Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00008 ATGAACATGGGTTTTGCCCCTTTTGGTGTTGGTAATGGAGGATCTTCATCATCTTTCTCCAATTTATCACCTTTGGCGCCGCCCTTTACTCTTGATCGTTCGGTTACTAAACCTTTATCAACCCCACTTGTGGATATCACTGAACCTGAACCTGAACCTGAATTTGGGGTTGGGGTTGGGGTTGGGGTTCCCCTCAACCCTTTGCAACACAATTGGCTCCCTTCCACCTCCAAAACCTCAGCCCATGACTTCGATTGGTTACCCTTCTCTACTGGCTCTGGATACCCCAGGTCGCAGGCTATGATGGACCCTTCTCATAACCATGGACCTCTTTTGGGTCGTCTTACAATCACTTCAACTGACCTCTCCTCATACCACGGATCCTCTGATGGAGTAACAACTAGTATGGGCAAACCAAAACCCTATTATCCTTCTTATGCCGCAACTTCATCTAACAAAGCTGGTCCTACGGCCATTGTTGATCAACCAAGTTATGATTGGCTATCAAACTCGCACGTTGTTAAATTCAAAGGGCCCCCGTGCACCGACTTCTCTCGCGGATCTTCAGCTTCTGAGAGATCAACTAAAGAGGCTTCACATTCTGTTGATGTGCTTGATCTGAATAAATGCAACGACTTTGTAAGAGAATATCCAAATGAGGAATTGTTTTCGGAGCGAAACCTTAACATTGAGAGAATTTCTAACATGGATGCTCATTCTGCATTTCCAGGATGTCATCCTAAGACTAGGACACCACCTTCCAATCCAGCCTCAAGTTCTCAAAACTCTCCATTTCTGAAAAAGCCTCCATATCTGGAAATCTCGAGAGAGCAAGATTCTAGACTGAACGTGACTACATCAATTGTCAATTCTCCCGCTACTTTTTCCATCAGACCATCTGTTGTCAGCACTGATTCTTTTGCCTGGAATGTCGGCTCATGTCATGTTTCAGATTATGGCTATGAAGCAAAACAAGGTGGTAACAACCTTTCCAATCTAAAGGAGCTTCTTCCAGTTAACTCTGAGAGCAAGGAATTCGTCAGTGCAGAGAATTATGATACATGTATAGATAAAAACGATCCCGTAATTACTGAGCCCTCATCAACCAAAATTCATGACTTGCGAAACAATATACATTCTGCTAAGGATTCGCCAGATCGTAGATTGAAGGCTGGAATGAGACTTCATATTCCCGATGCCAGTCCTCATTTTAGTTTGGACCCTAAAGGAATTGAAACTGCCACAACAACTGAGAGTTCCTCTGAAAGTTTTGATCAGTACAACCTTGCAGCAGTAGACTCACCTTGCTGGAAAGGAGTTCCAATTAATCAGATTTCTCCTTTTCAAGCATTTGAGATTGTTACACCGAGTCGTACGAAGATGTTGGAAGTTTACAACAGTGTGAATCTGTCATTGTCTCAAGTACCCCCGTCTACTGCTGAGGATACTGTGAAAGTCATAGTTCATGAACCAAATGAAAGCACGATAGGCAGCATTCTGGAAAAAGGTGCAACGTCTTCTCCAAAGATGCCTTCAGTTATTGTGCCTGCAGAACAGAAAAGTAGCAATTCTGTGAAAGCAGGAGAATTTTGTTCAAAAATGGGTTGCTTCCATCCAGCTACCAGTAGCGTCTATGAAACATTTGAAGATGGTGGTGACTTCTATTCTTCCTGTTCCATACCACAAAATAAATATAAGCATAATTTAGTGTCTGGAAAAAGGATTGGACGTACAAGTTGTACGGAAAAGCATGCAGATGCAAGATTAAATAGCGACAACTCTTCTGGAAATGGTTTAAATCATTTGTCGTTTGATGCTGCAGAACATGTCCAGAATTTGCCTTCTGAGCTGGTGAAGGCATTTCATGGAGAATCAACTTCAAAAGTTGATATCAGGATTTTGGTTGATACATTGCATAGTCTATCAGAGTTGCTCCTTGCACATTGTTCAAATGGTTTGGATGCATTACACCAAAAAGACGTCATGTCCCTCGAGACTGTGATGAATAACCTTGATGTGTGTATAAATAGCGTTGGATCACAAGGTTCTCTCTCACCTGAGCAAAGGACTTCACAAAGCCTTGAGCAGTTTCATCAGCTTCATGCGCATTTCCAGGATTTGGGAGTGCTCAAGTCCCAGTCCCAGATGACAAAGATTGAAGGTGAAAATTTGGAGTGTCTATCAAATGATCGAAATGGTGTCGAGGAAACGAATCGACACATATTATCTGTCAAGAAAGACAAAGAAGCTGCTGGCTCTCATCATCTTAGGAATGGGATTGACTCGATGAAAGAAGATAGCATGACCAAGGCTCTTAAGAAGGTTCTGAGTGAGAATTTTCATGACGATGAAGAACATCCTCAAACTCTCTTGTACAAGAATCTATGGCTTCAAGCAGAAGCTGCGTTATGTGCCTCCAATTTAAGAGCTCGTTTTAATAGTGCAAAGTCAGAAATGGAGAAACATGAATCACCAAAAGTGAAAGAACATGCCAAAAATCACAACCAACTATTCGTTTCTGGTGCATCTCCTGGTTCAAACACCATTGCGGAAGTGGCATCTAAGACTAAAGTTGGTTCTACCTCATTTGTTTCCGTCCAAACTTCCCCTACTGTGAGTGTCAGAAGTCATGCATCAGATGACGTGATTACTAGATTCAATATTCTCAAACACCGAGACGATGAAGCAAAGCTTAGGGATGCCGAAAATTCGGGAACACTATCTGATTTTGAGGTTTCAGTTAAACAAGGCATGGTTGAAAAATCCGCACTGGAGAAGGAACAAACTGCAGGCCCACATATGAAAGACATGGATTCTTCCTTCCCCTCTTCAAAGGTCAAGGGGAATGATTCTGGGCCAGCTCCTCGGTCGACTTCCCCCATCTTGACCAGGACCAGTCATATAGACGATGTTATGTCGAGATTTCAAATTCTGAAATCTCGAGACGAGCGCGTAAGTTCTTTGAATGCGGGAAAGGTGCAGAAAGTTACAAGTTCCCGTTGCAGTGAAATTGAGAAGGCGGCACTTGAAGGTGCCATCTCGATGATACATCATCCCGTTGCAGATAACAAAAATGAAGTTGATGATTTAGATGGTTCAGTAATGGGCAGACTAGATGTCCTAAGGAGTCGGGGAAACAACATAAGGCCAACTCCTGCAGGGGAAAACTTACAGGAGTATTGGACATCTGTTGAAAACAAAGTAAAAATGGAACCTTTCTTGCGGCCTGAAGCTGGGAAGGATAGTAGAAGCCATTTTGAGGGCAAGCTTCCTGCTGGTTGTTCTAATGGGTCCTCATCAGACTGGGAACATGTTCTCTGGTGCGATTGA 3330 42.94 MNMGFAPFGVGNGGSSSSFSNLSPLAPPFTLDRSVTKPLSTPLVDITEPEPEPEFGVGVGVGVPLNPLQHNWLPSTSKTSAHDFDWLPFSTGSGYPRSQAMMDPSHNHGPLLGRLTITSTDLSSYHGSSDGVTTSMGKPKPYYPSYAATSSNKAGPTAIVDQPSYDWLSNSHVVKFKGPPCTDFSRGSSASERSTKEASHSVDVLDLNKCNDFVREYPNEELFSERNLNIERISNMDAHSAFPGCHPKTRTPPSNPASSSQNSPFLKKPPYLEISREQDSRLNVTTSIVNSPATFSIRPSVVSTDSFAWNVGSCHVSDYGYEAKQGGNNLSNLKELLPVNSESKEFVSAENYDTCIDKNDPVITEPSSTKIHDLRNNIHSAKDSPDRRLKAGMRLHIPDASPHFSLDPKGIETATTTESSSESFDQYNLAAVDSPCWKGVPINQISPFQAFEIVTPSRTKMLEVYNSVNLSLSQVPPSTAEDTVKVIVHEPNESTIGSILEKGATSSPKMPSVIVPAEQKSSNSVKAGEFCSKMGCFHPATSSVYETFEDGGDFYSSCSIPQNKYKHNLVSGKRIGRTSCTEKHADARLNSDNSSGNGLNHLSFDAAEHVQNLPSELVKAFHGESTSKVDIRILVDTLHSLSELLLAHCSNGLDALHQKDVMSLETVMNNLDVCINSVGSQGSLSPEQRTSQSLEQFHQLHAHFQDLGVLKSQSQMTKIEGENLECLSNDRNGVEETNRHILSVKKDKEAAGSHHLRNGIDSMKEDSMTKALKKVLSENFHDDEEHPQTLLYKNLWLQAEAALCASNLRARFNSAKSEMEKHESPKVKEHAKNHNQLFVSGASPGSNTIAEVASKTKVGSTSFVSVQTSPTVSVRSHASDDVITRFNILKHRDDEAKLRDAENSGTLSDFEVSVKQGMVEKSALEKEQTAGPHMKDMDSSFPSSKVKGNDSGPAPRSTSPILTRTSHIDDVMSRFQILKSRDERVSSLNAGKVQKVTSSRCSEIEKAALEGAISMIHHPVADNKNEVDDLDGSVMGRLDVLRSRGNNIRPTPAGENLQEYWTSVENKVKMEPFLRPEAGKDSRSHFEGKLPAGCSNGSSSDWEHVLWCD 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 36343 40454 + Cp4.1LG09g00030.1 Cpe09g00008 474374

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00008 1109 MobiDBLite consensus disorder prediction 251 266 - -
Cpe09g00008 1109 PANTHER OS08G0157800 PROTEIN 3 1107 - -
Cpe09g00008 1109 MobiDBLite consensus disorder prediction 1076 1100 - -
Cpe09g00008 1109 MobiDBLite consensus disorder prediction 239 267 - -
Cpe09g00008 1109 MobiDBLite consensus disorder prediction 942 961 - -
Cpe09g00008 1109 PANTHER OS08G0157800 PROTEIN 3 1107 - -
Cpe09g00008 1109 MobiDBLite consensus disorder prediction 179 201 - -
Cpe09g00008 1109 MobiDBLite consensus disorder prediction 924 961 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00008 - - - bhj:120081084 1444.87
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe09g00008 Cpe14g00013 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00013 Cpe-Chr14:80169 Cpe09g00008 Cpe-Chr9:36343 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g951 . . Bda05g00147 . . . . . Cmo16g00015 Cmo18g01377 . . . . . . Cpe14g00013 . . . . . . . . . . . . . . Cone1ag1029 Cone5ag0736 . . . . . . . . . . . . . . . . . Cma16g00013 Cma18g01344 Car16g00012 Car18g01256 Cpe09g00008 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013112 1 1 0 0 0 0 2 0 0 1 0 0 2 1 1 2 0 2 2 0 1 1 2 1 1 1 1 2 1 1 27
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe09g00008 Cpe_Chr09 FPKM 11.215037 12.982673 1.29534 1.243238 1.020995 0.679473 0.711001 0.470727 0.361893 0.191757