Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00038 ATGATGATGGTTGATACGGGTGCATCAGAAAATCGCAGGCCGATTGTTGATAAGCATCCAGAGAAAAATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTATCAGGGGGAAGAGGGCAACCATGGAAGATTTCTTCGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTTTGCCTTTTTGGCATCTTTGATGGCCATGGTGGATCTCGTGCCGCAGAGTTTTTGAAAGACCATCTCTTCGAGAATCTGATGAAGCACCCAAATTTTTTGATGGATACCAAAGTAGCTATCAGTGAAACATATCAACGGACCGATGCTGAATTTTTAAGTTTGGAAAAAGAAACTTTAAGGGACGATGGCTCCACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGCGATTCGCGTGCTATAATATCAAAAGGAGGTGAAGCAATCCCTCTTTCTGAGGACCACAAACCAAATAGAACTGACGAGCGGCGGAGAATTGAAAAGGCCGGTGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGTGTGTTAGCAATGTCCCGCGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTTGCAGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACGTCGAGTTGCTTATTCTCGCAAGCGATGGTCTTTGGGATGTGGTTCGCAACGAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCTGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCATGATGATGCAGGTCCTGCTGCCGAAACTCGAGAAATCGACTAA 909 45.98 MMMVDTGASENRRPIVDKHPEKNEDGGYASGGWKSDDGKLSWGYSSIRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPNFLMDTKVAISETYQRTDAEFLSLEKETLRDDGSTASTALLVGNHLYVANVGDSRAIISKGGEAIPLSEDHKPNRTDERRRIEKAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDVELLILASDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHDDAGPAAETREID 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 231284 235285 + Cp4.1LG09g00340.1 Cpe09g00038 474404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00038 302 CDD PP2Cc 43 287 IPR001932 -
Cpe09g00038 302 ProSiteProfiles PPM-type phosphatase domain profile. 41 287 IPR001932 -
Cpe09g00038 302 MobiDBLite consensus disorder prediction 11 25 - -
Cpe09g00038 302 MobiDBLite consensus disorder prediction 1 31 - -
Cpe09g00038 302 Gene3D - 33 292 IPR036457 -
Cpe09g00038 302 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Cpe09g00038 302 PANTHER ALPHABET, ISOFORM E-RELATED 11 296 - -
Cpe09g00038 302 SMART PP2C_SIG_2 39 287 IPR001932 -
Cpe09g00038 302 SMART PP2C_4 31 285 IPR001932 -
Cpe09g00038 302 Pfam Protein phosphatase 2C 45 280 IPR001932 -
Cpe09g00038 302 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 11 296 - -
Cpe09g00038 302 SUPERFAMILY PP2C-like 39 288 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00038 Cpe14g00030 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00310 Cpe-Chr2:1640017 Cpe09g00038 Cpe-Chr9:231284 1.50E-121 dispersed
Cpe06g00276 Cpe-Chr6:1521860 Cpe09g00038 Cpe-Chr9:231284 5.38E-120 dispersed
Cpe06g00680 Cpe-Chr6:4218014 Cpe09g00038 Cpe-Chr9:231284 6.24E-54 dispersed
Cpe09g00038 Cpe-Chr9:231284 Cpe14g00210 Cpe-Chr14:1175110 2.41E-59 dispersed
Cpe12g00778 Cpe-Chr12:7048385 Cpe09g00038 Cpe-Chr9:231284 7.98E-22 dispersed
Cpe17g00635 Cpe-Chr17:5186043 Cpe09g00038 Cpe-Chr9:231284 1.31E-38 dispersed
Cpe14g00052 Cpe-Chr14:290547 Cpe09g00038 Cpe-Chr9:231284 2.13E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00038 K17506 - csv:101203681 565.844