Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00023 ATGGCTTTGTTGAGTCCTCGATTGCATAGATTCCGCTTATTAACCAAGCTCCACCAAGCCTCTGCCTCCAAACCCACTAACGCAAATCAGCTCACTGTCAGAAGAAAAACCGGATGCTGCTATGCCATAGCTGTTGATGCTCCATCTTCTTTAACAGATGCTGCGGGAATCAGATGGGGTTCGACCACTTTGCAAGGCTTGCGGGAAGAAATGGAGGACGATGCTGTTGTGCGGTCTGATGGTCTTAATGGCTTCTTGTTTGCTGCAGTGTTCGATGGCCATGGTGGCTGTTCCTCCGTCAAGTTCCTCAGGTGGGAACCCAACAGGGCATCTTGTGGTGAAATCTTTAGGATTTATGAACATATGGAGGAGCTGTACAAAGACTGCCTAACAGCTGTACAAGGTGGTCTGCTGTTGAATGGAGGGGATTTTGAAGTGATCAAAGCGGCTTTGGAGAAGGCTTTTGATGATACTGATAAAAGATTACTCCCTTTGCTAGAGGCAGCTGGGAAGGAAGATGAATCTGGTTCCACTGCAACTGTTGCATTCATACGAAATGATGTTATGTTCATTTCACATGTTGGTGACTCTTGTGTTGTGTTGTCACGTTCCGGAGGAGCACAGGTATTGACGAGTTCTCATCGGCCTTATGGAAACAACACCACCTCACTGCAAGAAATTAGAAGAATTAGAGAAGCAGGTGGATGGATCGTTAACGGGAGAATCTGTGGAGACATCTCTGTATCTCGTGCATTTGGTGACATACGATTCAAGACGAAGAAATACGAGATGCTGAGAAAAGGAGTTGAAGAAGGGAGATGGTCTGAAAAGTTTGTTTCTCGTGTACAGTTCAATGGAGATTTGGTAACCGCATCACCAGAAGTTCTTCAGCTTACCCTCGGATCAAATGTCGAGTTTGTACTGATAGCATCGGATGGCCTATGGGATTACATGAATAGCTCCGATGCGGTTAAGTTTGTTCGGAATCAATTGAGTCAGCATGGTGATGTTCAGTTAGCTTGTGAAGCCCTCGCACAAGCAGCCTTGGACAAAGGGTCACAAGACAATATCAGCATTATCATGGCTGATTTGGGGCGGACAGATTGGCAGAATTTGCCCCTCCAGCAAGACAACGTCATATTTGAAGTGGCTCAAGCTTTTGGTACGATTGGGGTCGTTTCTTTCGGTATTTGGTGGGCGTCCTCTATTTTCTGTCTTTAA 1221 45.95 MALLSPRLHRFRLLTKLHQASASKPTNANQLTVRRKTGCCYAIAVDAPSSLTDAAGIRWGSTTLQGLREEMEDDAVVRSDGLNGFLFAAVFDGHGGCSSVKFLRWEPNRASCGEIFRIYEHMEELYKDCLTAVQGGLLLNGGDFEVIKAALEKAFDDTDKRLLPLLEAAGKEDESGSTATVAFIRNDVMFISHVGDSCVVLSRSGGAQVLTSSHRPYGNNTTSLQEIRRIREAGGWIVNGRICGDISVSRAFGDIRFKTKKYEMLRKGVEEGRWSEKFVSRVQFNGDLVTASPEVLQLTLGSNVEFVLIASDGLWDYMNSSDAVKFVRNQLSQHGDVQLACEALAQAALDKGSQDNISIIMADLGRTDWQNLPLQQDNVIFEVAQAFGTIGVVSFGIWWASSIFCL 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 134197 139957 + Cp4.1LG09g00180.1 Cpe09g00023 474389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00023 406 Pfam Protein phosphatase 2C 60 357 IPR001932 -
Cpe09g00023 406 ProSiteProfiles PPM-type phosphatase domain profile. 58 364 IPR001932 -
Cpe09g00023 406 Gene3D - 57 370 IPR036457 -
Cpe09g00023 406 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Cpe09g00023 406 SMART PP2C_4 48 362 IPR001932 -
Cpe09g00023 406 SUPERFAMILY PP2C-like 56 365 IPR036457 -
Cpe09g00023 406 PANTHER PROTEIN PHOSPHATASE 2C 57 6 401 - -
Cpe09g00023 406 CDD PP2Cc 57 364 IPR001932 -
Cpe09g00023 406 PANTHER PROTEIN PHOSPHATASE 2C 6 401 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00023 Cpe-Chr9:134197 Cpe02g00317 Cpe-Chr2:1677448 5.37E-28 dispersed
Cpe14g00030 Cpe-Chr14:165788 Cpe09g00023 Cpe-Chr9:134197 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00023 K04457 - csv:101218076 664.455