Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00214 ATGGCGGGATTGCGATTATCATGGACCTGCGCTCATTCTAATCCTGAGTCCTCAAGATCCAAATTCTTCTCTCGCTTCAGTGCAGAGTCCAGTTTTCGGTGTACTTGGACGAGGCTTCTGTTGTTTAGAACTTCGGTTTCGAGTTCTGCAAGAAGGAAGCTATGCATTAGGAACGTAGCCAACGATCAACAGAAGGAAATGAAGGAGCGCGTCAACGGAGGAGTTGTAGACGACTGCGATACCTTTTTTCCAGATTCGGAATCCATTGCTGCGAGTATTAAGTACCATTCGGAATTCACGCCTTCTTTCTCTCCGGAGGGCTTTGGGCTTTCTAAGGCATTCTATGCTACTGCTGAAAGTGTTCGTGATTTGCTTATCATCAATTGGAATGCTACGTATAACTACTATGAAAAGATGAATGTGAAGCAAGCCTACTATCTGTCTATGGAGTTTCTACAGGGTAGAGCATTGCTAAATGCAATTGGAAATTTAGAACTATCAGGAGCTTATGCAGATGCTTTAAGAATGTTAGGATGTAATCTCGAGGAGGTGGCACAGCAGGAATCAGATGCTGCACTAGGAAATGGAGGATTAGGGCGGCTTGCTTCCTGCTTTCTGGACTCCCTGGCAACATTGAACTATCCAGCATGGGGTTATGGACTCAGATACAAGTATGGTTTGTTCAAACAGCTCATTACAAAAGATGGGCAGGAGGAAGTGGCTGAAAATTGGCTAGAGATGGGCAATCCCTGGGAGATTCCAAGAAACGACATCTCCTATCCTGTGAAATTCTATGGTGAAGTCATTTCTGGCGCAGATGGAAGTAAGCAATGGGTTGGAGGAGAAAATGTAACTGCTGTTGCCTATGATGTTCCAATACCAGGTTATAAAACTAAAACCACCATAAACCTCCGTTTGTGGTCCACAAAGGTTGCTCCCGAAGAGTTTGATTTGAATTCTTTCAATGTTGGAGATCATGCCAATGCATATGCAGCCATAAAGAAAGCTGAAAAGATCTGTTACGTACTGTACCCCGGAGATGAATCACTGGAGGGAAAGACTCTTAGACTGAAACAACAGTACACATTGTGCTCTGCTTCCCTTCAAGATATTGTCGCACGTTTTGAGAGGAGATCCGGGGAGTCTGTGGACTGGGAAAATTTTCCAGAAAAGGTGGCTGTGCAGATGAATGATACCCATCCTACACTCTGTATCCCGGAGCTGATAAGAATATTGATGGATGTGAAAGGCTTGAGCTGGAAAGAAGCTTGGAACATCACACAAAGGACTGTAGCCTACACAAATCATACAGTTCTGCCCGAGGCGCTGGAAAAATGGAGTTTCCCCCTCATGCAGGAATTATTTCCTCGACATGTTCAGATAATTGAAATGATTGACAAGGAGCTTATCCATTCCATCATTGCTCAGTACGGTACAAAAGATCTTGAGTTGTTGCAACAAAAGCTGAAGCAAATGAGAATTCTAGAAAATTTTGAATTACCAGACTCGGTCATGGAACTGCTAGTAAAATCAGCGGAGGAGCCTGCGGTCGATCTCGTTGAGGAAGCTGAAAGTATAGATGAGGAATCGTTACCTGATAAAGAAGACGAGTCTGAAGACAAAGTTACTGTAAATAAAGTAGATGCTTCGTTTAAAGTTGATCCAAAGCATCCAAGGATGATTCGCATGGCTAATTTGTCTGTTGTTGGTGGGCATGCTGTAAATGGTGTTGCTGAAATTCATAGTGAAATTGTTAGAACCGAAGTTTTTAACGACTTCTATGAGTTGTGGCCTGAGAAATTTCAAAATAAAACGAACGGAGTGACACCGAGAAGATGGATTCGTTTTTGCAATCCGGACCTGAGTAAAATCATCACAAAGTGGACTGGAACGGAGCACTGGGTGACAGATACCGAGAAACTGGCAATACTACGAAAGTTCGCTGATAACGAGGATCTCCAGTCCATGTGGAAGGAAGCTAGAAGAAGAAACAAATTGAAAGTTATCTCTTTTCTTGAAGAAAAAACTGGTTATTTAGTCAGCCCTGATGCAATGTTTGATGTACAGATTAAACGCATCCACGAATACAAGCGGCAGTTGTTGAACATCCTGGGGGTGGTCTATCGTTATAAACAAATGAAAGCAATGACTCTCGAGGAAAGAGAAGCTAAGTTTGTTCCTCGAGTCTGTATCTTTGGCGGGAAAGCATTTTCCACATATGTCCAGGCCAAGAGGATTGTGAAATTTATTGTTGATGTTGGAGCTACCGTCAATAACGATAGTGACATAGGAGACCTTTTGAAGGTAGTCTTTGTTCCAGACTACAACGTGAGTGTAGCAGAAGTGCTCATTCCTGGTAGTGATCTATCCCAGCATATCAGCACGGCGGGAATGGAGGCCAGTGGAACCAGCAACATGAAGTTTGCGATGAATGGCTGCATACTAATTGGAACATTAGATGGGGCAAATGTGGAGATAAGGGAAGAGGTTGGAGAAGACAACTTTTTCCTCTTTGGTGCAAGGGCGCATGAAATTGCTGGTCTAAGAAAAGAAAGGGCTGAAGGGAAGTTTGTTCCTGACCCACGGTTTGAGGAAGTGAAGGACTTCGTAAGAAGTGGGGTTTTTGGTCCCCATAACTATGAAGAACTCATGGGATCTTTAGAAGGAAATGAAGGTTTCGGTCGGGCAGACTATTTCCTCGTTGGCAAGGACTTCCCTAGTTACATAGAGTGCCAAGAGAGGGTTGATGAGGCCTATCGAGATCAAAAGAGATGGACCAAGATGTCGATCTTAAACACAGCTGGTTCATACAAGTTCAGCAGTGACAGAACCATTCATGAGTATGCAAGAGACATATGGAAGATTTCTCCACTACTGCTATCTTAA 