Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00218 ATGGCTTCGATGACTAGCGTAATACAGTCTCCGATTCGTGTATGTCGGTTGCCTTCACTTCCATTGACTCCGAATAGAACAGTTCCCGCCAGTTCTGTCGTTGTCAAGTGTCGATCACTTGCTTCTAAAGCTTTGAACACGCCGCTTTCACCGTTGACGGAGAATCGAACTGTTTCCCGGTCGGTGGAGCTATGTGGCAAGGCTATCGGACTCTTAAGCTCTAGACAACCGTTGACGTCTCGTAGTGTTGTTCGTCGGCTGGTCGTGAGGGCGTCTGCAGCTGATGCCGATGGAGCTTCCGATGGGTTGACTGGCCCTTCAAAGAGCTTTGCCGCAAGATTTCCGGCACTTGTTACTGGTTTCTACTTCTTTATGTGGTACTTTTTAAATGTTATTTTCAACATACTCAACAAAAAAGTCTACAATTATTTCCCATATCCATACTTTGTCTCTGTCATACATCTTCTTGTTGGAGTTGGATATTGTCTCATTTCTTGGGCTGTAGGTCTGCCAAAACGTGCTCCGATGGATAAGGAGCTCTTGCTGTTATTGACACCAGTTTCGCTATGTCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTGTCCTTCACTCACACTATCAAAGCCTTGGAGCCATTCTTTAACGCTGCTGCTTCTCAATTTATTTTGGGACATCAAATTCCTTTCAGCTTGTGGCTCTCTCTAGCACCTGTTGTCTTGGGTGTGTCAATGGCATCACTAACGGAGCTTTCCTTCAACTGGACTGGCTTTGTTAGTGCAATGATTTCAAACATTGCATTCACTTATAGAAGTATCTATTCGAAGAAGGCAATGACAGGAATGGACAGTACGAACGTGTATGCATACACCTCAGTAATTGCTCTTTTGTTTTGCATTCCTCCTGCAGTAATGATCGAAGGACCGCAGCTACTGCAGCATGGTTTTAAGGATGCCATTGCCAAAGTGGGTCTCCAAAAGTTCCTGTCTGATCTTTTCTGGATTGGAATGTTTTATCATCTATACAATCAGCTTGCCACTAATACTCTTGAACGAGTTGCACCATTAACACATGCTGTAGGAAACGTATTGAAGCGAGTTTTCGTGATTGGGTTCTCCATTGTTGTTTTTGGCAATAAAATCTCAACTCAAACTGGAATTGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAGCAAAAACGGAGGGCTGCTAAAATTCCAGCATCATAG 1275 44.08 MASMTSVIQSPIRVCRLPSLPLTPNRTVPASSVVVKCRSLASKALNTPLSPLTENRTVSRSVELCGKAIGLLSSRQPLTSRSVVRRLVVRASAADADGASDGLTGPSKSFAARFPALVTGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGVGYCLISWAVGLPKRAPMDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNIAFTYRSIYSKKAMTGMDSTNVYAYTSVIALLFCIPPAVMIEGPQLLQHGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRRAAKIPAS 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1251609 1256623 + Cp4.1LG09g02080.1 Cpe09g00218 474584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00218 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 299 406 - -
Cpe09g00218 424 Pfam Triose-phosphate Transporter family 118 405 IPR004853 -
Cpe09g00218 424 PANTHER SOLUTE CARRIER FAMILY 35 79 413 - -
Cpe09g00218 424 PANTHER TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC-LIKE ISOFORM X1 79 413 - -
Cpe09g00218 424 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 117 415 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cpe09g00218 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00218 Cpe-Chr9:1251609 Cpe10g00176 Cpe-Chr10:1037390 0 dispersed
Cpe09g00218 Cpe-Chr9:1251609 Cpe19g01035 Cpe-Chr19:7167860 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00218 K15283 - csv:101221040 690.649