Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00087 ATGGTGGTAATTAGTCTCTCCATTGGGTTAATTACATGGGTTTTAGTTATGGTTTTGTTCTTGAAAGTGGTGGTTTCATGGTGGGTTTTGCCTGTTTTGGCTCTTCAAAAGTTGAAGCGTAATGGGTTTCGAGGTCCTCCTCCAAGCTTTCCTCTTGGAAACATTGCTGAGATGAAGAGGATAAGGAAAGCTTCCGCCGCCATTAATGGCGATCCCCATTCCTTCCCTTCTTCCAAGGTCTCCCATGATATTCACTCCACTGTTTTCCCTCACTTCGCTCAATGGCAGGCCTCTTATGGGAAGAAGTTTATATATTGGTTGGGGACAGAGCCATTTTTATACATTGCAGACCCACACTTTATGAAGAAGATATCTGAAGCTGTGATGGCAAAGGGTTGGGGGAAGCCAGCCGTGTTCCGAAACGATAGGAGACCGATGTTCGGCGATGGCCTTGTCATGACCGAAGGCGACGACTGGGTTCGCCATCGACACATTCTCACTCCCGCTTTCAACCCCGCCAACTTGAAGGCAATGACAAAGTTTATGGTGGAGTCCACCACTAAAATGCTAAACAAGTGGAGCAGCCTCGTAAACTCCGCCGGTGGCGAAATCGACGTGGAGAGAGGAATCACGGCCACCGCCGGCGACATTATCGCAAAGGCCAGTTTCGGAATTTGCAACGATGGCGGCCGAGACGCCTTCGACTACCTCAGAGCTCTTCAGTTCACTCTCTTCCAAAACAGCACTTACGTGGGCGTTCCTTTCAGCAGCCTTTTTTTCTGCCCGGGCCGAACCCTAAGCGCCAAGCGGCTTGGCGCTGCAATTGACCGCCTCTTTTTATCCTTAGTGTCGAAGAGGAAACTGTCGCAGGATTCCTCCTCTGATTTGCTCAGCCGCTTGATTGAGGGTGAGAAGAGCACCGGCGACGGCGGAAAGATGGGGCTGACGACAAGAGAATTGGTGGACGAGTGCAAGACTTTCTTCTTTGGCGGCCATGAGACGACGGCGCTGGCGACTAGTTGGACACTCCTGCTTCTGGCAACGCGGCCGGAGTGGCAAGATATTTTACGAGAGGAAATCAAAGAGGTTATTGGAGATAAGGAAATTGATTTCAACATGCTTTCTGGACTCAAAAAGATGGGATGCGTATTCAGTGAAGTACTTAGGCTATACCCATCAGCTCCTAACATACAAAGACAAGCAAAAGGAGACATTGATGTTGGGAGCATGACCATCCCAAAAGGGACCAACATATGGATAGACATCGTCGCAATGCATCGCGACCCGGATCTATGGGGCGACGACGCGAATGAGTTCAAGCCAGAGCGGTTCGTGGAGGACAGCATTCGTGGCGGGTGCAACCACAAGATGGGATATTTGCCATTTGGATTTGGTGGGAGAATGTGCATTGGTAAGAACTTGTCCTCTATGGAGTATAAGATTGTGTTAACGCTAATTCTCTCTAGGTTTTCACTCTCTCTGTCTCCTAATTATTCTCATTCTCCTGCAACTTTGCTCTCTTTAAGACCTGCCCATGGCCTTCCTCTCATTGTAACCCCCCTTCACCCTTAA 1572 49.3 MVVISLSIGLITWVLVMVLFLKVVVSWWVLPVLALQKLKRNGFRGPPPSFPLGNIAEMKRIRKASAAINGDPHSFPSSKVSHDIHSTVFPHFAQWQASYGKKFIYWLGTEPFLYIADPHFMKKISEAVMAKGWGKPAVFRNDRRPMFGDGLVMTEGDDWVRHRHILTPAFNPANLKAMTKFMVESTTKMLNKWSSLVNSAGGEIDVERGITATAGDIIAKASFGICNDGGRDAFDYLRALQFTLFQNSTYVGVPFSSLFFCPGRTLSAKRLGAAIDRLFLSLVSKRKLSQDSSSDLLSRLIEGEKSTGDGGKMGLTTRELVDECKTFFFGGHETTALATSWTLLLLATRPEWQDILREEIKEVIGDKEIDFNMLSGLKKMGCVFSEVLRLYPSAPNIQRQAKGDIDVGSMTIPKGTNIWIDIVAMHRDPDLWGDDANEFKPERFVEDSIRGGCNHKMGYLPFGFGGRMCIGKNLSSMEYKIVLTLILSRFSLSLSPNYSHSPATLLSLRPAHGLPLIVTPLHP 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 507970 510771 - Cp4.1LG09g00930.1 Cpe09g00087 474453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00087 523 Gene3D Cytochrome P450 31 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 Pfam Cytochrome P450 89 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Cpe09g00087 523 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 SUPERFAMILY Cytochrome P450 75 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe09g00087 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 517 - -
Cpe09g00087 523 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 12 517 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00650 Cpe09g00087 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01083 Cpe-Chr7:9593696 Cpe09g00087 Cpe-Chr9:507970 2.20E-82 dispersed
Cpe09g00087 Cpe-Chr9:507970 Cpe13g01023 Cpe-Chr13:8427343 1.54E-91 dispersed
Cpe01g00550 Cpe-Chr1:3162198 Cpe09g00087 Cpe-Chr9:507970 4.40E-36 transposed
Cpe12g00070 Cpe-Chr12:412051 Cpe09g00087 Cpe-Chr9:507970 6.17E-89 transposed
Cpe05g00650 Cpe-Chr5:3968437 Cpe09g00087 Cpe-Chr9:507970 7.01E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00087 - - csv:101220942 766.918