2886 43.42 MAGLRLSWTCAHSNPESSRSKFFSRFSAESSFRCTWTRLLLFRTSVSSSARRKLCIRNVANDQQKEMKERVNGGVVDDCDTFFPDSESIAASIKYHSEFTPSFSPEGFGLSKAFYATAESVRDLLIINWNATYNYYEKMNVKQAYYLSMEFLQGRALLNAIGNLELSGAYADALRMLGCNLEEVAQQESDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIPRNDISYPVKFYGEVISGADGSKQWVGGENVTAVAYDVPIPGYKTKTTINLRLWSTKVAPEEFDLNSFNVGDHANAYAAIKKAEKICYVLYPGDESLEGKTLRLKQQYTLCSASLQDIVARFERRSGESVDWENFPEKVAVQMNDTHPTLCIPELIRILMDVKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFPLMQELFPRHVQIIEMIDKELIHSIIAQYGTKDLELLQQKLKQMRILENFELPDSVMELLVKSAEEPAVDLVEEAESIDEESLPDKEDESEDKVTVNKVDASFKVDPKHPRMIRMANLSVVGGHAVNGVAEIHSEIVRTEVFNDFYELWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWTGTEHWVTDTEKLAILRKFADNEDLQSMWKEARRRNKLKVISFLEEKTGYLVSPDAMFDVQIKRIHEYKRQLLNILGVVYRYKQMKAMTLEEREAKFVPRVCIFGGKAFSTYVQAKRIVKFIVDVGATVNNDSDIGDLLKVVFVPDYNVSVAEVLIPGSDLSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEDNFFLFGARAHEIAGLRKERAEGKFVPDPRFEEVKDFVRSGVFGPHNYEELMGSLEGNEGFGRADYFLVGKDFPSYIECQERVDEAYRDQKRWTKMSILNTAGSYKFSSDRTIHEYARDIWKISPLLLS 961
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1229204 1235929 + Cp4.1LG09g02060.1 Cpe09g00214 474580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00214 961 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 799 811 IPR035090 -
Cpe09g00214 961 CDD GT35_Glycogen_Phosphorylase 92 955 - -
Cpe09g00214 961 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 84 957 - -
Cpe09g00214 961 PIRSF Glucan_phosphorylase_GlgP 103 961 IPR000811 GO:0005975|GO:0008184
Cpe09g00214 961 Gene3D Glycogen Phosphorylase B; 611 940 - -
Cpe09g00214 961 Gene3D Glycogen Phosphorylase B; 78 610 - -
Cpe09g00214 961 Pfam Carbohydrate phosphorylase 175 955 IPR000811 GO:0005975|GO:0008184
Cpe09g00214 961 PANTHER GLYCOGEN PHOSPHORYLASE 30 960 IPR000811 GO:0005975|GO:0008184
Cpe09g00214 961 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 538 955 IPR011833 GO:0004645|GO:0005975|GO:0030170
Cpe09g00214 961 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 30 960 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01363 Cpe-Chr2:12002722 Cpe09g00214 Cpe-Chr9:1229204 0 dispersed
Cpe09g00214 Cpe-Chr9:1229204 Cpe16g00643 Cpe-Chr16:6849693 0 dispersed
Cpe09g00214 Cpe-Chr9:1229204 Cpe20g00449 Cpe-Chr20:2574808 5.84E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00214 K00688 - csv:101221746 1694.86