Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00009 ATGGGGTCCTCGGGGCAAGGTTGTGAGGTCCAGATCACCCCCACCACCCAAGTGAGCGATGAAGAAGCACAGCTGTTCGCTATGCAGTTGGCGAGCGCTTCGGTTCTTCCAATGGTGCTGAAGGCCGCCATCGAGCTAGACGTGCTGGAGATCATTGCGGCGGCAGGGGAGGGGGCTTTGTTGTCCCCCTCACAAATAGCCTCTCACCTCTCCTTCTCCGGGGCCAAAACCCCAAACCCTGAGGCGGGTGTGGTTCTGGACCGCATGCTCCGGTTGCTGGCTTCCTACTCCATCCTCACTTACTCCCTCAATACTCTCCCCGATGGCTCACTCCAGAGGCTCTACGGCCTCGCCCCTGTAGCCAAGTTCTTGGTCAAGAATCAAGACGGCGTCTCCATCGCTCCCCTGTGTCTCATGAACCAGGACAAGGTCCTCATGGAGAGCTGGTACCATTTGAAAGATACGGTACTGGAAGGAGGGATTCCATTCAACAAAGCATACGGAATGACGGCGTTCGAATATCATGGAACAGATCCGAGATTCAACAGGGTGTTCAACAGGGGAATGTCCGACCATTCCACCATTACCATGAAGAAGATTCTAGAGACCTACAAAGGCTTCGAAGGCCTTAATTCAGTGGTGGATGTGGGCGGTGGGACCGGAGCTGTTCTCAACATGATAGTCTCCAAGTACCCTTCTATTAGGGGCATCAACTTCGACCTCCCTCATGTCATTCAGGACGCCCTTGCCTACCCAGGCGTCCAACATGTTGGGGGCGACATGTTTGTGAGCGTGCCCAAGGGGGATGCTATTTTCATGAAGTGGATCTGTCACGATTGGAGCGACCAGCACTGCCTGAAATTGTTGAAAAATTGCCACGATTCTCTGCCGGAGCATGGGAAGGTGATTGTGGCGGAATGCATTCTTCCGGTTGCACCAGACAGCAGCCTTGCCACCAAGGGAGTGATTCACATCGATGTCATAATGCTGGCTCACAACCCTGGAGGCAAAGAAAGGACCGAGCAGGAGTTCCACGCCTTGGCCAAGGCTGCTGGATTTCAAGGCTTCAAGGTCCACTCTTGTGCTTTCAACACATACATCATGGAATTTCTCAAGACTCTTTAG 1125 53.6 MGSSGQGCEVQITPTTQVSDEEAQLFAMQLASASVLPMVLKAAIELDVLEIIAAAGEGALLSPSQIASHLSFSGAKTPNPEAGVVLDRMLRLLASYSILTYSLNTLPDGSLQRLYGLAPVAKFLVKNQDGVSIAPLCLMNQDKVLMESWYHLKDTVLEGGIPFNKAYGMTAFEYHGTDPRFNRVFNRGMSDHSTITMKKILETYKGFEGLNSVVDVGGGTGAVLNMIVSKYPSIRGINFDLPHVIQDALAYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDQHCLKLLKNCHDSLPEHGKVIVAECILPVAPDSSLATKGVIHIDVIMLAHNPGGKERTEQEFHALAKAAGFQGFKVHSCAFNTYIMEFLKTL 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 41343 43723 + Cp4.1LG09g00040.1 Cpe09g00009 474375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00009 374 PIRSF O-mtase 7 372 IPR016461 GO:0008168
Cpe09g00009 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 372 IPR016461 GO:0008168
Cpe09g00009 374 PANTHER O-METHYLTRANSFERASE 6 372 IPR016461 GO:0008168
Cpe09g00009 374 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Cpe09g00009 374 PANTHER BNAA10G07270D PROTEIN 6 372 - -
Cpe09g00009 374 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
Cpe09g00009 374 CDD AdoMet_MTases 213 304 - -
Cpe09g00009 374 Pfam Dimerisation domain 38 94 IPR012967 GO:0046983
Cpe09g00009 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 370 IPR029063 -
Cpe09g00009 374 Gene3D - 7 124 IPR036388 -
Cpe09g00009 374 SUPERFAMILY Winged helix DNA-binding domain 19 127 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00826 Cpe-Chr8:6584025 Cpe09g00009 Cpe-Chr9:41343 2.39E-74 dispersed
Cpe08g01069 Cpe-Chr8:8132542 Cpe09g00009 Cpe-Chr9:41343 4.66E-77 dispersed
Cpe09g00009 Cpe-Chr9:41343 Cpe15g00724 Cpe-Chr15:7637403 1.15E-23 dispersed
Cpe09g00009 Cpe-Chr9:41343 Cpe15g00615 Cpe-Chr15:6843429 9.47E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00009 K13066 - csv:101204109 631.713