Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00015 | ATGATGAATGAAGCAAAACCAGCCCTCCAATCTTTGACACCAAGGGGCACTGCCCAATCTTCTCCTCCTGCAGTGTACTCCGGGCTACACCCTACCATCTGTATCGGAGACAACCGAGTTCCATTCTTCATTGGGCTTCGGCTCATTTGCGTTCCTCCCCCTGAACTCGACGAGTCACAACCCAACCCGAAAACCGATCTTTTTTGGTGGCAGTTGTGGGTGCGATATAAGACTCACGTGCGTTGGAATGAGGAACATGATATGGGTGGGAACACATCCAATGCTGGAGCCAATTGGCCTTGTCATGACAAGTGTCAGAATGTTGCTGATATGGAGAAGCCTAACAGGGGAAGGACGAGAGATGAAAACCCAAACCTTGTTGTGGAACTCGGGCGAGGTGAAGTCCTTAAAAGAAGAAGAAGAAGAAGATTTGAAGACTTTCTTGACGGTGGAGAACCAGCGGGCAGTTGGTTTCTTCCCCATCTGCAGCCACCGGAAACAGATCAAAGGCGTTCAAAAGCAAGGAAAAAGAATTCAGTGACCGGCAGGAGTGAAGGTAGGGGTCGCGACCATCAGCTTGAAGAGGTTGGATTAAGCGGGCATTGGAAAATGAAGAAGAGAAGCGGTAGACACTGTGTTTCCAATTATATTCACTCTGCTAGCAATCCCATTTCCCACTGCGCGAGTCGTAACAAATCGAATGACCTCTATCTCAGCTCGCCTTTCCACTTGGTCTCTTTCAAGTCGGTTTCACTTAGAGGCGACTTTCTCCACGACGGGACTCAACCTTTCGATCATCGGAGGGCTTATCCGAATCCCAACAAGAACCTGAATGAGAGGTTGAGCAGGGGCGGTTGTTTTATGAGCACTTATGGGGACCCGCCTGAGGTGTGGTCTGGAGATGGGATTGTGATTCGTGGGAGTAATTCAAGCTTGGATGGTCGTGGTGGTGGCGGTGGTGGAAGCGCTAACTCTGGTTCTGGTGGAAGTGGGTTTGGCGCGAACTCGAATGATGGGTGTTGGGGTGGTTCCAGTTTGGGTCCTAATTTTCCAACCCCGAAGGAAATCTCCAAGGGGCTTGATAAGTTTGTAATTGGTCAGGAGAGAGCTAAAAAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGTATCTATCATGAATCGTTGCAAAGGCCTACAGGAGATACGGTTACCAACAAAGCTGATGCTGTTGATGATGATAAAGTGGAACTTGAGAAAAGTAACATCCTTCTGATGGGGCCAACAGGCTCAGGGAAAACACTTCTCGCTAAAACCTTGGCACGCTTTGTTAATGTTCCTTTTGCGGGATATGTTGGAGAAGACGTGGAGTCTATATTGTACAAACTTCTGATGGTTGCTGATTATAATGTGGCAGCTGCACAGCAGGGCATTGTTTACATAGACGAAGTTGATAAAATTACCAAGAAGGCAGAGAGCCTTAACATTAGCAGAGATGTGTCAGGAGAGGGCGTGCAGCAGGCATTATTAAAAATGCTAGAAGGAACGATTGTAAACGTGCCTGAGAAAGGTGCAAGAAAGCATCCCAGAGGTGAAAATATCCAGATTGATACTAAGGACATTCTCTTCATATGTGGGGGTGCCTTCATTGACTTAGAAAAAACTATCTCAGAAAGGCGACAAGATTCTTCTTTAGGGTTTGGGGCCCCAGTTCGTGCAAACATGAGGGCAAGTGGTGTTACAGATGCCATCGTTGAAAGTAGTGACCTCATTGCATATGGGTTAATACCCGAATTTGTTGGTCGATTCCCCATCCTCGTCAGTTTGTCAGCCCTAACAGAAGACCAACTTGTTCAGGTCTTGACAGAGCCAAAAAATGCGCTGGGAAAGCAGTATAGAAAGATGTTCCAGATGAATGACGTCAAGCTCCACTTCACAGAAAATGCCTTGAGATTAATTGCAAGAAAGGCAATGTCTAAGAACACTGGAGCACGGGGTTTGCGATCAATATTGGAGAATCTATTGATGGATGCTATGTACGAGATTCCTGATGTCAGAACAGGTGAGGATATAATCGATGCTGTTATCATTGATGAAGAATCCATTGGGTCAGACAGCACGGGTTGTGGCGCTAAAATTCTTTACGGAAAGGGAGCATTGGATCGCTATCTTTCAGGACAAAAGACTACAAGTCAGGGTTCCGAAAAAGAAGCAGAACCTGAAAGTGAAACAGATCTTCCTTCAGTTGCTGCCAGCAGCATACACCTGGGGAATACAGGAACAACCCCAGGGGGTAGAGACGACCAAGAAAGGAACCTCCATCTTTCGGATAGTATCGAGTGTGTATCATCTTCCGATGGTCTCGATGAGGATGAGATCCATCTGCATCACACTCTTCATTCTTATTCCCATTCTCATCATCATCCCGAGTTGTCAGCAACCAAGCCTCGCAATGGAAACAATAATAGCGCTGTAGCAGGCCCCACTGCCACTGCGCCGGCCACTAGCGTCCATGAATTGCTCGAGTGCCCTGTCTGTACCAATTCTATGTACCCTCCCATTCATCAGTGCCACAATGGACATACATTATGTTCTACATGTAAAACACGGGTTCATAATCGTTGCCCTACTTGTAGACAAGAGCTTGGAGACATTAGGTGCTTAGCACTGGAGAAGGTGGCAGAGTCACTGGAATTGCCTTGCAGATATTATTCCTTGGGATGCCCAGAAATATTTCCTTACTACAGTAAACTCAAGCACGAAGCATTGTGCAACTTCAGACCCTACAATTGCCCATATGCTGGCTCGGAATGCTCTGCTGTTGGGGATATTCCTTTCCTTGTTTCCCATCTGAGGGATGATCACAAGGTGGACATGCACACTGGATGCACATTTAACCATCGCTATGTGAAATCCAACCCAAGGGAAGTGGAGAATGCCACTTGGATGCTTACGGTTTTTCATTGTTTCGGTCAATACTTCTGCCTTCACTTTGAAGCCTTTCAGCTTGGGATGGCCCCAGTGTATATGGCTTTCCTTCGTTTCATGGGCGACGAGAATGAGGCGCGAACCTACAGCTACAGTCTGGAGGTGGGTGGATATGGGCGAAAACTGATATGGGAGGGCACCCCGCGAAGTATCAGAGATAGCCATCGAAAAGTGAGGGATAGCCATGATGGGCTGATGATTCAAAGAAATATGGCTCTGTTCTTCTCGGGTGGGGATAGGAAGGAACTGAAGCTGAGAGTTACGGGAAGGATATGGAAGGAACAAAACCCGGATGCTGGGGTCTGCATACCCAACCTTATCGAGTGTGTCTCGTCGTCCGATGGTCTCGATGAGGATGACATCCATTTGCACCACACTCTTCATCCTTATTCTCACTCTCATCATCACCCCGAGTTGTCAGCATCGAAGCCTCGTAATGGTAACAACAACAGCGCTGTGAACGACCCCACTGCCACTGCGCCGTCGACTAGCGTCCATGAATTGCTCGAATGCCCTGTCTGCACTAATTCTATGTACCCTCCCATCCATCAGTGCCACAATGGACATACCTTATGTTCTACTTGTAAAACACGGGTTCATAATCGCTGCCCTACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTAGCACTGGAGAAGGTGGCAGAGTCGCTTGAATTGCCTTGCAAGTATTATTCCCTGGGATGCCCTGAGATATTTCCGTACTATAGTAAACTTAAGCATGAGGCTCTATGCAACTTCAGACCCTATAGTTGCCCGTATGCTGGCTCGGAATGCTCTGCTGTTGGGGATATTCCCTTTCTTGTCGCCCATCTGAGGGACGATCACAAGGTGGACATGCACACTGGATGCACATTTAACCATCGCTATGTGAAATCCAATCCAAAGGAAGTGGAGAATGCCACTTGGATGCTTACTGTTTTTCATTGTTTCGGTCAATATTTCTGCCTTCACTTTGAAGCCTTTCAGCTTGGCATGGCCCCAGTCTACATGGCTTTCCTTCGATTCATGGGAGATGAGAATGAGGCACGAACCTACAGCTACAGTCTCGAAGTTGGTGGATATGGGCGAAAACTGATATGGGAGGGTACACCACGAAGTATTCGAGATAGTCATCGAAAAGTCAGGGACAGCCACGATGGATTAATTATTCAAAGAAATATGGCTCTTTTCTTCTCAGGCGGGGATAGAAAGGAACTGAAGCTAAGAGTTACAGGAAGGATATGGAAGGAACAAAACGCAGATGCTGGAGCCTGCATTCCGAACCTTTGTAGCTAA | 4269 | 47.22 | MMNEAKPALQSLTPRGTAQSSPPAVYSGLHPTICIGDNRVPFFIGLRLICVPPPELDESQPNPKTDLFWWQLWVRYKTHVRWNEEHDMGGNTSNAGANWPCHDKCQNVADMEKPNRGRTRDENPNLVVELGRGEVLKRRRRRRFEDFLDGGEPAGSWFLPHLQPPETDQRRSKARKKNSVTGRSEGRGRDHQLEEVGLSGHWKMKKRSGRHCVSNYIHSASNPISHCASRNKSNDLYLSSPFHLVSFKSVSLRGDFLHDGTQPFDHRRAYPNPNKNLNERLSRGGCFMSTYGDPPEVWSGDGIVIRGSNSSLDGRGGGGGGSANSGSGGSGFGANSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVTNKADAVDDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRASGVTDAIVESSDLIAYGLIPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLIARKAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIIDEESIGSDSTGCGAKILYGKGALDRYLSGQKTTSQGSEKEAEPESETDLPSVAASSIHLGNTGTTPGGRDDQERNLHLSDSIECVSSSDGLDEDEIHLHHTLHSYSHSHHHPELSATKPRNGNNNSAVAGPTATAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCRYYSLGCPEIFPYYSKLKHEALCNFRPYNCPYAGSECSAVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLMIQRNMALFFSGGDRKELKLRVTGRIWKEQNPDAGVCIPNLIECVSSSDGLDEDDIHLHHTLHPYSHSHHHPELSASKPRNGNNNSAVNDPTATAPSTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEALCNFRPYSCPYAGSECSAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPKEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQNADAGACIPNLCS | 1422 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 86520 | 107671 | - | Cp4.1LG09g00310.1 | Cpe09g00015 | 474381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 166 | 193 | - | - | |
Cpe09g00015 | 1422 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 350 | 691 | IPR027417 | - | |
Cpe09g00015 | 1422 | ProSiteProfiles | Zinc finger SIAH-type profile. | 1214 | 1274 | IPR013010 | GO:0008270 | |
Cpe09g00015 | 1422 | TIGRFAM | clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX | 349 | 696 | IPR004487 | GO:0005524|GO:0006457|GO:0051082|GO:0140662 | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 1132 | 1150 | - | - | |
Cpe09g00015 | 1422 | ProSiteProfiles | Zinc finger RING-type profile. | 837 | 873 | IPR001841 | - | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 155 | 193 | - | - | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cpe09g00015 | 1422 | SUPERFAMILY | RING/U-box | 825 | 876 | - | - | |
Cpe09g00015 | 1422 | SMART | AAA_5 | 413 | 565 | IPR003593 | - | |
Cpe09g00015 | 1422 | CDD | Sina | 951 | 1079 | - | - | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 808 | 823 | - | - | |
Cpe09g00015 | 1422 | SUPERFAMILY | TRAF domain-like | 1214 | 1406 | - | - | |
Cpe09g00015 | 1422 | ProSiteProfiles | Zinc finger RING-type profile. | 1161 | 1197 | IPR001841 | - | |
Cpe09g00015 | 1422 | SMART | ClpB_D2_small_2 | 606 | 696 | IPR019489 | - | |
Cpe09g00015 | 1422 | Pfam | AAA domain (Cdc48 subfamily) | 413 | 599 | IPR003959 | GO:0005524|GO:0016887 | |
Cpe09g00015 | 1422 | CDD | RING-HC_SIAHs | 835 | 873 | - | - | |
Cpe09g00015 | 1422 | SUPERFAMILY | TRAF domain-like | 890 | 1082 | - | - | |
Cpe09g00015 | 1422 | CDD | AAA | 414 | 515 | - | - | |
Cpe09g00015 | 1422 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 816 | 889 | IPR013083 | - | |
Cpe09g00015 | 1422 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1214 | 1269 | IPR013083 | - | |
Cpe09g00015 | 1422 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 890 | 945 | IPR013083 | - | |
Cpe09g00015 | 1422 | Gene3D | - | 605 | 705 | - | - | |
