Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00117 ATGGCTAAAAATGCGACAGTCTTGTTTCTAATGATGATTGTTTGTGTGTCGGAAGCAGTTCTTCATACCAATTATTACTCTAAAACATGTCCCAATGCGGAGAAAATCATCCTCCAAACCGTCTACAATGCTTCCATTCATGACCCGAAAGTCCCTGCTCGTCTTCTCAGGCTCTTCTTCCACGACTGTTTCATAAGGTCTGGGGGGCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAATGCTTCTGAAACCATCAACTTACCAGCCCCAACTTTCAATGTATCTCAACTAATCCAGAGCTTTGAAAACAGAGGATTGCAAGTTAAAGACTTGGTTGCTCTATCAGGGGCTCATACACTTGGATTCTCTCACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTTAGCACGATTCATGATACTGATCCAACTTTGGAATCTGGGTTTGCTCAAATTCTGAAAAACAAATGTCCAAAACCAAATTTGGACAAAAATGCAGGACAGTTCTTGGACCCAACTTCATCAACTTTTGACAATGTGTATTACAAGAGATTGTTGGAAGGAAAGGGTGTGTTTGGTTCGGATCAATCTCTGTTTGGTGATTCAAGAACTAAAACGATTGTTGAATCGTTTGCTAATGAGCAGAACTTGTTCTTTAAGGAATTTGCAGCTTCAATGGTGAAATTGGGTAATGTTGGGGTTATTGAAAATGGCAATGTCAGATTCAATTGCAGGGTGGTGAACTGA 762 40.42 MAKNATVLFLMMIVCVSEAVLHTNYYSKTCPNAEKIILQTVYNASIHDPKVPARLLRLFFHDCFIRSGGPYWSVLKGRKDGKISNASETINLPAPTFNVSQLIQSFENRGLQVKDLVALSGAHTLGFSHCSSFQSRLRNFSTIHDTDPTLESGFAQILKNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQSLFGDSRTKTIVESFANEQNLFFKEFAASMVKLGNVGVIENGNVRFNCRVVN 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 677352 679215 + Cp4.1LG09g01080.1 Cpe09g00117 474483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00117 253 PANTHER PEROXIDASE 25-RELATED 5 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 PANTHER PEROXIDASE 25-RELATED 67 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 ProSitePatterns Peroxidases proximal heme-ligand signature. 115 125 IPR019793 -
Cpe09g00117 253 CDD secretory_peroxidase 21 252 IPR033905 GO:0004601|GO:0042744
Cpe09g00117 253 Pfam Peroxidase 67 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 Gene3D Peroxidase, domain 2 93 234 - -
Cpe09g00117 253 PRINTS Plant ascorbate peroxidase signature 109 130 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 PRINTS Plant ascorbate peroxidase signature 68 80 IPR002207 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 SUPERFAMILY Heme-dependent peroxidases 21 253 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 ProSiteProfiles Plant heme peroxidase family profile. 53 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 PANTHER PEROXIDASE 66 5 67 - -
Cpe09g00117 253 PANTHER PEROXIDASE 66 67 252 - -
Cpe09g00117 253 Gene3D - 21 66 - -
Cpe09g00117 253 Gene3D - 67 253 - -
Cpe09g00117 253 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe09g00117 253 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00117 Cpe-Chr9:677352 Cpe19g00876 Cpe-Chr19:6426026 8.16E-67 dispersed
Cpe15g00897 Cpe-Chr15:8634779 Cpe09g00117 Cpe-Chr9:677352 1.25E-41 dispersed
Cpe17g01082 Cpe-Chr17:8212152 Cpe09g00117 Cpe-Chr9:677352 8.41E-40 dispersed
Cpe09g00117 Cpe-Chr9:677352 Cpe07g00349 Cpe-Chr7:2261224 8.58E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00117 K00430 - csv:101210306 335.495