Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00079 ATGCCTTCGTGGTGGGGGAAGCCATCATCCAAAGAAGTAAAGAAGAAAACAAGCAAGGAAAGTTTCATTGACTCATTACACCGTAAGTTCAAGAATTCACCTGAAGGTAAAGTAAACAGCCGATCAGGAAGTTCTTGTAGACGTGGTGGTGACACTATATCTGAGAAATCACCTCTATCAAGATCACCATCACCTTCCAAAGAAGTATCTAGATGTCAAAGTTTTGCTGAAAGATTACATTCTCACCAACTGCCACTTCCAGAAGTGCACCCTACAGGTATAGGTCCCACAGACTCTGGGATTAGTGTGACGGCAAAATCAAAATTAGAGAGAAGCTCTAAGACATCTTCATTTCTACCACTCCCTAGACCTGCATGTATCCGGAGGAGGCCAGATCCTGCAGATTTGGATGGAGATTTAGTCACTGGTTCAGTCTCTGGTGAGTCCTCAAGTGATAGTGATGATCCCATTGATTCACGTCAACGTAGTCCTCAGGCAACTGACTATGACGTTGGGACTAGAACTGTGGTAGGTTCTATTGAACCTAGTGCAACTCTCAAGGACCAGTCTTCTACTGTTGTGCAAACAAATTCAAAAGAGGGCAAGAAAGCGGAAAGTCTTTCATTTCCTCATAAGAAGCCTTCAATACCTAAACGGAGGCCTTTAAGCAGCAATGTAACAAATCTGCAAGTTCCTCGTCATGGGGCATTCTTTAGCGCTCCAGATAGTTCCATGTCTAGTCCTTCTAGAAGTCCTATGAGGGTATTTAGCACTGAGCAAGTCATGAACACTGCTGTTTGGTCTGGAAAGTCTCACTCAGATGTCATTTTAGGTGGCTCTGGCCACTGCTCCAGTCCTGGTTCTGGACACAATTCAGGGCACAACTCTATGGGAGGTGATATGGCAGCCCACTTCTTTTGGCAACAAAGTAGGGGCAGCCCCGAATATTCTCCAGTACCTAGTTCAAGAATGACTAGTCCCGGCCCAAGCTCCAGAATTCAAAGTGGTGCTGTTACACCTATTCATCCTAGAGCAGGAGCTCTGCCTGCTGAATCACAAACTTGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCTCTTCCTCCCATTGCAATCTCGAACTCTTCTCCATTTTCTCATTCAAACTCTGCAGTGACATCTCCTTCAGTGCCTAGGAGTCCTGGAAGGACAGAGACTCCAGCAAGCCCAGGTTCACGCTGGAAAAAGGGGAAGCTACTGGGTCGTGGTACATTTGGGCATGTGTACGTTGGTTTTAATAGCGAAAGTGGAGAAATGTGTGCAATGAAGGAGGTCACCTTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCTAAACAATTAATGCAGGAAATTGCTTTACTGAGTCGTTTACGGCATCCCAACATTGTGCAATATTATGGTTCAGAATCAGTGGGTGATAAACTCTATATTTATCTGGAATATGTATCTGGTGGCTCCATTTATAAATTACTACAAGAGTATGGACAATTTGGGGAACTAGCAATTCGTAGCTATACTCAACAAATACTATCAGGACTTGCATATTTGCATGCTAAAACTACAGTGCACAGGGACATTAAAGGAGCAAACATACTTGTTGACCCTAATGGCCGTGTTAAATTGGCAGACTTTGGGATGGCGAAGCATATCACAGGCCAATCATGTCCACTGTCGTTTAAGGGCAGCCCTTACTGGATGGCACCTGAGGTCATAAAGAACTCAAATGGTTGCAACCTTGCCGTTGATATTTGGAGTCTTGGATGCACTGTTCTGGAGATGGCAACTACAAAGCCACCTTGGAGCCAGTATGAAGGGGTTGCTGCGATGTTTAAGATTGGCAATAGCAAAGAGCTCCCAGTAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTTGTGAGACTATGTCTGCAACGGAACCCGTATCATCGACCTACAGCTGCTCGACTTTTGGATCATCCTTTTGTCAAATATGCTGCACCTGTAGAGAGGCCTTTTTTGAGCTCTGAACCCGATGCAACTCCTGGGGTTACAAACGGAGTGAAGACTTTGGGTATTGGCCAATCACGTATTACTTCTGTGGACTCGGATAGTAGACTCGCAGTTCATTCTTCAAGAGTCTCAAAACCTGTTCTTCATGCCAGTGACATCAACATTCTCAGAAACATCTCATGTCCTGTTTCACCAATTGGAAGCCCTCTTTTGCGCTCACGATCACCTCAACATCCCAGTGGTAGAATGTCTCCTTCACCCATATCAAGTCCAAGAACTACTTCAGGCTCGTCGACACCTTTGACAGCATGTGGTGGTGCTATTCCTTATAACCACCTGAAACAAGCTATGTACTTGCAAGAGGGATTTGGAAGCATGCCGAAGTCCTTAAATAATAGTCCATACAGCAGTGGTCTCTCGTTCCATGATTCAAATCCCGATATTTTTCGAGGGTTGCAGCCTGGGGCTCCCATCTTCTCTGAAATGATACCAGAAAATGATATCCTGGGCAAACAGGTTGGAGTCGGAAGACCTGCTTATGGTGAACTGTATGATGGACAGCAGGTCTTGGCTGATCGAGTGTCTCGACAGCTCCTGAGGGATCATGTTAAAACAAACCCTTCTCTTGATTTGAGTCCTAGCACTACCTTGTCTGGCCGCATGAATGGTATCTAA 2688 45.09 