Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00101 ATGGTATTTCATATGGGTATGGAGCTGAAACGCCTCTTTCTCATTTTCTTCTTCTCCTTCGAGCTCTGTATTTTGACCTCCAATGGCGTTTCTGACCACAATCAGATTCTTCTCGACAGAGAAAGCTTGCTTTCTTTCAAAGCATTGCTAGACACCTCAAAAACCCTGCCATGGAACTCATTGGTCCCTCACTGCTTCTGGGTCGGAGTTTCTTGCCGATTCCGTCGAGTTACAGAGCTCTCCCTTTCATCTCGTTCCCTTAAAGGCCGACTCTCTCCTTCCCTTTTCAATATCTCGAGCCTCTCTGTTCTTGACCTTTCAAACAATGGCCTCTATGGCTCAATCCCACCTCAGATATCCAATCTTCGGAGCTTGAAGGTGCTCGCTCTCGACGGAAATCAGTTTTCCGGCGACTTCCCTATCGGAGTTACTGAGTTGACCCAGATGGAGAATCTCAAGTTGGGGACTAATTTGTTTACAGGGACAATCCCGCTGGAGCTTGGAAATTTAAAGCAACTACGGACGCTTGACCTTTCCGGCAATGCCTTCGTCGGAAATGTTCCGACCCATATCGGAAATTTGACGAGAATCTTATCGTTGGACCTTGGCAACAATCTTTTATCAGGTTCACTCCCATTAACCATCTTTACTGAGCTTAAATCCTTAACTTCTTTGGACATTTCCAACAACTCGTTTTCTGGTTCAATCCCACCTGAAATTGGTAATCTACAGCATTTGACTGACCTTTACATCGGCATTAACCACTTTTCCGGCGAGTTGCCGCCTGAATTTGGTGATCTTGTGTTGCTAGAGAACTTTTTCGCTCCTTCTTGTTCTTTAACCGGTCCATTGCCCGAAGAACTATCCAAGTTGAAATCATTGAGTAAACTGGACCTTTCATACAACCCACTTGAATGTTCTATCCCAAAATCGATCGGTGAGTTACAGAACTTGACCATATTGAATCTGGTTTACACTGACATTAATGGTTCCATTCCTGCTGAACTTGGAAACTGCAAAAACTTGAAAACATTGATGCTTTCATTCAACTCTCTATCTGGGATGTTGCCACAAGAGCTTTCAGAGCTTCCCATCTTGACATTTTCTGCAGAGAAGAATCAGCTTTCTGGGCCATTGCCTTCTTGGCTTGGCAAATGGGATCGTGTTGAATCGATCTTACTGTCGAGTAATCGGTTTACCGGAGAAATCCCACCTGAGATTGGGAATTGCTCAATGCTTAATCACCTCAGTTTGAGAAATAACATGTTAACAGGTTCAATACCTAAAGAGATTTGTAATGCTGCATCCTTGATGGAGATTGATCTTGATAGTAATTTCCTTTCGGGTTCGATCGACGACACATTCGTGCTGTGTAGAAACCTTACACAGTTGGTTTTGGTAGACAATCTGATTGTTGGTAGAATACCTGAGTACTTCTCAGACCTTCCCTTACTCGTAATCAACCTCGACTCGAATAATTTCACCGGTTCGTTACCGAGAAGTATATGGAACTCGGTGAATTTGATGGAGTTTTCTGCTGCAAATAACCAATTGGAGGGTCATCTGCCTTCAGAGATTGGTTATGCAGCTTCACTTCAGAGGCTTGTTCTTAGCAACAATAGGTTGACAGGCACAATACCGAATGAGATTGGAAATCTCACAGCCCTTTCTGTTCTAAACTTGAATTCAAATCTGCTTGAAGGAACTATTCCAGCCATGCTTGGAGATTGTAAAGCTCTTACCACATTGGACCTCGGAAACAACGGTCTAAATGGGTCGATACCGGAAGAACTTGCTGAGCTTGCTGAATTACAGTGCCTTGTTCTTTCGCACAATGAGTTATCTGGAGCAATACCTTCCAAGACATCTGCTTATTTTCAACAAGTGACTATTCCTGATTTGAGCTTTGTTCAACATCATGGCGTTTTTGATTTGTCCCATAATAGATTGTCGGGTAGCATACCTGATGAACTAGGGGAGTGTGTTGTCGTGGTGGATCTTTTACTGAACAATAATCTACTTTCTGGAGAGATTCCTAAATCTCTTTCTCTCTTAACAAACCTGACAACCTTGGATTTGTCTGGCAATATGCTTACCGGTCCTATTCCCGCAGAGCTCGGTGATGTTCTTAAGCTGCAAGGCCTGTATCTTGGGAATAATCGCCTCACCGGATCGATCCCGGTAAGCTTGAGTCGTTTGAGTAGCTTGGTGAAGTTGAACTTAACTGGTAATAGACTATCTGGTTCAGTTCCAGAAACTCTTGGTGATCTGAAAGCTCTAACTCATTTGGATCTAAGTTCTAATGAGTTGGATGGTGATCTTCCTTTGTCTCTATCCAACGTGTTGAATCTTGTGGGGCTTTATGTACAAGAGAACAGGCTTTCTGGACAGATTGTAGAGCTTTTCCCAAGCTCATTTACATGGAAGATTGAAGCTTTGAATTTGAGTCAGAAAATATGCAGCCTGTTCAATATGTTCTACCTGAATTTGGCGAAAAACAGTCTCGAAGGACCGATCCCGAAAAGCGGCATTTGCCAGAATCTATCCAAAAGTTCATTTGTTGGGAACAAGAATCTTTGTGGAAGAATCATGGGTTACAACTGCAAGATCAAAAACATGGAAAGATCTGCAGTCTTGAATGCTTGGAGTGTTGCTGGGATTATCATTGTTAGTGTTCTTATCGTTTTTTCCGTGGCGTTTGCTATGCGAAAACGGATTATTCGAAGCCATAGAGATGATGATCCAGAGGATATGGAGGAAAGCAAACTAAACAGTTTGATGGATCCCAATCTCTATTTCTTAAGCAGCAGTAGATCGAAAGAGCCGTTAAGCATCAACGTGGCGATGTTCGAGCAGCCGCTTCTGAAGCTAACTTTGGTTGATATCCTTGAAGCAACCAATAACTTCTGTAAAACAAACATCATTGGAGATGGAGGATTTGGGACAGTGTACAAGGCCACCTTGCCTGATGGGAAAATTGTTGCTGTCAAGAAGCTAAGCCAAGCAAAAACACAGGGGCACAGGGAATTCATGGCTGAAATGGAAACCATAGGCAAAATTGCTTGCGTTTGTCTGTCTGAAAATCCTGCTAACAGACCTTCCATGCTTCAGGTATTCAAGTTTCTTAAAGGGATCAAATTACAGTAA 3147 42.74 MVFHMGMELKRLFLIFFFSFELCILTSNGVSDHNQILLDRESLLSFKALLDTSKTLPWNSLVPHCFWVGVSCRFRRVTELSLSSRSLKGRLSPSLFNISSLSVLDLSNNGLYGSIPPQISNLRSLKVLALDGNQFSGDFPIGVTELTQMENLKLGTNLFTGTIPLELGNLKQLRTLDLSGNAFVGNVPTHIGNLTRILSLDLGNNLLSGSLPLTIFTELKSLTSLDISNNSFSGSIPPEIGNLQHLTDLYIGINHFSGELPPEFGDLVLLENFFAPSCSLTGPLPEELSKLKSLSKLDLSYNPLECSIPKSIGELQNLTILNLVYTDINGSIPAELGNCKNLKTLMLSFNSLSGMLPQELSELPILTFSAEKNQLSGPLPSWLGKWDRVESILLSSNRFTGEIPPEIGNCSMLNHLSLRNNMLTGSIPKEICNAASLMEIDLDSNFLSGSIDDTFVLCRNLTQLVLVDNLIVGRIPEYFSDLPLLVINLDSNNFTGSLPRSIWNSVNLMEFSAANNQLEGHLPSEIGYAASLQRLVLSNNRLTGTIPNEIGNLTALSVLNLNSNLLEGTIPAMLGDCKALTTLDLGNNGLNGSIPEELAELAELQCLVLSHNELSGAIPSKTSAYFQQVTIPDLSFVQHHGVFDLSHNRLSGSIPDELGECVVVVDLLLNNNLLSGEIPKSLSLLTNLTTLDLSGNMLTGPIPAELGDVLKLQGLYLGNNRLTGSIPVSLSRLSSLVKLNLTGNRLSGSVPETLGDLKALTHLDLSSNELDGDLPLSLSNVLNLVGLYVQENRLSGQIVELFPSSFTWKIEALNLSQKICSLFNMFYLNLAKNSLEGPIPKSGICQNLSKSSFVGNKNLCGRIMGYNCKIKNMERSAVLNAWSVAGIIIVSVLIVFSVAFAMRKRIIRSHRDDDPEDMEESKLNSLMDPNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATNNFCKTNIIGDGGFGTVYKATLPDGKIVAVKKLSQAKTQGHREFMAEMETIGKIACVCLSENPANRPSMLQVFKFLKGIKLQ 1048
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 560966 564880 - Cp4.1LG09g00950.1 Cpe09g00101 474467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00101 1048 SUPERFAMILY L domain-like 631 861 - -
Cpe09g00101 1048 SMART LRR_typ_2 98 122 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 733 756 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 339 363 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 601 625 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 757 781 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 170 193 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 685 709 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 219 243 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 553 577 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 291 315 IPR003591 -
Cpe09g00101 1048 SMART LRR_typ_2 194 218 IPR003591 -
Cpe09g00101 1048 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 908 1020 - -
Cpe09g00101 1048 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 77 140 - -
Cpe09g00101 1048 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1022 1046 - -
Cpe09g00101 1048 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 908 1020 - -
