Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01391 ATGCTGCAACAGCGTCCGTTTACGTATTTTAGTGTCGTAGTCTATTCGATGATTCTCACTTCGCTGGCTCGGGCGTTCACTAACAGGCCGGATGTTGCAGCTCTTCAGGATCTGTACGGTGCTTTGAACTATCCACATGAGCTTATAGGATGGAGAAAATATGGTGGTGATCCTTGTGTGGAATCATGGACGGGAGTATCTTGCTCCGGGTCATCTGTAATATACCTTAAACTCCGCGATTTAAACCTCACTGGGAATCTTGGAGGGCAGCTTAACAACCTCAACAATTTGAAGCAACTGGATGTTAGCTCGAATAGACTTACGGGTGAAATTCCCCATAGCTTGCCTCATAATGCAACTCATATAAATATGGCATTCAACCATTTAAGCCATAACATTCCACATACTTTATCTTACATGGGAAATCTCCGACATTTAAATCTGAGCCATAATACTCTATCTGGTGTGATTGGGAATGTGTTCACTGGTTTACAGAATTTGAGAGAGATGGATTTGTCATATAATGACTTCACTGGAGATTTGCCAAGATCATTAGGTTCCTTGACAAACATGTCTAGACTGTTCTTGCAGAACAACAAATTTACAGGATCAGTTGCCTACTTGTCTCCACTTCCATTAACTGACTTGAACATCCAGGACAATTGTTTTAGTGGCATTATTCCAGAAAATTTTAGAACTATTCCAAATTTGTGGATTGGGGGAAATAAGTTTCATGCAAGAGTCAATTCTCCACCCTGGGATTTCCCCCTGGAAAAAGCACCTATGGTGCGAAACATCAGTGGTCCTCCAACAACCAAGTCGAATTCAATCCAGAATTATCCCTCTCGTGGTGTCAGGCAAGAGAAGAAAAGGCTTGGTCCTGGTGGAATACTTCTCCTGGTTGGCGGGTTAACACTAGTTGTAACCTTTGCAGCTCTCTTCATTGTATTCGCCATTAGCAATATGATACACCGATCATTCGCTCTGGGCAAAGCTGAAGATGGTTTGTCCACCGCACCAGAAGAAAACTCACAGAGCTTGCCCCTGAGTTCTCTACTCATGGGTGGTCAAAGGTCTATAGCTTCATTAAATCGCACGAGAACTGAGAAAGTTTCTGGAAGACAAGGTTTCTCAAAGAGATGCAATCTCCCAGTGGGAACAAAAATGTACACTCTGGCAGAGCTTCAATCAACCACAAACAACTTTAGTCAAGAGAATCTTCTTGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCGGTGAAAAACATCAACATGGGAGCACTCTCTCTTACAGAAGAAGAGAAATTTCTGGATGTCGTATGGACTGCATCCCGTTTGAGGCACCCGAACATTGTTACACTGCTTGGATATTGTGCAGAGCATGGACATTATTTCCTCGGATATGAATATGTTCGAAATCTGTCTCTTGATGAAGCTTTACACTGTGAATCTTTTATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCTAGGGCTTTAGATTATTTGCATAGAAGTTTTTTCCCGCCAGTTGCTCACTGCAATCTGAAGGCTGCCAACATCTTACTTGACGAAGAACTGATTCCTCGTATTTATGGTTGTGGGCTGTCTGTTGCGAGGCGACTTGTGACCAGCAGAGTTAAAACGAAGGCTTCTGAGATTGCCAGTGGTGACAGAGGCTACCTTGCACCTGAACATGGCCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCCTTTGGAGTGTTGCTTTTGGAGCTTGTCACTGGAAGAAAACCATTTGACAATTCGAAACCCAGGAAAGAACAATCGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAGTCATTAAAGGAACATTTTCCTCCAAGTCCCTCTCTCGCTTTGTCGATATTATCTCCCTTTGCATACAGCCTGTGAAGGAATTCCGACCACCAATGTCTGAAATAGTGGAACACCTAACAAATCTTCGGAGAAAGATGGAGACGACGAAACATGCTGCATCAGAAGGAACTGAAATGGATCCTTTTGAGAAGTCTTTTCGTTCAGCTAACACTGGTTTCTTAAGCTCGCCAGCTTACAGCTATTCTGCCACCTCAGTTTAG 2178 43.53 