Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00038 | ATGATGATGGTTGATACGGGTGCATCAGAAAATCGCAGGCCGATTGTTGATAAGCATCCAGAGAAAAATGAAGATGGTGGCTATGCCAGTGGAGGGTGGAAAAGTGACGATGGGAAACTTAGTTGGGGGTATTCAAGTATCAGGGGGAAGAGGGCAACCATGGAAGATTTCTTCGATATTAAAATGTCGAAGGTTGATGGTCAAACGGTTTGCCTTTTTGGCATCTTTGATGGCCATGGTGGATCTCGTGCCGCAGAGTTTTTGAAAGACCATCTCTTCGAGAATCTGATGAAGCACCCAAATTTTTTGATGGATACCAAAGTAGCTATCAGTGAAACATATCAACGGACCGATGCTGAATTTTTAAGTTTGGAAAAAGAAACTTTAAGGGACGATGGCTCCACTGCTTCAACAGCTTTGCTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGCGATTCGCGTGCTATAATATCAAAAGGAGGTGAAGCAATCCCTCTTTCTGAGGACCACAAACCAAATAGAACTGACGAGCGGCGGAGAATTGAAAAGGCCGGTGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGTGTGTTAGCAATGTCCCGCGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTTGCAGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACGTCGAGTTGCTTATTCTCGCAAGCGATGGTCTTTGGGATGTGGTTCGCAACGAGGATGCAGTACTAGTTGCAGGGAAGGAAGAAGAACCTGAGGCAGCTGCTCGGAAGCTAACCGAAGCAGCATTTACCCGTGGTAGCGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCATGATGATGCAGGTCCTGCTGCCGAAACTCGAGAAATCGACTAA | 909 | 45.98 | MMMVDTGASENRRPIVDKHPEKNEDGGYASGGWKSDDGKLSWGYSSIRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPNFLMDTKVAISETYQRTDAEFLSLEKETLRDDGSTASTALLVGNHLYVANVGDSRAIISKGGEAIPLSEDHKPNRTDERRRIEKAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDVELLILASDGLWDVVRNEDAVLVAGKEEEPEAAARKLTEAAFTRGSADNITCIVVKFHHDDAGPAAETREID | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 231284 | 235285 | + | Cp4.1LG09g00340.1 | Cpe09g00038 | 474404 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00038 | 302 | CDD | PP2Cc | 43 | 287 | IPR001932 | - | |
Cpe09g00038 | 302 | ProSiteProfiles | PPM-type phosphatase domain profile. | 41 | 287 | IPR001932 | - | |
Cpe09g00038 | 302 | MobiDBLite | consensus disorder prediction | 11 | 25 | - | - | |
Cpe09g00038 | 302 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Cpe09g00038 | 302 | Gene3D | - | 33 | 292 | IPR036457 | - | |
Cpe09g00038 | 302 | ProSitePatterns | PPM-type phosphatase domain signature. | 72 | 80 | IPR000222 | GO:0043169 | |
Cpe09g00038 | 302 | PANTHER | ALPHABET, ISOFORM E-RELATED | 11 | 296 | - | - | |
Cpe09g00038 | 302 | SMART | PP2C_SIG_2 | 39 | 287 | IPR001932 | - | |
Cpe09g00038 | 302 | SMART | PP2C_4 | 31 | 285 | IPR001932 | - | |
Cpe09g00038 | 302 | Pfam | Protein phosphatase 2C | 45 | 280 | IPR001932 | - | |
Cpe09g00038 | 302 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 11 | 296 | - | - | |
Cpe09g00038 | 302 | SUPERFAMILY | PP2C-like | 39 | 288 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe09g00038 | Cpe14g00030 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00310 | Cpe-Chr2:1640017 | Cpe09g00038 | Cpe-Chr9:231284 | 1.50E-121 | dispersed | |
Cpe06g00276 | Cpe-Chr6:1521860 | Cpe09g00038 | Cpe-Chr9:231284 | 5.38E-120 | dispersed | |
Cpe06g00680 | Cpe-Chr6:4218014 | Cpe09g00038 | Cpe-Chr9:231284 | 6.24E-54 | dispersed | |
Cpe09g00038 | Cpe-Chr9:231284 | Cpe14g00210 | Cpe-Chr14:1175110 | 2.41E-59 | dispersed | |
Cpe12g00778 | Cpe-Chr12:7048385 | Cpe09g00038 | Cpe-Chr9:231284 | 7.98E-22 | dispersed | |
Cpe17g00635 | Cpe-Chr17:5186043 | Cpe09g00038 | Cpe-Chr9:231284 | 1.31E-38 | dispersed | |
Cpe14g00052 | Cpe-Chr14:290547 | Cpe09g00038 | Cpe-Chr9:231284 | 2.13E-158 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00038 | K17506 | - | csv:101203681 | 565.844 |