Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00106 ATGACTGGTCTGGCTGGCTACCTAGACGCTAGCCGCCAAGGGGTGGTGGCTTCAATGGCATCTTCTCGTTTGGCTGGAGGATTAGCGCAGTCTTCATCGAGTTCTGGGATTTTCTACCAAGGAGAAGGGCAGTCTTCAGCTATTGTTAATTCCCACTTGAGCCAATCATTTGCAAATTCATCGGGTTCAATTCCAGGAACTGGATGTTCTGATTTTGGTCCAGTTTCCGGAGACATGAATAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGCACAGCAAGGTGCTTCACATGCCACATCATTACCAACATCACAAATAGGCCAAGTACCACTTCCCCTGGGTGCAAAATTTCAGGGGTCTTTTATTCCAGATCCAAATAATTATTCTCAGATGCAGAAGAAACCACGACTGGATATAAAGCAGGAAGATGTGCTGCAACAGCAAGAGAATAGTATAGCCTACTGGAGAAAGTTTGTGGCAGAGTATTACTCTCCTCGTGCGAAGAAAAGATGGTGCTTGTCATTGTACGAGAATGTTGGCCACCATGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCGTGGCACTGCGACATCTGTGGCTCCAAATCAGGAAGGGGATTTGAGGCCACGTTTGAAGTTCTCCCAAGACTCAACGAGATCAAATTTGGAAGTGGAGTTATTGATGAGCTTTTATTTCTGGACCGTCCACATGAAAGGAGCTTTCCTTCTGGAATTATGATGTTAGAATATCAAAAAGCAATTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCATCTTCGTATCATATTCACACAAGACTTGAAGATTTTGTCTTGGGAATTTTGTGCACGGCGTCATGAAGAACTTCTTCCACGTAGGTTGGTTGCACCTCAGGTGAATCAGCTGTTACAGGTTGCCCAGAAAAGCCAAAGCACAATTGCTGAAAGTGGTCCTGATGGTGTCTCTCAGAAAGATTTGCAGGCAAATAGCAATATGGTACTGACGGCTGGTCGTCAGCTTGCTAAAAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCTCTAAAAGATACGTGAGATGCTTGCAGATATCAGAGGTTGTCAACAGAATGAAAGATCTGATTGGCTTCTGCCGAGATCAAAAAGTTGGGCCTATTGAGGGCTTGAAAAATTATCCCAGACATGCCACTGCAGCCAAGCTCCAGATTCAGAAAATGCAGGAGATGGAGCAATTAGCAAGCATTCAAGGTCTTCCCACAGATCGCAACACAATGAATAAGCTGATGGCAATGCATTCTGAGCTTGATAATCATGGGATTAACAACCATCAAATGATTGGTCGAGGAGGTATGAGTGGTTCACAAGCCGCTTTGGCACTGACTACATACCAGAATATGCTCATGAGACAAAGCTCTATGAATTCCAACCCGAGCCCAAACCAACAGGAGGCCTCGTCATCTTTCAATAATGCCAACTATAATCCATCCCCTACACTCCATGGGACTGCATCCTTGATGCCTGGATCTATACAGAACTCCTCTGTCGGTGGCTTTTCAAGCGTTCAGCAAACCTTGCAAAAGCAATCGCAGCAGCTGCAGCAGCATCCACCGAATACTGGCTCCTTGGTCCAACAAAATCATCCTCAGACAATTCAAGGTAGCCAGGCCATACAACAACAGATGATCCAACAACTACTGCAGATGTCAAGTAACAGTAAGAGTGGTGGTGCACAACAGCAGCCCCTGACAGGACCAAATGCAAATAGAAGTTTGGGAAGAAGGGGTATGAGTTTTGTGGGCAATAGTACATCAGTTGTAGCTGGGAGCAATGCCCCTGGCCCTGGCCCGAGTAGAAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAGTCCTCAGCTGGTAACAGTGGATTCAATCAGAAGGCTTCTGATTTGCAGCAAGATCTTCCTCTGCCTGAGGGTCTGGTAGAAGATATAGGCCAAGATTTCCCTGAAAATGGGTTTATAAACAATGACCTTGACGAGGATTTGGGTTATGTCTGGAAGGCTTGA 2073 45.63 MTGLAGYLDASRQGVVASMASSRLAGGLAQSSSSSGIFYQGEGQSSAIVNSHLSQSFANSSGSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSAQQGASHATSLPTSQIGQVPLPLGAKFQGSFIPDPNNYSQMQKKPRLDIKQEDVLQQQENSIAYWRKFVAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWHCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDRPHERSFPSGIMMLEYQKAIQESVYEQLRVVREGHLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLLQVAQKSQSTIAESGPDGVSQKDLQANSNMVLTAGRQLAKSLELQLLNDLGFSKRYVRCLQISEVVNRMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQIQKMQEMEQLASIQGLPTDRNTMNKLMAMHSELDNHGINNHQMIGRGGMSGSQAALALTTYQNMLMRQSSMNSNPSPNQQEASSSFNNANYNPSPTLHGTASLMPGSIQNSSVGGFSSVQQTLQKQSQQLQQHPPNTGSLVQQNHPQTIQGSQAIQQQMIQQLLQMSSNSKSGGAQQQPLTGPNANRSLGRRGMSFVGNSTSVVAGSNAPGPGPSRSNSFKAASNSESSAGNSGFNQKASDLQQDLPLPEGLVEDIGQDFPENGFINNDLDEDLGYVWKA 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 607677 615017 - Cp4.1LG09g01150.1 Cpe09g00106 474472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00106 690 MobiDBLite consensus disorder prediction 83 106 - -
Cpe09g00106 690 PANTHER LIM DOMAIN-BINDING PROTEIN 23 95 IPR029005 -
Cpe09g00106 690 PANTHER LIM DOMAIN-BINDING PROTEIN 152 684 IPR029005 -
Cpe09g00106 690 PANTHER LIM DOMAIN-BINDING PROTEIN 127 151 IPR029005 -
Cpe09g00106 690 MobiDBLite consensus disorder prediction 577 595 - -
Cpe09g00106 690 MobiDBLite consensus disorder prediction 603 653 - -
Cpe09g00106 690 MobiDBLite consensus disorder prediction 577 676 - -
Cpe09g00106 690 MobiDBLite consensus disorder prediction 478 565 - -
Cpe09g00106 690 Pfam LIM-domain binding protein 150 398 IPR029005 -
Cpe09g00106 690 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 23 95 - -
Cpe09g00106 690 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 152 684 - -
Cpe09g00106 690 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 127 151 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe09g00106 Cpe14g00123 CCT
Cpe09g00106 Cpe14g00123 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00106 Cpe-Chr9:607677 Cpe13g00659 Cpe-Chr13:6223255 4.15E-103 dispersed
Cpe14g00123 Cpe-Chr14:660969 Cpe09g00106 Cpe-Chr9:607677 0 wgd
Cpe05g00678 Cpe-Chr5:4134053 Cpe09g00106 Cpe-Chr9:607677 1.74E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00106 - - csv:105434391 887.486