMILY DNA-binding domain 793 851 IPR016177 GO:0003677
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 2466 2497 - -
Cpe08g01382 2732 CDD AP2 792 852 IPR001471 GO:0003700|GO:0006355
Cpe08g01382 2732 Pfam RNA polymerase Rpb1, domain 1 1047 1464 IPR007080 GO:0003677|GO:0003899|GO:0006351
Cpe08g01382 2732 PRINTS Ethylene responsive element binding protein signature 794 805 IPR001471 GO:0003700|GO:0006355
Cpe08g01382 2732 PRINTS Ethylene responsive element binding protein signature 816 832 IPR001471 GO:0003700|GO:0006355
Cpe08g01382 2732 ProSiteProfiles Zinc finger PHD-type profile. 458 507 IPR019787 -
Cpe08g01382 2732 Gene3D RNA polymerase II, clamp domain 1039 1166 IPR044893 -
Cpe08g01382 2732 CDD RNAP_I_RPA1_N 1054 2104 - -
Cpe08g01382 2732 PANTHER DNA-DIRECTED RNA POLYMERASE 1051 2724 IPR045867 GO:0003899|GO:0006351
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 606 620 - -
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 909 935 - -
Cpe08g01382 2732 Gene3D - 1458 1660 - -
Cpe08g01382 2732 Gene3D - 2038 2096 - -
Cpe08g01382 2732 CDD RNAP_I_Rpa1_C 2199 2727 - -
Cpe08g01382 2732 ProSitePatterns Zinc finger PHD-type signature. 461 504 IPR019786 -
Cpe08g01382 2732 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 456 544 IPR013083 -
Cpe08g01382 2732 Gene3D - 2287 2547 - -
Cpe08g01382 2732 Gene3D RNA polymerase Rpb1, domain 3 1661 1901 IPR042102 -
Cpe08g01382 2732 Gene3D RNA polymerase ii 1500 1579 - -
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 739 772 - -
Cpe08g01382 2732 ProSiteProfiles AP2/ERF domain profile. 793 850 IPR001471 GO:0003700|GO:0006355
Cpe08g01382 2732 Gene3D - 1920 2036 IPR038120 -
Cpe08g01382 2732 SUPERFAMILY FYVE/PHD zinc finger 451 508 IPR011011 -
Cpe08g01382 2732 Gene3D AP2/ERF domain 793 851 IPR036955 GO:0003700|GO:0006355
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 739 790 - -
Cpe08g01382 2732 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 1048 2730 - -
Cpe08g01382 2732 SMART rav1_2 793 856 IPR001471 GO:0003700|GO:0006355
Cpe08g01382 2732 Pfam AP2 domain 792 842 IPR001471 GO:0003700|GO:0006355
Cpe08g01382 2732 Pfam RNA polymerase Rpb1, domain 5 2058 2671 IPR007081 GO:0003677|GO:0003899|GO:0006351
Cpe08g01382 2732 MobiDBLite consensus disorder prediction 606 637 - -
Cpe08g01382 2732 Pfam RNA polymerase Rpb1, domain 2 1467 1652 IPR000722 GO:0003677|GO:0003899|GO:0006351
Cpe08g01382 2732 Pfam RNA polymerase Rpb1, domain 4 1959 2051 IPR007083 GO:0003677|GO:0003899|GO:0006351
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00398 Cpe08g01382 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02506 Cpe-Chr1:20591652 Cpe08g01382 Cpe-Chr8:9925491 6.13E-27 dispersed
Cpe07g00124 Cpe-Chr7:705295 Cpe08g01382 Cpe-Chr8:9925491 5.96E-24 dispersed
Cpe07g00392 Cpe-Chr7:2537568 Cpe08g01382 Cpe-Chr8:9925491 1.15E-33 dispersed
Cpe08g01382 Cpe-Chr8:9925491 Cpe14g01043 Cpe-Chr14:8747902 1.03E-10 dispersed
Cpe15g00668 Cpe-Chr15:7308756 Cpe08g01382 Cpe-Chr8:9925491 8.28E-07 dispersed
Cpe03g00398 Cpe-Chr3:2167771 Cpe08g01382 Cpe-Chr8:9925491 1.29E-83 transposed
Cpe03g00397 Cpe-Chr3:2164443 Cpe08g01382 Cpe-Chr8:9925491 1.08E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49942 PF04998 RNA_pol_Rpb1_5 1.40E-88 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01382 K02999 - csv:101205880 2821.57