Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00227 ATGGCTGTATGTGGGGATGATAAAGATAGAGTGCTGAGGATCCATGAAAGTTTGGAGGAACTTAGTACTGATTTAGCTGATTATATTGCTGAATTATCAGAGGCATCGGTGAAAGAACGTGGGGTGTTTTCTATTGCGTTATCTGGTGGTTCTGTCATTAACTTGATGGGAAAGCTCTGTGAAGCTCCTTACAATAAGACTGTCGACTGGGCCAAGTGGTATATATTTTGGGCTGATGAACGTGTTGTTGCAAAAAGCCATGCCGACAGCAATTATAAGCTTGCAAAGGACAACCTTCTTTCCAAGGTGCCAATTATTCCCAGCCATGTACACTCGATCAATGATTCTGTGTCGGCGGAGGAAGCTGCTGATGAGTACAAGTTCGTCATTCGACAGTTAGTTAAATCCCGCATCGTAAGCGTGTCTGATGTGAGTGACAGTCCTAAGTTTGACCTCATTCTTCTTGGAATGGGTTCTGATGGCCATGTTGCCTCATTATTCCCTGGTCACTCAGTGCTCGAAGAGAAAGATGAATGGGTTACCTTCATTACCAATTCTCCAAAACCTCCTCCAGAGAGGATCACCTTCACATTGCCTGTGATCAACTCTGCATCCAATGTAGCCATTGTTGTGACAGGTGAAAACAAAGCAGAGACCGTACATTTGGCCATTGACGACGTAGGACCCGACTGCCCACTCCTACCTGCGAGGCTGGTACAGCCAAAGAAAGGTAAGTTGGCATGGTTTTTGGATAAATATGCCGCTTGGAAACTTGACAATTACCAATTGCATGAACAGGCCTAA 804 44.9 MAVCGDDKDRVLRIHESLEELSTDLADYIAELSEASVKERGVFSIALSGGSVINLMGKLCEAPYNKTVDWAKWYIFWADERVVAKSHADSNYKLAKDNLLSKVPIIPSHVHSINDSVSAEEAADEYKFVIRQLVKSRIVSVSDVSDSPKFDLILLGMGSDGHVASLFPGHSVLEEKDEWVTFITNSPKPPPERITFTLPVINSASNVAIVVTGENKAETVHLAIDDVGPDCPLLPARLVQPKKGKLAWFLDKYAAWKLDNYQLHEQA 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1303048 1309092 + Cp4.1LG09g02270.1 Cpe09g00227 474593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00227 267 Gene3D - 8 260 - -
Cpe09g00227 267 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 261 IPR037171 -
Cpe09g00227 267 TIGRFAM pgl: 6-phosphogluconolactonase 14 257 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cpe09g00227 267 Coils Coil 18 38 - -
Cpe09g00227 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 263 IPR039104 -
Cpe09g00227 267 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 263 - -
Cpe09g00227 267 CDD 6PGL 19 250 IPR005900 GO:0005975|GO:0006098|GO:0017057
Cpe09g00227 267 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 18 248 IPR006148 GO:0005975
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01511 Cpe09g00227 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01513 Cpe-Chr1:9042498 Cpe09g00227 Cpe-Chr9:1303048 0 dispersed
Cpe09g00227 Cpe-Chr9:1303048 Cpe13g00329 Cpe-Chr13:2956234 2.52E-93 dispersed
Cpe01g01511 Cpe-Chr1:9019436 Cpe09g00227 Cpe-Chr9:1303048 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00227 K01057 - csv:101210739 479.944