Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00102 ATGCCTAATGGTGCAGTTGCTGACCCGACCTTTCTGGCTTTCCCAATTCCCTGTTCATTGCCTAACTCCTCTGAATTCTCCAATTCCATAGGGAAAATGGATGGATATAGAGAAGCTTGTCTGCTTGGGGACAGCTTTGATCCGAATGGAGTTGTGAGGATGAGGGAAGATGAATATGATAGCAGATCAGGCAGCGACAACATCGATGGTGCTGTATCTGGGGATGATCAGGATGCTAACGATGAACAACGTCGAAAAAGGAAGAAGTACCATAGGCATACCCCCCATCAGATCCAAGAGCTTGAGATTTTCTTCAAGGAATGTCCTCATCCAGATGATAAACAAAGGAGTGAGCTCAGTAGGAGGCTTGGTTTGGAATCGAAGCAAGTGAAGTTTTGGTTTCAAAATCGTCGAACCCAGATGAAGACACAAATAGAACGCCATGAGAATGCAATTCTTAAGCACGAAAACGATAAGCTTCGGGCCGAGAATAGTGTGATGAAGGATGCTATTTCGAACCCAACGTGCAATACATGCGGTGGACCTTCAATTCCTGTTCATCTATCGTTCGAGGAACACCAGCTTAGGATTGATAATGCCAGATTAAGGGATGAACTGCACCGGTTATACACCGTCACCAACAAGTTCTTGGGCTGGCCAGTTTTGCCCTTTGTCAATCATAGCTCTTCAGTGAGCTCAGACTCGTGCTTGGAACTTTCTGTTGGAAGAAATGGAATGGGAAATTTGAGTAACATTTCTGATCCTATGCCTATGGGGCTTAACTTGGGAAACGGACTTTTCAATGGTGGCCCTGTGATGCCTATTAGTAAGTCTCAAATGGGCATGCCAGGCAATGATATACCAATTGACAGAACAATATATGTGGATCTTGCTTTGGCTGCTATGGATGAATTGGTTAAGATGGCTCAAATTGATACTCCCCTTTGGATCAGAAGCCAGGATAGCAGTGGCAAAGAGACGTTGAACTTCAACGAATATTCCAGGACATTTCCTTCGTCGGCTGCCATGAAACACACTAATTGGACGACAGAAGCTACCAGAGATACTACAATGGTCATCATCAACAGCATGGCACTCATCGAGACGTTGATGGATGCAAACCGATGGGCAGAAATGTTTCCTTGTTTGATTGCTAGAGCCACTACAATCGATGTGATATCAAATGGCATGGGTGGAACTAGAAATGGTTCATTACAATTGATGCATGCTGAACTTCGAGTACTTTCCCCGCTTGTTCCTGTTCGTACTCTTAAGTTCCTCCGCTTCTGCAAGCAGCATGCTGATGGTCTGTGGGCTGTAGTTGATGTTTCCCTCGGAGAAGGCGCGGATGCAGACATGTTTTTCAGTTGCAGGAGGCTTCCTTCCGGCTGTATTGTGCAAGATATGCCTAATGGTTTCTCCAAGGTTACATGGGTGGAACATACAGAATATGATGAAACTGTTGTACACCAACTTTACCGCCAGATAATTAGTTGGGGCATCGGCTTCGGTTCGCAACGGTGGCTTGCTACCCTTCAAAGACAATGTGACTGTCTGGCAATTCTTATGTCTTCTACGGAAGATCCTGCAGGAATATCGCCACACGGTAGGAGAAGTATGCTGAAACTATCCCAGCGTATGGTTGATAACTTCTGTTCTGGGATTTGTACTTCGACATTGCAGAAGTGGGACAAGCTTGTTGTTGGCAATATTAGTGAAGATGTAAAAATGATGGCTAGAAACAGCATCAACGATCCTGGCGAGCCACCGGGTATCGTGTTGAGCGCTGCAACTTCTGTTTGGATGCCAGTAACTCAGCAGAGATTGTTTGCATTCTTGCAAGACGAGTGCTTACGTAGCGAATGGGACATTTTATCCAATGGCAGGCCAATGATAGAGATGCTTCGCATATCGAAAGGCCAGGGACTGGATAACCGTGTTTCTCTCCTGCGCGCTAACCCCATGAATGCTAATGAGAACACCATGCTTATATTGCAAGAGAGTTGGACTGATATTTCAGGCTCACTGATCGTTTACGCTCCAGTCGACGCAGCCTCCGTTAACTTGGTGATGCGTGGAGGAGATTCGGCTTATGTATCGCTACTACCTTCAGGATTCGCCATTCTCCCCGATGGCCCATCCAACTATGCTTCTACTAACAACGACAAAGACGGTCCGATCATGTCAGACATTAACAGTGGCTATGCTGGTGGATGCCTTCTCACAGTTGCATTCCAAATCTTGGTGAATAACCTTCCAACAGCCAAACTCACCGTTGAGTCAGTTGAGACAGTTAACAATCTCATTTCTTGCACCATCCAAAAGATCAAAGTCGCCCTTCGAGTATCGTAA 2352 45.71 