Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00031 ATGTCGTCTACGCTACTAGAGGTGACCCGGTCTTCGCACGAGGAGGTGGAGCGACTTGAGCGGCTTGTAGTGAAGGAGCTCCAAAATGAACCTGCTTCCGGCCGGGACCGTTTGCTACAGAGTCACCGAGTCCGCAACATGATCGACACCATCGTGTCCACCACCGACAAGCTCGTTGAGATTTATGAAGATAAGGATAATGCCAGGAAAGATGAGATTGCGGCACTTGGAGGGCAAACAACTTTAGGAACCAACGTTTTTAGTGCATTTTATGATAGACTGAAAGAGATTCGTGAATACCATAGAAGGCATCCAGCTGCACGGGTTGTTGATGTTAATGAGGAGGATGGTCTACTCAAAGAGGAACCACAAATTGAGTTCAGTGGAGAGGGGTTGGCAGCATTGGGGCTGAAGACTGGTGGTACAGTTCAGCAGCGTGCAGAGAGGCTTTTCCTCACTAAGCATACACCTCTTCAATTGTTGGACAAAAAACACTTTGCAAAACCGTCCCGGCAATCATTTCAGAATGGGGCAGCTGCAGCTTCACTACACAATGAAAATTTGAAACAAGTTGCTCTGATGGAAGCAAAAATTGAAAAATTGTGCGATCTTCTGGATGAGACTATCGACAGAACCAAAGACAACATTGTTAAGAAGCAAGCCTTAACATATGAGGAAATTGAAGCAGAACGTGAGGAGGAAGAGACGCAAGCTGAGTCTGAAAGTGATGATGACGAGCAGCAAATTTATAATCCGCTCAAGCTCCCAATGGGTTGGGATGGGAAACCCATACCTTACTGGCTCTACAAGCTTCATGGCCTTGGTCAGGAATTCAAATGCGAGATATGCGGGAACTATAGTTATTGGGGTCGTAGAGCTTTTGAGCGACATTTCAAGGAATGGCGTCATCAGCATGGAATGCGTTGCCTTGGTATTCCAAATACAAAGAACTTCAATGAAATCACATCAATTGAGGAGGCAAAAGACTTGTGGAAAAGAATTCAAGAACGACAAGGAGTTAGCAAGTGGCGACCAGATCTGGAAGAAGAATACGAAGATAAGGAGGGTAACATTTACAATAAGAAGACATATACAGATCTGCAACGCCAGGGGTTGATATAA 1122 45.28 MSSTLLEVTRSSHEEVERLERLVVKELQNEPASGRDRLLQSHRVRNMIDTIVSTTDKLVEIYEDKDNARKDEIAALGGQTTLGTNVFSAFYDRLKEIREYHRRHPAARVVDVNEEDGLLKEEPQIEFSGEGLAALGLKTGGTVQQRAERLFLTKHTPLQLLDKKHFAKPSRQSFQNGAAAASLHNENLKQVALMEAKIEKLCDLLDETIDRTKDNIVKKQALTYEEIEAEREEEETQAESESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKRIQERQGVSKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 176026 184454 - Cp4.1LG09g00270.1 Cpe09g00031 474397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00031 373 ProSiteProfiles Zinc finger matrin-type profile. 278 309 IPR000690 GO:0003676|GO:0005634|GO:0008270
Cpe09g00031 373 PANTHER BNAA03G01920D PROTEIN 1 130 - -
Cpe09g00031 373 Pfam SF3a60/Prp9 C-terminal 254 373 IPR024598 GO:0000398|GO:0003723|GO:0005681
Cpe09g00031 373 PANTHER SPLICING FACTOR SF3A-RELATED 1 130 - -
Cpe09g00031 373 Coils Coil 217 244 - -
Cpe09g00031 373 PANTHER SPLICING FACTOR SF3A-RELATED 130 373 - -
Cpe09g00031 373 PANTHER BNAA03G01920D PROTEIN 130 373 - -
Cpe09g00031 373 Pfam Replication stress response SDE2 C-terminal 131 168 - -
Cpe09g00031 373 Pfam Splicing factor SF3a60 binding domain 83 105 IPR021966 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00046 Cpe-Chr14:248300 Cpe09g00031 Cpe-Chr9:176026 2.01E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00031 K12827 - csv:101205916 448.743