Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00209 ATGTTTCTCCAAATAAATCCCTATCCCACCCACCCTCCTCTACGCCATCATCACTGTGAGCTTTCAATATCCCCGCCGAGAAGAAACCTCATTACAGAGCTTTCTTTTCCAACCCCTATGGATCATTGGGTGACAACAGATGAGGACATTGACAGACAACAACGAGCCAGTAGAACACAAACATACTTGTTTCCCCTGAAATCCCAATCTTTCAGAGAGAAAACAACGGCGGGCTGGTTGGGAAGGCAATTTTTGCAGCAAATGAGTCGAGGGAATGAATTTTCCGACGACGAAATAGAGCGTGTAACCGCCGTAGCCGCCGCCGCCTACGCAATTCATTCCATTCAGAATTCAGAAATTGCGAGACGCAAAAAGAATGCCGATTATCCTGAAACGTCGTCGTTCCCAAAGTTTACACACCTCAAGGAAGACAATCGCCCCCCCACTCCTCGTCCGGCGCCGGAACCTGCTAAGCTTTCCCGGCGGTTAATAGATAAAGATCTTCTGAAAGATCCTGAAGAAAGCCCAGTAAGGAATGTGTCAGTGACCCACGAACAACCAAAACAGAAACCAACGGAAAAGACAACCGATCCCGGTAACCGTCCATACTTCAAAGAGACAGCTTTTTCCGGCAACAAACCAGACATCTCCGGCAGCCGAAGAACAGAACCAGAGAAACCATCAAACATCTCCGGCAGCCGAAGAACAGAACCAGAGAAACCAGCAGGCATCTCCGGCAGCCGAAGAACAGAACCAGAGAAATCAGCAGACATCTCCGGCCGGCGAAGAACAGAACCAGAGAAACCAGCGGTAGTCCCAAGACCTCCAACTCCAATTAATCGGCCGACCGACCCACAAAAACCACTCCCAACCCAAACCAGACCTTATGATTCAAGAGAAACAAAAGCAGATCAGTGGGAAAAGGCTGAGATGGCTAAAATCAACGAGAGATTCCATAAAGTGAACGAGACAGTATCTTACTGGGAAAGAAAGAAGAGGGACAAAGCCATGAGGAAATACGAAGAATCACAGGCTGCGGGCGTGAAGAGGTCGAAGAGGGAAAAAGGAAGAAAGAAATTCGAGGAAGACATGGATTTCATAAAGCAAATTGCAGAAGAAGCAAGAGCCAAAGCCGATCAAAAGCGAAGAAATGATATTCTTAAAGCTAATCAAAAAGCAGATATTATCAGACAAACAGGGGACCTCCCTGTTTCTTGTTCCTGCTGCTGA 1230 47.32 MFLQINPYPTHPPLRHHHCELSISPPRRNLITELSFPTPMDHWVTTDEDIDRQQRASRTQTYLFPLKSQSFREKTTAGWLGRQFLQQMSRGNEFSDDEIERVTAVAAAAYAIHSIQNSEIARRKKNADYPETSSFPKFTHLKEDNRPPTPRPAPEPAKLSRRLIDKDLLKDPEESPVRNVSVTHEQPKQKPTEKTTDPGNRPYFKETAFSGNKPDISGSRRTEPEKPSNISGSRRTEPEKPAGISGSRRTEPEKSADISGRRRTEPEKPAVVPRPPTPINRPTDPQKPLPTQTRPYDSRETKADQWEKAEMAKINERFHKVNETVSYWERKKRDKAMRKYEESQAAGVKRSKREKGRKKFEEDMDFIKQIAEEARAKADQKRRNDILKANQKADIIRQTGDLPVSCSCC 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1215730 1219810 - Cp4.1LG09g02160.1 Cpe09g00209 474575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00209 409 PANTHER REMORIN FAMILY PROTEIN 51 409 - -
Cpe09g00209 409 MobiDBLite consensus disorder prediction 241 269 - -
Cpe09g00209 409 MobiDBLite consensus disorder prediction 121 305 - -
Cpe09g00209 409 MobiDBLite consensus disorder prediction 270 289 - -
Cpe09g00209 409 Coils Coil 357 384 - -
Cpe09g00209 409 MobiDBLite consensus disorder prediction 158 178 - -
Cpe09g00209 409 MobiDBLite consensus disorder prediction 218 233 - -
Cpe09g00209 409 MobiDBLite consensus disorder prediction 338 360 - -
Cpe09g00209 409 Pfam Remorin, C-terminal region 298 404 IPR005516 -
Cpe09g00209 409 PANTHER OS02G0116800 PROTEIN 51 409 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00209 Cpe-Chr9:1215730 Cpe01g01603 Cpe-Chr1:9786483 6.57E-09 dispersed
Cpe01g01495 Cpe-Chr1:8925633 Cpe09g00209 Cpe-Chr9:1215730 4.26E-38 wgd
Cpe02g01040 Cpe-Chr2:9608247 Cpe09g00209 Cpe-Chr9:1215730 8.69E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00209 - - cpep:111802427 823.542