Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00224 ATGGATCCCCCACCCTCCTACCGCAGTCGCAGACTCACCAACAAACCTCAGCTATACTCCACAGTTGTCATCCATTCCAATTCTGATTCAGACGCCGACAACAAACCTTCCGATCGGAGACTTCAGCGCCGACGAAGACCGCCGAGCGAAGGTCAAGACCTATACGCCACAATGGTCTATAAGGACGTTGATAAGGGCCACGAGGACGAGGATGATGATGATTCGTCTCTCCCACCTCTCCTCAAACGTCTTCCAAAGGATTTCGGGGGTGGAGCCCCAATTGACTACAACGACGACGAAGATTTTGGATTTGATCACGATACTGAAGATTTTGGTACGGTGATCGTCAAAACAGGAAGGAGTCGCCCTCTTAATCGTTCTTTGTCTTCATCAGTTTCGGCGAAGCCTCGAAGTTCGGCGTTGCCATCCGTGAACTTTCAGACGGGGAGCTCCGGGACGAGATCAGGCGGTAGAGATGGTAGCGAGGAAGGCGATGTGAGCGAGGAAGATGATGGTGATGGGTATTCGACGTTCGTGGTGAAGCCCTCGGCGAGGTCGCGGAACAGAGAATCTGTTAGTGACACCATTCTTCGAAGGAGCGTTGCTAGTCGTAGTGATACCAGAGATGGAGGCGGAGGACTTGAGGGGTCCACGTTGGGCAGAGCGGTGGCGAGCATGCAAGGAATGGGAGACTTAGGGTTTGGGAAGCAGAGGAAGGGGAATGGATCGCCGAAGAGTGAGGAAGGCGGTGGTCGGATGCGCAGTAAGGTATCCACGAGTTCGATTCCTGAAAGCATCACCAGGGAAGATCCAAATACCAAGTATGAATTGCTCAACGAACTCGGAAAGGGGTCTTATGGGGCTGTTTATAAAGCAAGAGATATTAAGACCTCTGAGCTTGTTGCTATCAAGGTCATTTCTTTGTGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATCGAGATGTTGCAGCAGTGCAGTCATCCAAACGTTGTCCGCTATCTTGGGAGCTATCAAGGAGAGGAGTATCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACAGAAGAAGCACTAGAGGAATATCAGATAGCATATATCTGTAGGGAGGCATTGAAGGGCCTCACTTATCTTCATTCGATTTTCAAAGTACATAGAGATATCAAGGGCGGCAATATTTTGTTAACCGAACAAGGAGATGTCAAGTTGGGTGATTTTGGAGTTGCAGCCCAGCTAACTAGGACCATGTCAAAGCGCAATACATTCATTGGCACTCCCCACTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGATACGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATCGAAATGGCTGAGGGACTTCCTCCAAGATCAGCCGTGCATCCAATGAGGGTTTTATTCATGATATCCATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGTTGTTCCACGATTTTGTTGCAAAGTGTCTGACAAAAGATCCCCGTTCACGTCCTGCTGCTTCTGAGATGTTGAAGCACAAATTCATTGAGAAATGCAGATGTGGCGCATCAGCAATGTTGCCGAAGATTGAAAAGGCAAGGAAAATCAGGACTTTGTTGATGGCTCAGGAAGCTCGTAGTGTTCCTCCAGATGCGTCAGGAGATGGTACTATAGTAGCTGCAAAGTTGAATCAAAACTATGGAGATACTGTTCCTTCAAAACCTCAGAATGTTGGACTTCAGGTAGCAAATGAAATGTCATGGAGGAAGCAAGAGCAATCGGGTGTAGAAGCCGAAGGTAATGTGGATGTCATTCCAACTGCACCAACACTAACAATAGGTACTTTTGGCACTATGATAGTCCATGATGGAGATGAAAATGATAAGGTGGCCTCTCGACTGGATACTGGCAATGCTGTAGCACCAACTGGTCCTTCAAGCAATGAGAGCCAATCCGTTGGTGTAACTGGAGTCAAAATTGTGGACTCTAGTGTGGTGGATCGTACGGGAGGTATTGCTAGTAATAATCTTGATGGAAAATCAGATCCTGCCATTCCTGCATCTTCCCCTTCATTTTTGGGTATTCATGAGCTTAGCACGTTGGAAAATGAAACTGTCAGCCGGAAATCTTTTGCTCTGCAGGATAAGCTTTGGTCCATTTATGCAGCGGGTAACACTGTACCCATTCCATTCTTGCGAGCTACTGATATATCCCCCATTGCTTTGTTATCTGACAATGTTCTTGGAGGCATGCAACAAGATAACAGGGGTACTGTAGCAGTGGAAACGCTTCAGGAACTCTTCACCGGTGATGGACAATCAAAAAAGGGTCGCAGGGGACAAAATGAGATGCCCCTTCCATCCAGTGTTTATCAAAGACTTACTTCAAGTCCGACCCTATTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTATGAAGATATGCCGCTTCAGGAGTTGCAGGCGACTCAAGAACAACAAACCATCCAAAATCTTTGTGATACACTTAGAACTATCCTTCGATTGTAG 