Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe09g00219 | ATGGCGGTTTTCGTGTTCTTAGTGTTCTTCCTTGCCCTAACCGGTCAATCTTACGCCAACTATTGCTTGTGTAGAGATGGAGTGAGCCAACAAGTTCTTCAAAAAGCACTGGATTATGCCTGTGGCGCCGGAGCTGACTGTTCTCCGATCCTCTCCAATGGCGCCTGTTTTCAGCCGAACACTGTCAAAGATCACTGCAGCTACGCCGTCAACAGCTATTTCCAGAGAAAAGGTCAAGTCCAGGGAAGCTGTGACTTCTCCGGCGCCGCCACTCCCAGCGTTTCCCTCACCGCCTCTGTGCCCTCCGGCTGCGTCTACCCTTCGAACCCCAGCAATGCGGGAACCTCGCCGACGAACTCCGGCGGAACTACGCCGGGGACGACGAATCCGGGAATGACGCCGTCGGTATTCGGTAACGGAATCAGTCCGAGTGGGAGCGGCGCCGGGTTCAACGACGGGAGCGGTGGCGTGGGTTTCAATGAGAAGATGAACTTGCTTTTGAGTGTGGGCTTAACTCTGTGGCTTTCCGTACTGTTGTTCTAG | 543 | 55.8 | MAVFVFLVFFLALTGQSYANYCLCRDGVSQQVLQKALDYACGAGADCSPILSNGACFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGAATPSVSLTASVPSGCVYPSNPSNAGTSPTNSGGTTPGTTNPGMTPSVFGNGISPSGSGAGFNDGSGGVGFNEKMNLLLSVGLTLWLSVLLF | 180 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1257760 | 1259260 | + | Cp4.1LG09g02050.1 | Cpe09g00219 | 474585 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe09g00219 | 180 | SMART | X8_cls | 20 | 106 | IPR012946 | - | |
| Cpe09g00219 | 180 | Gene3D | - | 16 | 109 | - | - | |
| Cpe09g00219 | 180 | PANTHER | CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN | 1 | 171 | - | - | |
| Cpe09g00219 | 180 | MobiDBLite | consensus disorder prediction | 110 | 131 | - | - | |
| Cpe09g00219 | 180 | Pfam | X8 domain | 21 | 91 | IPR012946 | - | |
| Cpe09g00219 | 180 | PANTHER | BETA-1,3 GLUCANASE | 1 | 171 | IPR044788 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe07g00085 | Cpe09g00219 | CCT | |
| Cpe07g00085 | Cpe09g00219 | ECH | |
| Cpe01g01504 | Cpe09g00219 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00085 | Cpe-Chr7:413020 | Cpe09g00219 | Cpe-Chr9:1257760 | 3.58E-63 | dispersed | |
| Cpe09g00219 | Cpe-Chr9:1257760 | Cpe11g00388 | Cpe-Chr11:2138795 | 9.98E-47 | dispersed | |
| Cpe01g01504 | Cpe-Chr1:8973367 | Cpe09g00219 | Cpe-Chr9:1257760 | 1.01E-79 | wgd | |
| Cpe18g00701 | Cpe-Chr18:6952652 | Cpe09g00219 | Cpe-Chr9:1257760 | 1.41E-45 | wgd | |
| Cpe04g01466 | Cpe-Chr4:11667711 | Cpe09g00219 | Cpe-Chr9:1257760 | 3.64E-41 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe09g00219 | - | - | cmax:111467729 | 293.893 |