Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe09g00233 ATGAACATGAGCTTTTCAAACGATATGGGCGATGAATATCAGAAGTTCATCAAGCGAATGAACCCACCCAGAGTCGTAATCGATAACAAATCCTGCAAGAACGCCACGGTTGTTCGGGTGGATAGTGCTAATAAACATGGCATTCTTCTTGAAGTTGTTCAAGTCTTGACTGATCTTAATCTTATCATAACTAAAGCTTACATTTCTTCTGATGGGAACTGGTTCATGGATGTTTTTAATGTCACGGATCAAAATGGAAACAAGGTTATGGATGAAGGGATTTTAGATTACATACAATCATCGCTCGGTCCCGATTCGTGTTGTTCATCTTCCATGAGATCTGTAGGTGTCGAATCTTCTACAGATCATACTGTAATTGAGCTCGTTGGCTGCGATCGACCTGGACTTCTTTCTGAAGTAACTGCTGTTCTTACTCATCTTAAATGTAGTGTAGAAAGGGCTGAGGTGTGGACACATAACACTCGAGTTGCTGCGGTGATGCACGTGAGCGACGAGGAAGCGTCGGTCACTGGTTCGGCAGTGACAGACTTGGAGAGATTGTCCACAATCAAGAAATTGCTTTGCAATGTTCTTAAAGGCAGCAACAAGTGCAGGGGAGCTAAGACTGTGTTCTCTCATGAGGCTATCCATACTGAGAGAAGACTTCACCAGATGATGTTTGCAGATCGAGATTACGAGCGAGCGGACGACGAAACGTTCAATGGAAAACAGAAGCCAAATGTGAATGTTGTCAATTTGTTTGACAAAGATTATTCAGTGGTCACCATTCAATGCAAGGATAGACCAAAACTTCTGTTTGATACGGTTTGTACATTGACTGATATGCAATATGTTGTTTTTCATGCCAATGTTGATGCTGAAGGGCCAGAGGCTTATCAGGAATATTATATTAGGCACATAGATGGATCTCCTGTGAATTCAGAAGCTGAGAGACAAAGGTTGATACAATGTCTTGGAGCTGCCATTGAAAGACGAGTATCCGAGGGATTGAAGCTTGAGCTATGCACTACTGATAGAGTTGGGCTACTCTCTGATGTCACACGCATATTCAGAGAGAATAGCTTGAGTGTGAGTCGAGCCGAAGTTAGAACGGAAGGAGGCAATGCAATGAATACATTTTACGTGCGCGATGCGTCGGGTTATCCTATCGATTCAAAGACGATAGATTCGATAAGGCAAGTGATTGGTCAGTCCATATTGAAGGTGAAAGGCAGCCCTGATGAAGGGAAATCTGATTCACAAGACTCTCCAAGTAGGTTCCTGTTTGGTGGTCTGTTTAAGTCAAGATCTTTAGTGAATTTTGGATTGGTTAGATCATATTCTTGA 1347 42.46 MNMSFSNDMGDEYQKFIKRMNPPRVVIDNKSCKNATVVRVDSANKHGILLEVVQVLTDLNLIITKAYISSDGNWFMDVFNVTDQNGNKVMDEGILDYIQSSLGPDSCCSSSMRSVGVESSTDHTVIELVGCDRPGLLSEVTAVLTHLKCSVERAEVWTHNTRVAAVMHVSDEEASVTGSAVTDLERLSTIKKLLCNVLKGSNKCRGAKTVFSHEAIHTERRLHQMMFADRDYERADDETFNGKQKPNVNVVNLFDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVNSEAERQRLIQCLGAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVSRAEVRTEGGNAMNTFYVRDASGYPIDSKTIDSIRQVIGQSILKVKGSPDEGKSDSQDSPSRFLFGGLFKSRSLVNFGLVRSYS 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1345306 1350049 - Cp4.1LG09g02380.1 Cpe09g00233 474599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe09g00233 448 CDD ACT_ACR_3 258 332 - -
Cpe09g00233 448 PANTHER BNAC06G29950D PROTEIN 4 446 - -
Cpe09g00233 448 ProSiteProfiles ACT domain profile. 338 414 IPR002912 -
Cpe09g00233 448 CDD ACT_ACR_1 35 104 - -
Cpe09g00233 448 Pfam ACT domain 36 87 IPR002912 -
Cpe09g00233 448 Pfam ACT domain 344 389 IPR002912 -
Cpe09g00233 448 Pfam ACT domain 132 180 IPR002912 -
Cpe09g00233 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 446 IPR040217 -
Cpe09g00233 448 SUPERFAMILY ACT-like 334 401 IPR045865 -
Cpe09g00233 448 ProSiteProfiles ACT domain profile. 125 212 IPR002912 -
Cpe09g00233 448 Gene3D - 119 198 - -
Cpe09g00233 448 CDD ACT_ACR_4 336 407 - -
Cpe09g00233 448 SUPERFAMILY ACT-like 120 189 IPR045865 -
Cpe09g00233 448 SUPERFAMILY ACT-like 32 100 IPR045865 -
Cpe09g00233 448 ProSiteProfiles ACT domain profile. 37 117 IPR002912 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00095 Cpe09g00233 CCT
Cpe07g00095 Cpe09g00233 ECH
Cpe01g01517 Cpe09g00233 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02587 Cpe-Chr1:21000272 Cpe09g00233 Cpe-Chr9:1345306 2.15E-174 dispersed
Cpe07g00095 Cpe-Chr7:481898 Cpe09g00233 Cpe-Chr9:1345306 0 dispersed
Cpe08g00775 Cpe-Chr8:6183064 Cpe09g00233 Cpe-Chr9:1345306 5.15E-158 dispersed
Cpe09g00233 Cpe-Chr9:1345306 Cpe13g01131 Cpe-Chr13:9014946 2.45E-175 dispersed
Cpe09g00233 Cpe-Chr9:1345306 Cpe01g00982 Cpe-Chr1:5827855 4.95E-178 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe09g00233 - - mnt:21409131 738.028