MLQQRPFTYFSVVVYSMILTSLARAFTNRPDVAALQDLYGALNYPHELIGWRKYGGDPCVESWTGVSCSGSSVIYLKLRDLNLTGNLGGQLNNLNNLKQLDVSSNRLTGEIPHSLPHNATHINMAFNHLSHNIPHTLSYMGNLRHLNLSHNTLSGVIGNVFTGLQNLREMDLSYNDFTGDLPRSLGSLTNMSRLFLQNNKFTGSVAYLSPLPLTDLNIQDNCFSGIIPENFRTIPNLWIGGNKFHARVNSPPWDFPLEKAPMVRNISGPPTTKSNSIQNYPSRGVRQEKKRLGPGGILLLVGGLTLVVTFAALFIVFAISNMIHRSFALGKAEDGLSTAPEENSQSLPLSSLLMGGQRSIASLNRTRTEKVSGRQGFSKRCNLPVGTKMYTLAELQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINMGALSLTEEEKFLDVVWTASRLRHPNIVTLLGYCAEHGHYFLGYEYVRNLSLDEALHCESFMPLSWTVRLQIALGVARALDYLHRSFFPPVAHCNLKAANILLDEELIPRIYGCGLSVARRLVTSRVKTKASEIASGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDNSKPRKEQSLVKWASSRLHDNESLEQMVDPVIKGTFSSKSLSRFVDIISLCIQPVKEFRPPMSEIVEHLTNLRRKMETTKHAASEGTEMDPFEKSFRSANTGFLSSPAYSYSATSV 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10000505 10007203 - Cp4.1LG08g13960.1 Cpe08g01391 474357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01391 725 SUPERFAMILY Protein kinase-like (PK-like) 379 678 IPR011009 -
Cpe08g01391 725 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Cpe08g01391 725 ProSiteProfiles Protein kinase domain profile. 402 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01391 725 Gene3D Transferase(Phosphotransferase) domain 1 480 704 - -
Cpe08g01391 725 SUPERFAMILY L domain-like 27 238 - -
Cpe08g01391 725 Pfam Leucine rich repeat 120 177 IPR001611 GO:0005515
Cpe08g01391 725 Pfam Leucine Rich Repeat 96 116 IPR001611 GO:0005515
Cpe08g01391 725 Gene3D Phosphorylase Kinase; domain 1 362 479 - -
Cpe08g01391 725 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 693 - -
Cpe08g01391 725 SMART LRR_typ_2 164 188 IPR003591 -
Cpe08g01391 725 SMART LRR_typ_2 94 118 IPR003591 -
Cpe08g01391 725 SMART LRR_typ_2 140 163 IPR003591 -
Cpe08g01391 725 Gene3D Ribonuclease Inhibitor 28 264 IPR032675 -
Cpe08g01391 725 Pfam Protein kinase domain 403 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01391 725 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 5 693 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00382 Cpe08g01391 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00382 Cpe-Chr3:2047911 Cpe08g01391 Cpe-Chr8:10000505 0 dispersed
Cpe08g01391 Cpe-Chr8:10000505 Cpe20g00626 Cpe-Chr20:3917624 4.11E-177 dispersed
Cpe03g00381 Cpe-Chr3:2041342 Cpe08g01391 Cpe-Chr8:10000505 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62579 PF00069 Pkinase 2.40E-33 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01391 - - csv:101204194 1140.56