Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00223 ATGGGCGAAGCAAACGAAGCAGGAAGTAGAGGATTGGAGAGGGTTCCTCTGCAAATCGAGAAGTACCCAACAGATCTGTTGCAGAGATTTTTGTGTAGCGATTCACGTGAGGCTAAACTTGGGGGTTTTAATGAAGAGGATGAAGAAGAAGCAGGGGAGATTGAGCTCAATCTTGGGCTTTCACTTGGGGGTCGATTTGGGGTTGATAAAAATTCCAAACTTATTCGGTCGTCATCGGTTGTCGGGACGATACCGCTTTTGAGAGACGATGAGGGCTCTATTCCGGCGGCGGTGTCTTACCCGGCGCTGATTCGGACGGCGTCTCTTCCGCCGGAGACGGAGGAGGAGTGGAGGAAGAGGAAGGCGTTGCAGACATTGAGGCGAATGGAGGCGAAGAGGAGGCGGTTTGAGAAACAGAGGAGTAAGGATGGTATTGGGATTGAAGAAGAGAGGCGGGGAATTGATGGTCTTACTGTATTGAATTTGCGAGAGAAAAGGCCTTGTGCTGGTGTGTCGACGGTGGTGCCACCGTTTGGGTTGCCTACATGGGCTGCAACCGCCCGTCATGTTGGTGGAACTCTGGATGGTGGTGGCGGCGGTGGCGGTGGCGGTGGCTTACCGGTTGTCCGACAGCCCGCGTCGCAGTGTTCCGCTGAATCGCAGGGTGGAAGCTCGGGAATGTCGGAATTGGACAGCAAACACATCCAAGGAACAAGCAATTACGGTGAAGCGAGAAGCTCGTCGCAAGAACGAGGCAACCCAGAGGCTGCAGGTTCCATAGGATTGAATAAGGCGTGTGAGAACCCATCGGGCAGTTCGAAAGCAGAAACAAGAAACCCGAGCGAGAACCGGGGAAGAGAAACGGGAACGGCGTCGATGGAAGACATGCCATGTGTGTTCACAATAGGGGATGGGCCTGGTGGGAGAAGGGTGGAAGGGATACTTTACAAGTATGGGAAAGGGGAGGAAGTGAGGATAATGTGTGTATGCCATGGGAAGTTTCTGTCACCGGCGGAGTTTGTGAAGCATGCTGGTGGGAAGAATGTGGCTCATCCGCTAAGACACATAGTTGTCAATCCCAATTCTGGCCCTTCTTTGTGA 1101 53.13 MGEANEAGSRGLERVPLQIEKYPTDLLQRFLCSDSREAKLGGFNEEDEEEAGEIELNLGLSLGGRFGVDKNSKLIRSSSVVGTIPLLRDDEGSIPAAVSYPALIRTASLPPETEEEWRKRKALQTLRRMEAKRRRFEKQRSKDGIGIEEERRGIDGLTVLNLREKRPCAGVSTVVPPFGLPTWAATARHVGGTLDGGGGGGGGGGLPVVRQPASQCSAESQGGSSGMSELDSKHIQGTSNYGEARSSSQERGNPEAAGSIGLNKACENPSGSSKAETRNPSENRGRETGTASMEDMPCVFTIGDGPGGRRVEGILYKYGKGEEVRIMCVCHGKFLSPAEFVKHAGGKNVAHPLRHIVVNPNSGPSL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1279208 1281751 - Cp4.1LG09g02150.1 Cpe09g00223 474589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00223 366 MobiDBLite consensus disorder prediction 194 292 - -
Cpe09g00223 366 PANTHER AFP HOMOLOG 2 19 362 IPR031307 GO:0007165
Cpe09g00223 366 Pfam Tify domain binding domain 324 358 IPR032308 -
Cpe09g00223 366 Pfam Ethylene-responsive binding factor-associated repression 49 82 IPR012463 -
Cpe09g00223 366 Coils Coil 119 139 - -
Cpe09g00223 366 Pfam Putative nuclear localisation signal 103 231 IPR032310 -
Cpe09g00223 366 PANTHER NINJA-FAMILY PROTEIN AFP1 19 362 - -
Cpe09g00223 366 MobiDBLite consensus disorder prediction 213 254 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01507 Cpe09g00223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00223 Cpe-Chr9:1279208 Cpe09g01169 Cpe-Chr9:9902060 7.74E-25 dispersed
Cpe15g00147 Cpe-Chr15:1222340 Cpe09g00223 Cpe-Chr9:1279208 2.61E-20 transposed
Cpe01g01507 Cpe-Chr1:8992939 Cpe09g00223 Cpe-Chr9:1279208 0 wgd
Cpe20g00076 Cpe-Chr20:405994 Cpe09g00223 Cpe-Chr9:1279208 6.46E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00223 - - cmos:111450062 681.789