Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00037 ATGAATTCAGCTCTCCACAGAGGGTTGGCATCTAGTTCTCATGGAAGTAGAGGAATTGAGAAGTCATTGAAATCTCCTTCTTGTAATAATCTCATGCCTGAAGGCTTGCGCTCCGGGAAGAGAATTCTTGATCCACAAGGGCCTTTTCTTCAAAGTTGGAACAAGATATTTGTGCTGTCTTGTGTGGTTGCTGTTTCATTGGATCCTCTGTTCTTTTATGTTCCTGTGATTGATAATAGAAACAAGTGTCTTAGGTTAGATGAGAAAGTGGAGACTGTAGCCTGTATATTGCGATTGTTTACAGATTTATTCTATGTCGTGCATATCGTTTTTCAGTTTCGTACAGGATTTATCGCTCCCTCTTCCCGAGTGTTTGGAAGAGGTGTTTTAATAGAAGATTCATGGGCAATAGCAATGAGGTATCTGTCATCATACTTTCTAATTGACATATTCTCAGTCCTCCCACTTCCACAGGTGAGGAATGTTTCTTGGGACACAAGAGTGATGATTTTGATAAACATCCATAAAATTAGAGGTTTGAGATCGTGGAATACAGAGAACTTGCTGAAACTTGCTGTATTATGTCAATTTGTGCCAAGGTTTCTTCGAATCTATCCTCTGTATAAAGAAGTTACAAGGACCTCTGGCATACTCATTGAAACTGCTTGGGCAGGAGCTGCGTTTAATCTCTTTCTCTACATGCTAGCCAGTCATGTATTTGGGTCAATCTGGTACTTATGTTCTGTAGAACGAGAAGCCCAATGCTGGCATGATGCTTGTAGCAAACATCCTGGCTGTAACCTTACTTCCTTGTATTGTGGCTACAATTACAGTCATGAAGGAAACCTATTCCTCAATGCTTCTTGTCCAATCGAAAAGCCAAATGTAGGAATCTTTAACTTTGGAATATTCCTTCAAGCCCTTCAATCTGATATTGGGGAATCACACTTTCCCAAGAAGTTTCTTCACTGCTTTTGGTGGGGCTTAAGGAATCTAAGCGCTTTGGGTCAAAATCTCACTACAAGTACTTGCAATTGGGAAAACTGCTTTGCCATTTTGATTTGCATCTCTGGCCTAGTGTTGTTTGCGTCTCTCCTTGGCAACCTGCAGATGTGTTGGCGATCCACAAACACAAGGGTGGAGGAGATGAGAGTGAGAAGGAGAGATGTTGAACAATGGATGTCGCATCGTTTACTCCCTGAGAATATGAGGGAGCGGGTTCGAAGGTATGAACATTACATGTGGCAGGATACCAGAGGCGCTGATGAACATAATCTGCTGCATAATCTGCCTAAAGACCTCCATAGAGATATTAAGCGCCATCTTTGCTTGGTTTTGCTTATGCGAGTTCCGATGTTTGAAAAGATGGATGACCAATTGTTGGATGCAATGTGTGCACGTCTAAAGCCCGTGTTGTACACAGAAGAAAGCTGCATTGTTCGGGAAGGCGATCCAGTCGATGAGATGCTCTTCATCATGCGAGGCAAGCTCTTAACCATGACTACAAATGGAGGGAGAACTGGTTTCTTCAACTCTGATTTCCTCATGGCTGGTGATTTCTGTGGAGAAGAGTTACTGACTTGGGGTCTAGACCCTCACTCCTCAACCAATCTCCCCATTTCAACTCGAACCGTTCGGTCGCTCACAGAAGTCGAAGCATTTGCCTTTAAACCCGACGACTTGAAAATTGTAGCCACTCAATACCGTAGGCTTCACAGCAAGCAGCTGCGCCAGATTTTCAGATTTTACTCACAGCAATGGAGAACCTGGGCAGCTTGTTTCTTACAAGCAGCATGGAGGTGGCATCAAAGAAAGAAGCTCAGGGAGTGTGTGAAGGAAGAAGAGAGTAGGTTGAAAGTCGTACTGGCTTCCATCGACGAGCGGTCACCGAGTTTAGGCGCCACCATTTATGCATCTAGATTTGCAGCCAACATGCTTCGGGCGAGGAGACGAAACAGTTCTAGGAAAGCTAGGATGTCCATGCTGCTTCAGAAGCCAGCAGAGCCTGATTTTACCTTGGAAGACAATAACTCTTAA 2037 43.74 