Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe09g00230 | ATGGGGAAAACCGGCGGAAAGCTGCCGAGTTTTTGCCTGAACCGGATCCGGTCTCATGTTCGTGTGCCAATTCAGTCCAAACCGGACTCTGTTTCTGTGAAAACAGGGGAGAGGAAGGGCGGGGAGTTTGATGAGAGTAATGGCGGAGGTAAGCCGGCGTTGGGAATTGGAAGGAAGATAATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCAATGGGCGCTCTCAAATACGGTTCAGAATCAAGATATGATTGTTCTTCTCCATCTCACCAAACCTTCAAAAAAAGTTCATTCGATGAGAAATCTATGTCAATTGAAGCGACCGGAGGTGGAAATTGAAGTAGCAGTGGTGGAAGGGAAGGAGAAAGGGCCAGTGATTGTGGAAGAAGCAAGAAAGCAAGGGGCATCGTTGCTGGTTTTGGGGCAGAAGAAGAAACGGCCGACGACATGGCGGCTCCTGATGGTCTGGGCCGGCCACCGATGGGGTGGCGGTGGAGACGGCGGCGGCGGCACGGTGGAGTATTGTATTCAGAATGCGAGCTGCATGGCGATTGCAGTGAGAAGGAAGAGCAAGAAATTGGGCGGTTATTTGATCACAACAAAACGCCAAAAGGATTTCTGGCTTTTGGCTTGA | 645 | 50.7 | MGKTGGKLPSFCLNRIRSHVRVPIQSKPDSVSVKTGERKGGEFDESNGGGKPALGIGRKIMIVVDSTIEAEGALQWALSNTVQNQDMIVLLHLTKPSKKVHSMRNLCQLKRPEVEIEVAVVEGKEKGPVIVEEARKQGASLLVLGQKKKRPTTWRLLMVWAGHRWGGGGDGGGGTVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA | 214 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1323882 | 1325462 | + | Cp4.1LG09g02260.1 | Cpe09g00230 | 474596 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe09g00230 | 214 | Gene3D | HUPs | 56 | 195 | IPR014729 | - | |
| Cpe09g00230 | 214 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 58 | 193 | - | - | |
| Cpe09g00230 | 214 | CDD | USP_Like | 59 | 190 | - | - | |
| Cpe09g00230 | 214 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 214 | - | - | |
| Cpe09g00230 | 214 | MobiDBLite | consensus disorder prediction | 25 | 50 | - | - | |
| Cpe09g00230 | 214 | Pfam | Universal stress protein family | 106 | 191 | IPR006016 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe06g00633 | Cpe-Chr6:3916935 | Cpe09g00230 | Cpe-Chr9:1323882 | 3.65E-23 | dispersed | |
| Cpe09g00230 | Cpe-Chr9:1323882 | Cpe13g00614 | Cpe-Chr13:5940166 | 2.93E-22 | dispersed | |
| Cpe01g01516 | Cpe-Chr1:9064766 | Cpe09g00230 | Cpe-Chr9:1323882 | 1.16E-21 | wgd | |
| Cpe20g00090 | Cpe-Chr20:481830 | Cpe09g00230 | Cpe-Chr9:1323882 | 2.27E-54 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe09g00230 | - | - | cmax:111467624 | 389.808 |