2574 47.2 MDPPPSYRSRRLTNKPQLYSTVVIHSNSDSDADNKPSDRRLQRRRRPPSEGQDLYATMVYKDVDKGHEDEDDDDSSLPPLLKRLPKDFGGGAPIDYNDDEDFGFDHDTEDFGTVIVKTGRSRPLNRSLSSSVSAKPRSSALPSVNFQTGSSGTRSGGRDGSEEGDVSEEDDGDGYSTFVVKPSARSRNRESVSDTILRRSVASRSDTRDGGGGLEGSTLGRAVASMQGMGDLGFGKQRKGNGSPKSEEGGGRMRSKVSTSSIPESITREDPNTKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEALEEYQIAYICREALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFVAKCLTKDPRSRPAASEMLKHKFIEKCRCGASAMLPKIEKARKIRTLLMAQEARSVPPDASGDGTIVAAKLNQNYGDTVPSKPQNVGLQVANEMSWRKQEQSGVEAEGNVDVIPTAPTLTIGTFGTMIVHDGDENDKVASRLDTGNAVAPTGPSSNESQSVGVTGVKIVDSSVVDRTGGIASNNLDGKSDPAIPASSPSFLGIHELSTLENETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDNRGTVAVETLQELFTGDGQSKKGRRGQNEMPLPSSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1284728 1294294 + Cp4.1LG09g02300.1 Cpe09g00224 474590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00224 857 SMART serkin_6 275 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00224 857 ProSiteProfiles Protein kinase domain profile. 275 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00224 857 Gene3D Transferase(Phosphotransferase) domain 1 271 559 - -
Cpe09g00224 857 SUPERFAMILY Protein kinase-like (PK-like) 273 530 IPR011009 -
Cpe09g00224 857 MobiDBLite consensus disorder prediction 24 268 - -
Cpe09g00224 857 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 217 847 - -
Cpe09g00224 857 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 217 847 - -
Cpe09g00224 857 MobiDBLite consensus disorder prediction 253 268 - -
Cpe09g00224 857 CDD STKc_MAP4K3_like 274 529 - -
Cpe09g00224 857 MobiDBLite consensus disorder prediction 31 50 - -
Cpe09g00224 857 Pfam Protein kinase domain 275 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe09g00224 857 MobiDBLite consensus disorder prediction 120 157 - -
Cpe09g00224 857 ProSitePatterns Protein kinases ATP-binding region signature. 281 304 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00695 Cpe-Chr2:4370141 Cpe09g00224 Cpe-Chr9:1284728 1.80E-59 dispersed
Cpe09g00224 Cpe-Chr9:1284728 Cpe13g00900 Cpe-Chr13:7689434 2.25E-52 dispersed
Cpe09g00224 Cpe-Chr9:1284728 Cpe06g00678 Cpe-Chr6:4198781 1.16E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62589 PF00069 Pkinase 8.00E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00224 - - csv:101209775 1340.48