MNSALHRGLASSSHGSRGIEKSLKSPSCNNLMPEGLRSGKRILDPQGPFLQSWNKIFVLSCVVAVSLDPLFFYVPVIDNRNKCLRLDEKVETVACILRLFTDLFYVVHIVFQFRTGFIAPSSRVFGRGVLIEDSWAIAMRYLSSYFLIDIFSVLPLPQVRNVSWDTRVMILINIHKIRGLRSWNTENLLKLAVLCQFVPRFLRIYPLYKEVTRTSGILIETAWAGAAFNLFLYMLASHVFGSIWYLCSVEREAQCWHDACSKHPGCNLTSLYCGYNYSHEGNLFLNASCPIEKPNVGIFNFGIFLQALQSDIGESHFPKKFLHCFWWGLRNLSALGQNLTTSTCNWENCFAILICISGLVLFASLLGNLQMCWRSTNTRVEEMRVRRRDVEQWMSHRLLPENMRERVRRYEHYMWQDTRGADEHNLLHNLPKDLHRDIKRHLCLVLLMRVPMFEKMDDQLLDAMCARLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSDFLMAGDFCGEELLTWGLDPHSSTNLPISTRTVRSLTEVEAFAFKPDDLKIVATQYRRLHSKQLRQIFRFYSQQWRTWAACFLQAAWRWHQRKKLRECVKEEESRLKVVLASIDERSPSLGATIYASRFAANMLRARRRNSSRKARMSMLLQKPAEPDFTLEDNNS 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 226294 229945 - Cp4.1LG09g00470.1 Cpe09g00037 474403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00037 678 CDD CAP_ED 452 571 IPR000595 -
Cpe09g00037 678 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 4 673 - -
Cpe09g00037 678 MobiDBLite consensus disorder prediction 1 30 - -
Cpe09g00037 678 Gene3D Helix hairpin bin 375 443 - -
Cpe09g00037 678 SUPERFAMILY cAMP-binding domain-like 381 577 IPR018490 -
Cpe09g00037 678 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 673 - -
Cpe09g00037 678 SUPERFAMILY Voltage-gated potassium channels 44 372 - -
Cpe09g00037 678 Pfam Ion transport protein 51 376 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe09g00037 678 ProSiteProfiles cAMP/cGMP binding motif profile. 452 536 IPR000595 -
Cpe09g00037 678 Gene3D - 56 373 - -
Cpe09g00037 678 Gene3D Jelly Rolls 450 570 IPR014710 -
Cpe09g00037 678 SMART cnmp_10 452 583 IPR000595 -
Cpe09g00037 678 Pfam Cyclic nucleotide-binding domain 473 563 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00607 Cpe-Chr5:3693807 Cpe09g00037 Cpe-Chr9:226294 0 dispersed
Cpe09g00037 Cpe-Chr9:226294 Cpe16g00526 Cpe-Chr16:6198876 0 dispersed
Cpe09g00035 Cpe-Chr9:216208 Cpe09g00037 Cpe-Chr9:226294 6.34E-37 proximal
Cpe08g00589 Cpe-Chr8:3888601 Cpe09g00037 Cpe-Chr9:226294 1.58E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00037 K05391 - csv:101214911 1025.39