Cpe09g00101 1048 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1022 1046 - -
Cpe09g00101 1048 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 455 793 - -
Cpe09g00101 1048 Gene3D Ribonuclease Inhibitor 518 627 IPR032675 -
Cpe09g00101 1048 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 370 452 - -
Cpe09g00101 1048 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 139 347 - -
Cpe09g00101 1048 Gene3D Ribonuclease Inhibitor 216 367 IPR032675 -
Cpe09g00101 1048 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 139 347 - -
Cpe09g00101 1048 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 455 793 - -
Cpe09g00101 1048 Gene3D Ribonuclease Inhibitor 628 876 IPR032675 -
Cpe09g00101 1048 SUPERFAMILY Protein kinase-like (PK-like) 950 1018 IPR011009 -
Cpe09g00101 1048 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 77 140 - -
Cpe09g00101 1048 Gene3D Phosphorylase Kinase; domain 1 932 1025 - -
Cpe09g00101 1048 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 370 452 - -
Cpe09g00101 1048 SMART LRR_sd22_2 291 317 - -
Cpe09g00101 1048 SMART LRR_sd22_2 709 730 - -
Cpe09g00101 1048 SMART LRR_sd22_2 757 783 - -
Cpe09g00101 1048 SMART LRR_sd22_2 219 245 - -
Cpe09g00101 1048 SMART LRR_sd22_2 685 706 - -
Cpe09g00101 1048 SMART LRR_sd22_2 170 196 - -
Cpe09g00101 1048 SMART LRR_sd22_2 577 600 - -
Cpe09g00101 1048 SMART LRR_sd22_2 98 124 - -
Cpe09g00101 1048 Pfam Leucine rich repeat N-terminal domain 39 72 IPR013210 -
Cpe09g00101 1048 PRINTS Leucine-rich repeat signature 685 698 - -
Cpe09g00101 1048 PRINTS Leucine-rich repeat signature 222 235 - -
Cpe09g00101 1048 Gene3D Ribonuclease Inhibitor 146 215 IPR032675 -
Cpe09g00101 1048 Gene3D Ribonuclease Inhibitor 368 517 IPR032675 -
Cpe09g00101 1048 SUPERFAMILY L domain-like 64 367 - -
Cpe09g00101 1048 Pfam Leucine Rich Repeat 531 553 IPR001611 GO:0005515
Cpe09g00101 1048 Pfam Leucine Rich Repeat 221 243 IPR001611 GO:0005515
Cpe09g00101 1048 Pfam Leucine Rich Repeat 294 315 IPR001611 GO:0005515
Cpe09g00101 1048 SUPERFAMILY L domain-like 372 624 - -
Cpe09g00101 1048 Gene3D Ribonuclease Inhibitor 38 145 IPR032675 -
Cpe09g00101 1048 ProSiteProfiles Protein kinase domain profile. 969 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00101 1048 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Cpe09g00101 1048 Pfam Leucine rich repeat 711 770 IPR001611 GO:0005515
Cpe09g00101 1048 ProSitePatterns Protein kinases ATP-binding region signature. 975 998 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00101 Cpe-Chr9:560966 Cpe09g00938 Cpe-Chr9:8414622 1.64E-97 dispersed
Cpe14g00116 Cpe-Chr14:625412 Cpe09g00101 Cpe-Chr9:560966 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00101 - - csv:101215443 1580.84