MPNGAVADPTFLAFPIPCSLPNSSEFSNSIGKMDGYREACLLGDSFDPNGVVRMREDEYDSRSGSDNIDGAVSGDDQDANDEQRRKRKKYHRHTPHQIQELEIFFKECPHPDDKQRSELSRRLGLESKQVKFWFQNRRTQMKTQIERHENAILKHENDKLRAENSVMKDAISNPTCNTCGGPSIPVHLSFEEHQLRIDNARLRDELHRLYTVTNKFLGWPVLPFVNHSSSVSSDSCLELSVGRNGMGNLSNISDPMPMGLNLGNGLFNGGPVMPISKSQMGMPGNDIPIDRTIYVDLALAAMDELVKMAQIDTPLWIRSQDSSGKETLNFNEYSRTFPSSAAMKHTNWTTEATRDTTMVIINSMALIETLMDANRWAEMFPCLIARATTIDVISNGMGGTRNGSLQLMHAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSLGEGADADMFFSCRRLPSGCIVQDMPNGFSKVTWVEHTEYDETVVHQLYRQIISWGIGFGSQRWLATLQRQCDCLAILMSSTEDPAGISPHGRRSMLKLSQRMVDNFCSGICTSTLQKWDKLVVGNISEDVKMMARNSINDPGEPPGIVLSAATSVWMPVTQQRLFAFLQDECLRSEWDILSNGRPMIEMLRISKGQGLDNRVSLLRANPMNANENTMLILQESWTDISGSLIVYAPVDAASVNLVMRGGDSAYVSLLPSGFAILPDGPSNYASTNNDKDGPIMSDINSGYAGGCLLTVAFQILVNNLPTAKLTVESVETVNNLISCTIQKIKVALRVS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 569079 573212 - Cp4.1LG09g00910.1 Cpe09g00102 474468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00102 783 MobiDBLite consensus disorder prediction 57 94 - -
Cpe09g00102 783 CDD START_ArGLABRA2_like 296 516 - -
Cpe09g00102 783 Coils Coil 138 165 - -
Cpe09g00102 783 SUPERFAMILY Bet v1-like 288 518 - -
Cpe09g00102 783 SMART START_1 296 518 IPR002913 GO:0008289
Cpe09g00102 783 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 37 781 IPR042160 -
Cpe09g00102 783 ProSiteProfiles START domain profile. 287 521 IPR002913 GO:0008289
Cpe09g00102 783 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 37 781 - -
Cpe09g00102 783 SUPERFAMILY Homeodomain-like 70 144 IPR009057 -
Cpe09g00102 783 Pfam Homeodomain 87 142 IPR001356 GO:0003677
Cpe09g00102 783 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Cpe09g00102 783 SMART HOX_1 86 148 IPR001356 GO:0003677
Cpe09g00102 783 Gene3D - 73 159 - -
Cpe09g00102 783 CDD homeodomain 87 144 IPR001356 GO:0003677
Cpe09g00102 783 Pfam START domain 297 517 IPR002913 GO:0008289
Cpe09g00102 783 SUPERFAMILY Bet v1-like 544 775 - -
Cpe09g00102 783 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00102 Cpe14g00118 CCT
Cpe09g00102 Cpe14g00118 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00102 Cpe-Chr9:569079 Cpe20g00379 Cpe-Chr20:2136801 0 dispersed
Cpe14g00118 Cpe-Chr14:638199 Cpe09g00102 Cpe-Chr9:569079 8.65E-09 wgd
Cpe17g00350 Cpe-Chr17:2471558 Cpe09g00102 Cpe-Chr9:569079 1.13E-112 wgd
Cpe03g01710 Cpe-Chr3:12998014 Cpe09g00102 Cpe-Chr9:569079 5.14E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49956 PF01852 START 1.30E-44 CL0209 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00102 K09338 - csv:101218216 1345.1