Cpe09g00015 | 1422 | SUPERFAMILY | RING/U-box | 1150 | 1200 | - | - | |
Cpe09g00015 | 1422 | CDD | Sina | 1275 | 1403 | - | - | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 309 | 330 | - | - | |
Cpe09g00015 | 1422 | CDD | RING-HC_SIAHs | 1159 | 1197 | - | - | |
Cpe09g00015 | 1422 | Gene3D | - | 346 | 604 | IPR027417 | - | |
Cpe09g00015 | 1422 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1120 | 1213 | IPR013083 | - | |
Cpe09g00015 | 1422 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE | 771 | 1089 | - | - | |
Cpe09g00015 | 1422 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE | 1096 | 1414 | - | - | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 1118 | 1150 | - | - | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 794 | 823 | - | - | |
Cpe09g00015 | 1422 | Pfam | C-terminal, D2-small domain, of ClpB protein | 606 | 676 | IPR019489 | - | |
Cpe09g00015 | 1422 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1270 | 1402 | IPR008974 | GO:0005515 | |
Cpe09g00015 | 1422 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 946 | 1078 | IPR008974 | GO:0005515 | |
Cpe09g00015 | 1422 | MobiDBLite | consensus disorder prediction | 720 | 742 | - | - | |
Cpe09g00015 | 1422 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 1096 | 1414 | - | - | |
Cpe09g00015 | 1422 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 771 | 1089 | - | - | |
Cpe09g00015 | 1422 | Pfam | Seven in absentia protein family | 879 | 1078 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Cpe09g00015 | 1422 | Pfam | Seven in absentia protein family | 1203 | 1402 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Cpe09g00015 | 1422 | ProSiteProfiles | Zinc finger SIAH-type profile. | 890 | 950 | IPR013010 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00976 | Cpe-Chr2:8752742 | Cpe09g00015 | Cpe-Chr9:86520 | 0 | dispersed | |
Cpe02g01467 | Cpe-Chr2:12624226 | Cpe09g00015 | Cpe-Chr9:86520 | 4.35E-21 | dispersed | |
Cpe09g00015 | Cpe-Chr9:86520 | Cpe12g00474 | Cpe-Chr12:4513988 | 9.23E-168 | dispersed | |
Cpe10g01153 | Cpe-Chr10:8364181 | Cpe09g00015 | Cpe-Chr9:86520 | 1.43E-151 | dispersed | |
Cpe19g00084 | Cpe-Chr19:653947 | Cpe09g00015 | Cpe-Chr9:86520 | 6.48E-153 | dispersed | |
Cpe14g00039 | Cpe-Chr14:210301 | Cpe09g00015 | Cpe-Chr9:86520 | 0 | transposed | |
Cpe01g01997 | Cpe-Chr1:17053508 | Cpe09g00015 | Cpe-Chr9:86520 | 4.52E-22 | transposed | |
Cpe14g00038 | Cpe-Chr14:204288 | Cpe09g00015 | Cpe-Chr9:86520 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00015 | K03544 | - | csv:101215939 | 885.56 |