MPSWWGKPSSKEVKKKTSKESFIDSLHRKFKNSPEGKVNSRSGSSCRRGGDTISEKSPLSRSPSPSKEVSRCQSFAERLHSHQLPLPEVHPTGIGPTDSGISVTAKSKLERSSKTSSFLPLPRPACIRRRPDPADLDGDLVTGSVSGESSSDSDDPIDSRQRSPQATDYDVGTRTVVGSIEPSATLKDQSSTVVQTNSKEGKKAESLSFPHKKPSIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRVFSTEQVMNTAVWSGKSHSDVILGGSGHCSSPGSGHNSGHNSMGGDMAAHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGALPAESQTCWPDEKQTHRLPLPPIAISNSSPFSHSNSAVTSPSVPRSPGRTETPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSESVGDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRSYTQQILSGLAYLHAKTTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVIPEHLSDDGKDFVRLCLQRNPYHRPTAARLLDHPFVKYAAPVERPFLSSEPDATPGVTNGVKTLGIGQSRITSVDSDSRLAVHSSRVSKPVLHASDINILRNISCPVSPIGSPLLRSRSPQHPSGRMSPSPISSPRTTSGSSTPLTACGGAIPYNHLKQAMYLQEGFGSMPKSLNNSPYSSGLSFHDSNPDIFRGLQPGAPIFSEMIPENDILGKQVGVGRPAYGELYDGQQVLADRVSRQLLRDHVKTNPSLDLSPSTTLSGRMNGI 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 464681 474929 + Cp4.1LG09g00700.1 Cpe09g00079 474445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00079 895 SUPERFAMILY Protein kinase-like (PK-like) 405 664 IPR011009 -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 368 400 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 1 225 - -
Cpe09g00079 895 SMART serkin_6 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00079 895 MobiDBLite consensus disorder prediction 311 337 - -
Cpe09g00079 895 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 810 - -
Cpe09g00079 895 CDD STKc_MEKK1_plant 406 663 - -
Cpe09g00079 895 Gene3D Transferase(Phosphotransferase) domain 1 405 679 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 360 409 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 738 773 - -
Cpe09g00079 895 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 810 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 162 203 - -
Cpe09g00079 895 Pfam Protein kinase domain 408 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00079 895 MobiDBLite consensus disorder prediction 97 119 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 876 895 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 741 773 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 9 35 - -
Cpe09g00079 895 ProSiteProfiles Protein kinase domain profile. 407 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00079 895 MobiDBLite consensus disorder prediction 36 71 - -
Cpe09g00079 895 MobiDBLite consensus disorder prediction 878 895 - -
Cpe09g00079 895 ProSitePatterns Protein kinases ATP-binding region signature. 413 436 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00079 Cpe14g00100 CCT
Cpe09g00079 Cpe14g00100 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00458 Cpe-Chr7:2927007 Cpe09g00079 Cpe-Chr9:464681 5.81E-108 dispersed
Cpe09g00079 Cpe-Chr9:464681 Cpe10g00335 Cpe-Chr10:1945120 8.27E-137 dispersed
Cpe13g00588 Cpe-Chr13:5763777 Cpe09g00079 Cpe-Chr9:464681 5.63E-62 dispersed
Cpe14g00100 Cpe-Chr14:541122 Cpe09g00079 Cpe-Chr9:464681 0 wgd
Cpe05g00647 Cpe-Chr5:3949716 Cpe09g00079 Cpe-Chr9:464681 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62582 PF00069 Pkinase 3.20E-70 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00079 K20717 - csv:101214961 1510.35