Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe09g00178 | ATGTTCATCTATTACAGAGAATGTCTCAAGAATCACGCCGCCACCGTCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTTATGCCTTTACTTACCGCCACACCCTCCGATCCCACTTCTCTAAATTGCGCAGCCTGTGGTTGCCACCGCAACTTCCACCGCCGTGAACCGGACGATTCCTGGCAGAATCTCCCCACCCACCGACGTTTCCAATCATATCGCCTCTGCACACCGCCGTCGCCGAAGCCTCAAAGCCCATCCTCGCCGATCCCTTTACAGATTTCGCACATCCCACCGCCAGTTCACTTCTCCGCCCCTCATATGTTGCTGGCATTGAGCACCGGCGCGGCGGCGCAAGAGCAGCGTGGCGGTCGATTCAACCCAAAACAGAGGAAGAGAAACAGGACCAAATTCAGCAGGGATCAAAAGCAAAAGATGCGATCTTTCTCCGAGAAAATGGGATGGAAAATTGGGAAATGTGATGAAAGGTTAGTGGAGGAATTCTGTAATGAAATTGGGATCGGAAAACGGGTGCTTAGAGTTTGGATGCATAATAACAAATACATGGGAGGAAGAACAGAGAAAAACAGAGATTCTCAGAGTAGCGAAAATGGAAGGGATGACTCAAAACAGAGCTCATAA | 642 | 51.56 | MFIYYRECLKNHAATVGGHALDGCGEFMPLLTATPSDPTSLNCAACGCHRNFHRREPDDSWQNLPTHRRFQSYRLCTPPSPKPQSPSSPIPLQISHIPPPVHFSAPHMLLALSTGAAAQEQRGGRFNPKQRKRNRTKFSRDQKQKMRSFSEKMGWKIGKCDERLVEEFCNEIGIGKRVLRVWMHNNKYMGGRTEKNRDSQSSENGRDDSKQSS | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1036932 | 1037573 | - | Cp4.1LG09g01800.1 | Cpe09g00178 | 474544 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe09g00178 | 213 | MobiDBLite | consensus disorder prediction | 190 | 213 | - | - | |
Cpe09g00178 | 213 | SUPERFAMILY | Homeodomain-like | 122 | 189 | IPR009057 | - | |
Cpe09g00178 | 213 | TIGRFAM | homeo_ZF_HD: homeobox domain, ZF-HD class | 131 | 188 | IPR006455 | - | |
Cpe09g00178 | 213 | MobiDBLite | consensus disorder prediction | 116 | 149 | - | - | |
Cpe09g00178 | 213 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 3 | 196 | - | - | |
Cpe09g00178 | 213 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 5 | 56 | IPR006456 | - | |
Cpe09g00178 | 213 | Gene3D | - | 115 | 191 | - | - | |
Cpe09g00178 | 213 | MobiDBLite | consensus disorder prediction | 189 | 213 | - | - | |
Cpe09g00178 | 213 | Pfam | ZF-HD protein dimerisation region | 4 | 57 | IPR006456 | - | |
Cpe09g00178 | 213 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 9-LIKE | 3 | 196 | - | - | |
Cpe09g00178 | 213 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 5 | 56 | IPR006456 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00513 | Cpe-Chr3:3026427 | Cpe09g00178 | Cpe-Chr9:1036932 | 5.11E-65 | dispersed | |
Cpe04g00062 | Cpe-Chr4:611328 | Cpe09g00178 | Cpe-Chr9:1036932 | 9.97E-60 | dispersed | |
Cpe09g00178 | Cpe-Chr9:1036932 | Cpe11g00465 | Cpe-Chr11:2623784 | 2.88E-46 | dispersed | |
Cpe01g02394 | Cpe-Chr1:19993956 | Cpe09g00178 | Cpe-Chr9:1036932 | 5.95E-65 | wgd | |
Cpe13g00949 | Cpe-Chr13:7977814 | Cpe09g00178 | Cpe-Chr9:1036932 | 4.83E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49965 | PF04770 | ZF-HD_dimer | 4.80E-28 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe09g00178 | - | - | cmo:103489117 | 307.375 |